RNA–Protein interactions for RNA: ENST00000487451.1

TFE3-203, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 3

Gene TFE3, Length 1,058 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-203ENST00000487451 PDIA6Q15084 440 aa21.83■■□□□ 1.09
TFE3-203ENST00000487451 PROSER3Q2NL68 480 aa21.83■■□□□ 1.09
TFE3-203ENST00000487451 CREBZFQ9NS37 354 aa21.83■■□□□ 1.09
TFE3-203ENST00000487451 TSPYL4Q9UJ04 414 aa21.83■■□□□ 1.09
TFE3-203ENST00000487451 RNF123Q5XPI4 1314 aa21.82■■□□□ 1.08
TFE3-203ENST00000487451 FZD9O00144 591 aa21.82■■□□□ 1.08
TFE3-203ENST00000487451 LDHDQ86WU2 507 aa21.82■■□□□ 1.08
TFE3-203ENST00000487451 EAPPQ56P03 285 aaPredicted RBP21.81■■□□□ 1.08
TFE3-203ENST00000487451 GIGYF2Q6Y7W6 1299 aaKnown RBP21.81■■□□□ 1.08
TFE3-203ENST00000487451 PSMD1Q99460 953 aa21.81■■□□□ 1.08
TFE3-203ENST00000487451 EIF2S2P20042 333 aaKnown RBP21.8■■□□□ 1.08
TFE3-203ENST00000487451 HOXA10P31260 410 aaPredicted RBP21.8■■□□□ 1.08
TFE3-203ENST00000487451 RIPK4P57078 832 aa21.8■■□□□ 1.08
TFE3-203ENST00000487451 RPGRQ92834 1020 aaKnown RBP21.8■■□□□ 1.08
TFE3-203ENST00000487451 HACL1Q9UJ83 578 aa21.8■■□□□ 1.08
TFE3-203ENST00000487451 ERBB4Q15303 1308 aa21.8■■□□□ 1.08
TFE3-203ENST00000487451 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
TFE3-203ENST00000487451 ITGBL1O95965 494 aaPredicted RBP21.79■■□□□ 1.08
TFE3-203ENST00000487451 EPHX2P34913 555 aa21.79■■□□□ 1.08
TFE3-203ENST00000487451 TMPOP42166 694 aaKnown RBP21.78■■□□□ 1.08
TFE3-203ENST00000487451 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
TFE3-203ENST00000487451 PNNQ9H307 717 aaKnown RBP21.78■■□□□ 1.08
TFE3-203ENST00000487451 TAF1P21675 1872 aa21.77■■□□□ 1.08
TFE3-203ENST00000487451 CNTNAP1P78357 1384 aa21.77■■□□□ 1.08
TFE3-203ENST00000487451 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
TFE3-203ENST00000487451 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
TFE3-203ENST00000487451 CAPN15O75808 1086 aa21.76■■□□□ 1.07
TFE3-203ENST00000487451 CCDC146Q8IYE0 955 aa21.76■■□□□ 1.07
TFE3-203ENST00000487451 TNS4Q8IZW8 715 aa21.76■■□□□ 1.07
TFE3-203ENST00000487451 GPC2Q8N158 579 aa21.76■■□□□ 1.07
TFE3-203ENST00000487451 MAP1SQ66K74 1059 aaPredicted RBP21.75■■□□□ 1.07
TFE3-203ENST00000487451 RBM17Q96I25 401 aaKnown RBP21.75■■□□□ 1.07
TFE3-203ENST00000487451 CRAMP1Q96RY5 1269 aa21.75■■□□□ 1.07
TFE3-203ENST00000487451 CLEC11AQ9Y240 323 aa21.75■■□□□ 1.07
TFE3-203ENST00000487451 RALBP1Q15311 655 aa21.74■■□□□ 1.07
TFE3-203ENST00000487451 PPP1R42Q7Z4L9 355 aa21.74■■□□□ 1.07
TFE3-203ENST00000487451 JDP2Q8WYK2 163 aa21.74■■□□□ 1.07
TFE3-203ENST00000487451 GJA3Q9Y6H8 435 aa21.74■■□□□ 1.07
TFE3-203ENST00000487451 DDX60Q8IY21 1712 aaKnown RBP21.73■■□□□ 1.07
TFE3-203ENST00000487451 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
TFE3-203ENST00000487451 PARP10Q53GL7 1025 aa21.73■■□□□ 1.07
TFE3-203ENST00000487451 CC2D2BQ6DHV5 1058 aa21.73■■□□□ 1.07
TFE3-203ENST00000487451 ZNF428Q96B54 188 aa21.73■■□□□ 1.07
TFE3-203ENST00000487451 ABCC4O15439 1325 aa21.73■■□□□ 1.07
TFE3-203ENST00000487451 TMEM88BA6NKF7 163 aa21.72■■□□□ 1.07
TFE3-203ENST00000487451 SCNN1DP51172 638 aa21.72■■□□□ 1.07
TFE3-203ENST00000487451 AIMP1Q12904 312 aaKnown RBP21.72■■□□□ 1.07
TFE3-203ENST00000487451 COPS6Q7L5N1 327 aa21.72■■□□□ 1.07
TFE3-203ENST00000487451 LARGE2Q8N3Y3 721 aa21.72■■□□□ 1.07
TFE3-203ENST00000487451 XAGE3Q8WTP9 111 aa21.72■■□□□ 1.07
TFE3-203ENST00000487451 UTP14AQ9BVJ6 771 aaKnown RBP21.72■■□□□ 1.07
TFE3-203ENST00000487451 VEGFBP49765 207 aa21.71■■□□□ 1.07
TFE3-203ENST00000487451 EIF6P56537 245 aaKnown RBP21.71■■□□□ 1.07
TFE3-203ENST00000487451 FMR1Q06787 632 aaKnown RBP eCLIP21.71■■□□□ 1.07
TFE3-203ENST00000487451 CNTROBQ8N137 903 aa21.71■■□□□ 1.07
TFE3-203ENST00000487451 COL4A1P02462 1669 aa21.71■■□□□ 1.07
TFE3-203ENST00000487451 FOXN1O15353 648 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 EPS15P42566 896 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
TFE3-203ENST00000487451 AOC3Q16853 763 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 SLC10A5Q5PT55 438 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 PNMA8AQ86V59 439 aaPredicted RBP21.7■■□□□ 1.06
TFE3-203ENST00000487451 NLRP3Q96P20 1036 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 BABAM1Q9NWV8 329 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
TFE3-203ENST00000487451 MYBBP1AQ9BQG0 1328 aaKnown RBP21.7■■□□□ 1.06
TFE3-203ENST00000487451 HCLS1P14317 486 aaPredicted RBP21.69■■□□□ 1.06
TFE3-203ENST00000487451 LMOD3Q0VAK6 560 aa21.69■■□□□ 1.06
TFE3-203ENST00000487451 NLRP10Q86W26 655 aa21.69■■□□□ 1.06
TFE3-203ENST00000487451 ATP6V0A2Q9Y487 856 aa21.69■■□□□ 1.06
TFE3-203ENST00000487451 DUOX1Q9NRD9 1551 aa21.69■■□□□ 1.06
TFE3-203ENST00000487451 CHL1O00533 1208 aa21.68■■□□□ 1.06
TFE3-203ENST00000487451 PPIP5K2O43314 1243 aa21.68■■□□□ 1.06
TFE3-203ENST00000487451 LRRC37AA6NMS7 1700 aa21.68■■□□□ 1.06
TFE3-203ENST00000487451 TRPM7Q96QT4 1865 aa21.67■■□□□ 1.06
TFE3-203ENST00000487451 CHPF2Q9P2E5 772 aa21.67■■□□□ 1.06
TFE3-203ENST00000487451 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
TFE3-203ENST00000487451 GRIPAP1Q4V328 841 aa21.66■■□□□ 1.06
TFE3-203ENST00000487451 NIM1KQ8IY84 436 aa21.66■■□□□ 1.06
TFE3-203ENST00000487451 DDX21Q9NR30 783 aaKnown RBP eCLIP21.66■■□□□ 1.06
TFE3-203ENST00000487451 LMOD1P29536 600 aaPredicted RBP21.65■■□□□ 1.06
TFE3-203ENST00000487451 TCIRG1Q13488 830 aa21.65■■□□□ 1.06
TFE3-203ENST00000487451 THSD7BQ9C0I4 1608 aa21.65■■□□□ 1.06
TFE3-203ENST00000487451 RASSF10A6NK89 507 aa21.64■■□□□ 1.05
TFE3-203ENST00000487451 RUNDC1Q96C34 613 aa21.64■■□□□ 1.05
TFE3-203ENST00000487451 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.05
TFE3-203ENST00000487451 TRMT112Q9UI30 125 aaKnown RBP21.64■■□□□ 1.05
TFE3-203ENST00000487451 HSP90AB3PQ58FF7 597 aa21.63■■□□□ 1.05
TFE3-203ENST00000487451 ADAMTS8Q9UP79 889 aa21.63■■□□□ 1.05
TFE3-203ENST00000487451 TRAF5O00463 557 aa21.62■■□□□ 1.05
TFE3-203ENST00000487451 CXCL9Q07325 125 aa21.62■■□□□ 1.05
TFE3-203ENST00000487451 SH3TC1Q8TE82 1336 aa21.61■■□□□ 1.05
TFE3-203ENST00000487451 HDGFL1Q5TGJ6 251 aa21.61■■□□□ 1.05
TFE3-203ENST00000487451 DPP8Q6V1X1 898 aaPredicted RBP21.61■■□□□ 1.05
TFE3-203ENST00000487451 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
TFE3-203ENST00000487451 GPRC5DQ9NZD1 345 aa21.61■■□□□ 1.05
TFE3-203ENST00000487451 GRAPQ13588 217 aa21.6■■□□□ 1.05
TFE3-203ENST00000487451 WDR43Q15061 677 aaKnown RBP eCLIP21.6■■□□□ 1.05
TFE3-203ENST00000487451 DEFB115Q30KQ5 88 aa21.6■■□□□ 1.05
TFE3-203ENST00000487451 USP50Q70EL3 339 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms