RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 IBTKQ9P2D0 1353 aaPredicted RBP22.33■■□□□ 1.17
ITSN1-230ENST00000488166 TCERG1O14776 1098 aaKnown RBP22.32■■□□□ 1.16
ITSN1-230ENST00000488166 CC2D2BQ6DHV5 1058 aa22.32■■□□□ 1.16
ITSN1-230ENST00000488166 ZNF34Q8IZ26 560 aa22.32■■□□□ 1.16
ITSN1-230ENST00000488166 RBM17Q96I25 401 aaKnown RBP22.32■■□□□ 1.16
ITSN1-230ENST00000488166 PSMD1Q99460 953 aa22.32■■□□□ 1.16
ITSN1-230ENST00000488166 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
ITSN1-230ENST00000488166 RIC1Q4ADV7 1423 aa22.31■■□□□ 1.16
ITSN1-230ENST00000488166 EPHX2P34913 555 aa22.31■■□□□ 1.16
ITSN1-230ENST00000488166 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
ITSN1-230ENST00000488166 RALBP1Q15311 655 aa22.31■■□□□ 1.16
ITSN1-230ENST00000488166 FZD9O00144 591 aa22.3■■□□□ 1.16
ITSN1-230ENST00000488166 PPEF1O14829 653 aaPredicted RBP22.3■■□□□ 1.16
ITSN1-230ENST00000488166 NTSR2O95665 410 aa22.3■■□□□ 1.16
ITSN1-230ENST00000488166 EIF6P56537 245 aaKnown RBP22.3■■□□□ 1.16
ITSN1-230ENST00000488166 PARP10Q53GL7 1025 aa22.3■■□□□ 1.16
ITSN1-230ENST00000488166 TNS4Q8IZW8 715 aa22.3■■□□□ 1.16
ITSN1-230ENST00000488166 LAMB2P55268 1798 aa22.3■■□□□ 1.16
ITSN1-230ENST00000488166 ANXA1P04083 346 aa22.29■■□□□ 1.16
ITSN1-230ENST00000488166 HOXA10P31260 410 aaPredicted RBP22.29■■□□□ 1.16
ITSN1-230ENST00000488166 TMPOP42166 694 aaKnown RBP22.29■■□□□ 1.16
ITSN1-230ENST00000488166 NEUROD2Q15784 382 aa22.29■■□□□ 1.16
ITSN1-230ENST00000488166 GPC2Q8N158 579 aa22.29■■□□□ 1.16
ITSN1-230ENST00000488166 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
ITSN1-230ENST00000488166 NLRP3Q96P20 1036 aa22.29■■□□□ 1.16
ITSN1-230ENST00000488166 TMX4Q9H1E5 349 aaPredicted RBP22.29■■□□□ 1.16
ITSN1-230ENST00000488166 GJA3Q9Y6H8 435 aa22.29■■□□□ 1.16
ITSN1-230ENST00000488166 ADAMTSL1Q8N6G6 1762 aa22.28■■□□□ 1.16
ITSN1-230ENST00000488166 PNMA8AQ86V59 439 aaPredicted RBP22.28■■□□□ 1.16
ITSN1-230ENST00000488166 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
ITSN1-230ENST00000488166 SNED1Q8TER0 1413 aa22.28■■□□□ 1.16
ITSN1-230ENST00000488166 CAPN15O75808 1086 aa22.27■■□□□ 1.16
ITSN1-230ENST00000488166 AIMP1Q12904 312 aaKnown RBP22.27■■□□□ 1.16
ITSN1-230ENST00000488166 GRIPAP1Q4V328 841 aa22.27■■□□□ 1.16
ITSN1-230ENST00000488166 LARGE2Q8N3Y3 721 aa22.27■■□□□ 1.16
ITSN1-230ENST00000488166 UTP14AQ9BVJ6 771 aaKnown RBP22.27■■□□□ 1.16
ITSN1-230ENST00000488166 BABAM1Q9NWV8 329 aa22.27■■□□□ 1.16
ITSN1-230ENST00000488166 PASKQ96RG2 1323 aa22.27■■□□□ 1.16
ITSN1-230ENST00000488166 TMEM88BA6NKF7 163 aa22.26■■□□□ 1.15
ITSN1-230ENST00000488166 PDIA6Q15084 440 aa22.26■■□□□ 1.15
ITSN1-230ENST00000488166 PROSER3Q2NL68 480 aa22.26■■□□□ 1.15
ITSN1-230ENST00000488166 CCDC146Q8IYE0 955 aa22.26■■□□□ 1.15
ITSN1-230ENST00000488166 LAS1LQ9Y4W2 734 aaKnown RBP22.26■■□□□ 1.15
ITSN1-230ENST00000488166 COL4A5P29400 1685 aa22.26■■□□□ 1.15
ITSN1-230ENST00000488166 LMOD1P29536 600 aaPredicted RBP22.25■■□□□ 1.15
ITSN1-230ENST00000488166 C3orf67Q6ZVT6 689 aa22.25■■□□□ 1.15
ITSN1-230ENST00000488166 CNTNAP1P78357 1384 aa22.25■■□□□ 1.15
ITSN1-230ENST00000488166 ITGBL1O95965 494 aaPredicted RBP22.24■■□□□ 1.15
ITSN1-230ENST00000488166 DDX10Q13206 875 aaKnown RBP22.24■■□□□ 1.15
ITSN1-230ENST00000488166 MAP1SQ66K74 1059 aaPredicted RBP22.24■■□□□ 1.15
ITSN1-230ENST00000488166 COPS6Q7L5N1 327 aa22.24■■□□□ 1.15
ITSN1-230ENST00000488166 LRP10Q7Z4F1 713 aa22.24■■□□□ 1.15
ITSN1-230ENST00000488166 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
ITSN1-230ENST00000488166 WDR43Q15061 677 aaKnown RBP eCLIP22.23■■□□□ 1.15
ITSN1-230ENST00000488166 HSP90AB3PQ58FF7 597 aa22.23■■□□□ 1.15
ITSN1-230ENST00000488166 SLC51AQ86UW1 340 aa22.23■■□□□ 1.15
ITSN1-230ENST00000488166 NIM1KQ8IY84 436 aa22.23■■□□□ 1.15
ITSN1-230ENST00000488166 CNTROBQ8N137 903 aa22.23■■□□□ 1.15
ITSN1-230ENST00000488166 TAF1P21675 1872 aa22.23■■□□□ 1.15
ITSN1-230ENST00000488166 LTBP1Q14766 1721 aa22.23■■□□□ 1.15
ITSN1-230ENST00000488166 PPIP5K2O43314 1243 aa22.22■■□□□ 1.15
ITSN1-230ENST00000488166 XAGE3Q8WTP9 111 aa22.22■■□□□ 1.15
ITSN1-230ENST00000488166 AOC3Q16853 763 aa22.2■■□□□ 1.14
ITSN1-230ENST00000488166 SLC10A5Q5PT55 438 aa22.2■■□□□ 1.14
ITSN1-230ENST00000488166 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
ITSN1-230ENST00000488166 ABCC4O15439 1325 aa22.2■■□□□ 1.14
ITSN1-230ENST00000488166 TRPM7Q96QT4 1865 aa22.2■■□□□ 1.14
ITSN1-230ENST00000488166 KRT24Q2M2I5 525 aa22.19■■□□□ 1.14
ITSN1-230ENST00000488166 NLRP10Q86W26 655 aa22.19■■□□□ 1.14
ITSN1-230ENST00000488166 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
ITSN1-230ENST00000488166 DDX21Q9NR30 783 aaKnown RBP eCLIP22.19■■□□□ 1.14
ITSN1-230ENST00000488166 TRMT112Q9UI30 125 aaKnown RBP22.19■■□□□ 1.14
ITSN1-230ENST00000488166 HCLS1P14317 486 aaPredicted RBP22.18■■□□□ 1.14
ITSN1-230ENST00000488166 EPS15P42566 896 aa22.18■■□□□ 1.14
ITSN1-230ENST00000488166 VEGFBP49765 207 aa22.18■■□□□ 1.14
ITSN1-230ENST00000488166 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
ITSN1-230ENST00000488166 SUPT20HQ8NEM7 779 aa22.18■■□□□ 1.14
ITSN1-230ENST00000488166 CHL1O00533 1208 aa22.17■■□□□ 1.14
ITSN1-230ENST00000488166 SCNN1DP51172 638 aa22.17■■□□□ 1.14
ITSN1-230ENST00000488166 DDX46Q7L014 1031 aaKnown RBP22.17■■□□□ 1.14
ITSN1-230ENST00000488166 ZNF428Q96B54 188 aa22.17■■□□□ 1.14
ITSN1-230ENST00000488166 AIDAQ96BJ3 306 aa22.17■■□□□ 1.14
ITSN1-230ENST00000488166 ABT1Q9ULW3 272 aaKnown RBP22.17■■□□□ 1.14
ITSN1-230ENST00000488166 SH3TC1Q8TE82 1336 aa22.16■■□□□ 1.14
ITSN1-230ENST00000488166 DEFB115Q30KQ5 88 aa22.16■■□□□ 1.14
ITSN1-230ENST00000488166 HDGFL1Q5TGJ6 251 aa22.16■■□□□ 1.14
ITSN1-230ENST00000488166 DPP8Q6V1X1 898 aaPredicted RBP22.16■■□□□ 1.14
ITSN1-230ENST00000488166 VPS33BQ9H267 617 aa22.16■■□□□ 1.14
ITSN1-230ENST00000488166 CHPF2Q9P2E5 772 aa22.16■■□□□ 1.14
ITSN1-230ENST00000488166 DDX60Q8IY21 1712 aaKnown RBP22.16■■□□□ 1.14
ITSN1-230ENST00000488166 FOXN1O15353 648 aa22.15■■□□□ 1.14
ITSN1-230ENST00000488166 BBOX1O75936 387 aa22.15■■□□□ 1.14
ITSN1-230ENST00000488166 SP8Q8IXZ3 490 aa22.15■■□□□ 1.14
ITSN1-230ENST00000488166 MPNDQ8N594 471 aa22.15■■□□□ 1.14
ITSN1-230ENST00000488166 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
ITSN1-230ENST00000488166 USP50Q70EL3 339 aaPredicted RBP22.14■■□□□ 1.13
ITSN1-230ENST00000488166 GRAPQ13588 217 aa22.13■■□□□ 1.13
ITSN1-230ENST00000488166 GRAPLQ8TC17 118 aaPredicted RBP22.13■■□□□ 1.13
ITSN1-230ENST00000488166 ZNRF3Q9ULT6 936 aa22.13■■□□□ 1.13
ITSN1-230ENST00000488166 ADAMTS8Q9UP79 889 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms