RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HDGFL1Q5TGJ6 251 aa14.73□□□□□ -0.05
NIPAL3-207ENST00000488155 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
NIPAL3-207ENST00000488155 PPP1R42Q7Z4L9 355 aa14.73□□□□□ -0.05
NIPAL3-207ENST00000488155 SLC51AQ86UW1 340 aa14.73□□□□□ -0.05
NIPAL3-207ENST00000488155 DDX21Q9NR30 783 aaKnown RBP eCLIP14.73□□□□□ -0.05
NIPAL3-207ENST00000488155 POTECB2RU33 542 aa14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 ELL2O00472 640 aaPredicted RBP14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 APLP1P51693 650 aa14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 FKBP4Q02790 459 aaKnown RBP eCLIP14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 UTP14AQ9BVJ6 771 aaKnown RBP14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 MBIPQ9NS73 344 aa14.72□□□□□ -0.05
NIPAL3-207ENST00000488155 SCN4AP35499 1836 aa14.71□□□□□ -0.05
NIPAL3-207ENST00000488155 ZEB1P37275 1124 aaPredicted RBP14.71□□□□□ -0.05
NIPAL3-207ENST00000488155 CRY2Q49AN0 593 aa14.71□□□□□ -0.05
NIPAL3-207ENST00000488155 PARP10Q53GL7 1025 aa14.71□□□□□ -0.05
NIPAL3-207ENST00000488155 DUSP27Q5VZP5 1158 aa14.71□□□□□ -0.05
NIPAL3-207ENST00000488155 SYNE4Q8N205 404 aa14.71□□□□□ -0.05
NIPAL3-207ENST00000488155 IBTKQ9P2D0 1353 aaPredicted RBP14.71□□□□□ -0.06
NIPAL3-207ENST00000488155 FSTL1Q12841 308 aa14.7□□□□□ -0.06
NIPAL3-207ENST00000488155 RTKN2Q8IZC4 609 aa14.7□□□□□ -0.06
NIPAL3-207ENST00000488155 SMC1BQ8NDV3 1235 aa14.7□□□□□ -0.06
NIPAL3-207ENST00000488155 RBM17Q96I25 401 aaKnown RBP14.7□□□□□ -0.06
NIPAL3-207ENST00000488155 NLRP3Q96P20 1036 aa14.7□□□□□ -0.06
NIPAL3-207ENST00000488155 DDX60Q8IY21 1712 aaKnown RBP14.69□□□□□ -0.06
NIPAL3-207ENST00000488155 HCLS1P14317 486 aaPredicted RBP14.69□□□□□ -0.06
NIPAL3-207ENST00000488155 TCIRG1Q13488 830 aa14.69□□□□□ -0.06
NIPAL3-207ENST00000488155 HSP90AB3PQ58FF7 597 aa14.69□□□□□ -0.06
NIPAL3-207ENST00000488155 NLRP10Q86W26 655 aa14.69□□□□□ -0.06
NIPAL3-207ENST00000488155 HOXA10P31260 410 aaPredicted RBP14.68□□□□□ -0.06
NIPAL3-207ENST00000488155 IARSP41252 1262 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-207ENST00000488155 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
NIPAL3-207ENST00000488155 ZNF541Q9H0D2 1346 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 RIC1Q4ADV7 1423 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 ATP5J2-PTCD1G3V325 749 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 PPEF1O14829 653 aaPredicted RBP14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 ZNF853P0CG23 659 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 POTEJP0CG39 1038 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 GNAI1P63096 354 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 ANKRD13DQ6ZTN6 518 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 CRAMP1Q96RY5 1269 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 DBF4Q9UBU7 674 aaPredicted RBP14.67□□□□□ -0.06
NIPAL3-207ENST00000488155 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
NIPAL3-207ENST00000488155 HOXB7P09629 217 aa14.66□□□□□ -0.06
NIPAL3-207ENST00000488155 RTL5Q5HYW3 569 aaPredicted RBP14.66□□□□□ -0.06
NIPAL3-207ENST00000488155 SLC10A5Q5PT55 438 aa14.66□□□□□ -0.06
NIPAL3-207ENST00000488155 DNAJC5GQ8N7S2 189 aa14.66□□□□□ -0.06
NIPAL3-207ENST00000488155 ABCC4O15439 1325 aa14.66□□□□□ -0.06
NIPAL3-207ENST00000488155 COL4A5P29400 1685 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 C8orf58Q8NAV2 365 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 PLBD2Q8NHP8 589 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 PHAXQ9H814 394 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 HYPKQ9NX55 129 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 CACNA1FO60840 1977 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 SNED1Q8TER0 1413 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 SH3TC1Q8TE82 1336 aa14.65□□□□□ -0.06
NIPAL3-207ENST00000488155 CALD1Q05682 793 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 CC2D2BQ6DHV5 1058 aa14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 LARGE2Q8N3Y3 721 aa14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 TSR2Q969E8 191 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 FAM89AQ96GI7 184 aa14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 PSMD1Q99460 953 aa14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
NIPAL3-207ENST00000488155 ANP32CO43423 234 aa14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 EAPPQ56P03 285 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 RIC3Q7Z5B4 369 aa14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 ISCA1Q9BUE6 129 aa14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 TMX4Q9H1E5 349 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 GJA3Q9Y6H8 435 aa14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 POLR2AP24928 1970 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 RNF123Q5XPI4 1314 aa14.63□□□□□ -0.07
NIPAL3-207ENST00000488155 FZD9O00144 591 aa14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 TSPYL6Q8N831 410 aa14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 ATP6V0A2Q9Y487 856 aa14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 MYH3P11055 1940 aa14.62□□□□□ -0.07
NIPAL3-207ENST00000488155 IQCA1LA6NCM1 817 aa14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 PPIP5K2O43314 1243 aa14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 EIF6P56537 245 aaKnown RBP14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 JARID2Q92833 1246 aaPredicted RBP14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 KLRG1Q96E93 195 aa14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 MYD88Q99836 296 aa14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 HACL1Q9UJ83 578 aa14.61□□□□□ -0.07
NIPAL3-207ENST00000488155 SPEF2Q9C093 1822 aa14.6□□□□□ -0.07
NIPAL3-207ENST00000488155 AOC3Q16853 763 aa14.6□□□□□ -0.07
NIPAL3-207ENST00000488155 LTBP1Q14766 1721 aa14.6□□□□□ -0.07
NIPAL3-207ENST00000488155 COL4A1P02462 1669 aa14.59□□□□□ -0.07
NIPAL3-207ENST00000488155 BBOX1O75936 387 aa14.59□□□□□ -0.07
NIPAL3-207ENST00000488155 EPHX2P34913 555 aa14.59□□□□□ -0.07
NIPAL3-207ENST00000488155 GRAPQ13588 217 aa14.59□□□□□ -0.07
NIPAL3-207ENST00000488155 CCDC30Q5VVM6 783 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms