RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 SCN4AP35499 1836 aa34.05■■■■□ 3.04
RNF220-216ENST00000488865 PCNTO95613 3336 aa34.04■■■■□ 3.04
RNF220-216ENST00000488865 GRIPAP1Q4V328 841 aa34.04■■■■□ 3.04
RNF220-216ENST00000488865 CRAMP1Q96RY5 1269 aa34.04■■■■□ 3.04
RNF220-216ENST00000488865 PROSER3Q2NL68 480 aa34.03■■■■□ 3.04
RNF220-216ENST00000488865 CCDC146Q8IYE0 955 aa34.03■■■■□ 3.04
RNF220-216ENST00000488865 RUNDC1Q96C34 613 aa34.03■■■■□ 3.04
RNF220-216ENST00000488865 RBM17Q96I25 401 aaKnown RBP34.03■■■■□ 3.04
RNF220-216ENST00000488865 TAF1DQ9H5J8 278 aaPredicted RBP34.02■■■■□ 3.04
RNF220-216ENST00000488865 ZNF541Q9H0D2 1346 aa34.02■■■■□ 3.04
RNF220-216ENST00000488865 FZD9O00144 591 aa34.01■■■■□ 3.03
RNF220-216ENST00000488865 CHL1O00533 1208 aa34.01■■■■□ 3.03
RNF220-216ENST00000488865 POTEIP0CG38 1075 aa34.01■■■■□ 3.03
RNF220-216ENST00000488865 POTEJP0CG39 1038 aa34.01■■■■□ 3.03
RNF220-216ENST00000488865 WDR43Q15061 677 aaKnown RBP eCLIP34.01■■■■□ 3.03
RNF220-216ENST00000488865 NEUROD2Q15784 382 aa34.01■■■■□ 3.03
RNF220-216ENST00000488865 LDHDQ86WU2 507 aa34■■■■□ 3.03
RNF220-216ENST00000488865 ANXA1P04083 346 aa33.99■■■■□ 3.03
RNF220-216ENST00000488865 SLC10A5Q5PT55 438 aa33.99■■■■□ 3.03
RNF220-216ENST00000488865 NLRP3Q96P20 1036 aa33.99■■■■□ 3.03
RNF220-216ENST00000488865 UTP14AQ9BVJ6 771 aaKnown RBP33.99■■■■□ 3.03
RNF220-216ENST00000488865 TRIM35Q9UPQ4 493 aa33.99■■■■□ 3.03
RNF220-216ENST00000488865 HSP90AB3PQ58FF7 597 aa33.98■■■■□ 3.03
RNF220-216ENST00000488865 JDP2Q8WYK2 163 aa33.98■■■■□ 3.03
RNF220-216ENST00000488865 RNF123Q5XPI4 1314 aa33.98■■■■□ 3.03
RNF220-216ENST00000488865 COPS6Q7L5N1 327 aa33.97■■■■□ 3.03
RNF220-216ENST00000488865 HACL1Q9UJ83 578 aa33.97■■■■□ 3.03
RNF220-216ENST00000488865 C3orf67Q6ZVT6 689 aa33.96■■■■□ 3.03
RNF220-216ENST00000488865 NECTIN2Q92692 538 aa33.96■■■■□ 3.03
RNF220-216ENST00000488865 DDX21Q9NR30 783 aaKnown RBP eCLIP33.96■■■■□ 3.03
RNF220-216ENST00000488865 CREBZFQ9NS37 354 aa33.96■■■■□ 3.03
RNF220-216ENST00000488865 PPEF1O14829 653 aaPredicted RBP33.95■■■■□ 3.03
RNF220-216ENST00000488865 GPC2Q8N158 579 aa33.95■■■■□ 3.03
RNF220-216ENST00000488865 XAGE3Q8WTP9 111 aa33.95■■■■□ 3.03
RNF220-216ENST00000488865 ADAMTS8Q9UP79 889 aa33.95■■■■□ 3.03
RNF220-216ENST00000488865 ANKRD36CQ5JPF3 1778 aa33.93■■■■□ 3.02
RNF220-216ENST00000488865 AIMP1Q12904 312 aaKnown RBP33.93■■■■□ 3.02
RNF220-216ENST00000488865 LAS1LQ9Y4W2 734 aaKnown RBP33.93■■■■□ 3.02
RNF220-216ENST00000488865 KRT24Q2M2I5 525 aa33.92■■■■□ 3.02
RNF220-216ENST00000488865 NLRP10Q86W26 655 aa33.92■■■■□ 3.02
RNF220-216ENST00000488865 PASKQ96RG2 1323 aa33.91■■■■□ 3.02
RNF220-216ENST00000488865 HOXB7P09629 217 aa33.91■■■■□ 3.02
RNF220-216ENST00000488865 EPHX2P34913 555 aa33.91■■■■□ 3.02
RNF220-216ENST00000488865 EIF6P56537 245 aaKnown RBP33.91■■■■□ 3.02
RNF220-216ENST00000488865 TCIRG1Q13488 830 aa33.91■■■■□ 3.02
RNF220-216ENST00000488865 PNMA8AQ86V59 439 aaPredicted RBP33.9■■■■□ 3.02
RNF220-216ENST00000488865 TMX4Q9H1E5 349 aaPredicted RBP33.9■■■■□ 3.02
RNF220-216ENST00000488865 ATP6V0A2Q9Y487 856 aa33.9■■■■□ 3.02
RNF220-216ENST00000488865 EAPPQ56P03 285 aaPredicted RBP33.89■■■■□ 3.02
RNF220-216ENST00000488865 PRKRIP1Q9H875 184 aaPredicted RBP33.89■■■■□ 3.02
RNF220-216ENST00000488865 COL4A5P29400 1685 aa33.89■■■■□ 3.02
RNF220-216ENST00000488865 LARGE2Q8N3Y3 721 aa33.88■■■■□ 3.01
RNF220-216ENST00000488865 TCERG1O14776 1098 aaKnown RBP33.87■■■■□ 3.01
RNF220-216ENST00000488865 CFAP44Q96MT7 982 aa33.87■■■■□ 3.01
RNF220-216ENST00000488865 VPS33BQ9H267 617 aa33.87■■■■□ 3.01
RNF220-216ENST00000488865 CHPF2Q9P2E5 772 aa33.87■■■■□ 3.01
RNF220-216ENST00000488865 ADAMTSL1Q8N6G6 1762 aa33.87■■■■□ 3.01
RNF220-216ENST00000488865 ITGBL1O95965 494 aaPredicted RBP33.86■■■■□ 3.01
RNF220-216ENST00000488865 HDGFL1Q5TGJ6 251 aa33.86■■■■□ 3.01
RNF220-216ENST00000488865 ABCC4O15439 1325 aa33.85■■■■□ 3.01
RNF220-216ENST00000488865 BBOX1O75936 387 aa33.85■■■■□ 3.01
RNF220-216ENST00000488865 SLC51AQ86UW1 340 aa33.85■■■■□ 3.01
RNF220-216ENST00000488865 TRMT112Q9UI30 125 aaKnown RBP33.85■■■■□ 3.01
RNF220-216ENST00000488865 CLEC11AQ9Y240 323 aa33.85■■■■□ 3.01
RNF220-216ENST00000488865 PLBD2Q8NHP8 589 aa33.84■■■■□ 3.01
RNF220-216ENST00000488865 DBF4Q9UBU7 674 aaPredicted RBP33.84■■■■□ 3.01
RNF220-216ENST00000488865 GJA3Q9Y6H8 435 aa33.84■■■■□ 3.01
RNF220-216ENST00000488865 SH3TC1Q8TE82 1336 aa33.83■■■■□ 3.01
RNF220-216ENST00000488865 HCLS1P14317 486 aaPredicted RBP33.83■■■■□ 3.01
RNF220-216ENST00000488865 LAMB2P55268 1798 aa33.83■■■■□ 3.01
RNF220-216ENST00000488865 HSPA1AP0DMV8 641 aaKnown RBP33.82■■■■□ 3
RNF220-216ENST00000488865 HSPA1BP0DMV9 641 aaKnown RBP33.82■■■■□ 3
RNF220-216ENST00000488865 COL13A1Q5TAT6 717 aaPredicted RBP33.82■■■■□ 3
RNF220-216ENST00000488865 NIM1KQ8IY84 436 aa33.82■■■■□ 3
RNF220-216ENST00000488865 MKRN1Q9UHC7 482 aaKnown RBP33.82■■■■□ 3
RNF220-216ENST00000488865 PPIP5K2O43314 1243 aa33.81■■■■□ 3
RNF220-216ENST00000488865 ANKRD13DQ6ZTN6 518 aa33.81■■■■□ 3
RNF220-216ENST00000488865 SP8Q8IXZ3 490 aa33.81■■■■□ 3
RNF220-216ENST00000488865 SUPT20HQ8NEM7 779 aa33.81■■■■□ 3
RNF220-216ENST00000488865 RTFDC1Q9BY42 306 aaPredicted RBP33.81■■■■□ 3
RNF220-216ENST00000488865 LMOD1P29536 600 aaPredicted RBP33.8■■■■□ 3
RNF220-216ENST00000488865 DDX46Q7L014 1031 aaKnown RBP33.8■■■■□ 3
RNF220-216ENST00000488865 TMEM88BA6NKF7 163 aa33.79■■■■□ 3
RNF220-216ENST00000488865 DUSP27Q5VZP5 1158 aa33.79■■■■□ 3
RNF220-216ENST00000488865 CNTROBQ8N137 903 aa33.79■■■■□ 3
RNF220-216ENST00000488865 HYPKQ9NX55 129 aa33.79■■■■□ 3
RNF220-216ENST00000488865 CNTNAP1P78357 1384 aa33.79■■■■□ 3
RNF220-216ENST00000488865 AOC3Q16853 763 aa33.78■■■■□ 3
RNF220-216ENST00000488865 MBIPQ9NS73 344 aa33.78■■■■□ 3
RNF220-216ENST00000488865 ZNF853P0CG23 659 aa33.77■■■■□ 3
RNF220-216ENST00000488865 SCNN1DP51172 638 aa33.77■■■■□ 3
RNF220-216ENST00000488865 GRAPQ13588 217 aa33.77■■■■□ 3
RNF220-216ENST00000488865 GRAPLQ8TC17 118 aaPredicted RBP33.77■■■■□ 3
RNF220-216ENST00000488865 ISCA1Q9BUE6 129 aa33.77■■■■□ 3
RNF220-216ENST00000488865 LTBP1Q14766 1721 aa33.76■■■■□ 3
RNF220-216ENST00000488865 MAP1SQ66K74 1059 aaPredicted RBP33.76■■■□□ 2.99
RNF220-216ENST00000488865 DPP8Q6V1X1 898 aaPredicted RBP33.76■■■□□ 2.99
RNF220-216ENST00000488865 TMC4Q7Z404 712 aa33.75■■■□□ 2.99
RNF220-216ENST00000488865 MPNDQ8N594 471 aa33.75■■■□□ 2.99
RNF220-216ENST00000488865 APAF1O14727 1248 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms