RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	NECTIN2	Q92692	538 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	TSR2	Q969E8	191 aa	Known RBP	13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	FBXO3	Q9UK99	471 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	CACNA1F	O60840	1977 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	HDGFL1	Q5TGJ6	251 aa		13.64	□□□□□ -0.23
TPRKB-208	ENST00000485758	CLEC4G	Q6UXB4	293 aa		13.64	□□□□□ -0.23
TPRKB-208	ENST00000485758	OCEL1	Q9H607	264 aa		13.64	□□□□□ -0.23
TPRKB-208	ENST00000485758	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
TPRKB-208	ENST00000485758	ZNF652	Q9Y2D9	606 aa		13.64	□□□□□ -0.23
TPRKB-208	ENST00000485758	MAP3K15	Q6ZN16	1313 aa		13.64	□□□□□ -0.23
TPRKB-208	ENST00000485758	ARFGEF2	Q9Y6D5	1785 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	PXDNL	A1KZ92	1463 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	CARMIL3	Q8ND23	1372 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	ANXA1	P04083	346 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	PROSER3	Q2NL68	480 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	KIF6	Q6ZMV9	814 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	BICDL1	Q6ZP65	573 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	TTLL7	Q6ZT98	887 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	C8orf58	Q8NAV2	365 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	ZNF521	Q96K83	1311 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	FANCI	Q9NVI1	1328 aa		13.63	□□□□□ -0.23
TPRKB-208	ENST00000485758	ERVV-1	B6SEH8	477 aa		13.62	□□□□□ -0.23
TPRKB-208	ENST00000485758	SERPINB2	P05120	415 aa		13.62	□□□□□ -0.23
TPRKB-208	ENST00000485758	CHPF2	Q9P2E5	772 aa		13.62	□□□□□ -0.23
TPRKB-208	ENST00000485758	ATP10D	Q9P241	1426 aa		13.62	□□□□□ -0.23
TPRKB-208	ENST00000485758	CHD4	Q14839	1912 aa		13.62	□□□□□ -0.23
TPRKB-208	ENST00000485758	COL11A2	P13942	1736 aa	Predicted RBP	13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	ELL2	O00472	640 aa	Predicted RBP	13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	TGFB2	P61812	414 aa		13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	HLF	Q16534	295 aa		13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	SETDB2	Q96T68	719 aa		13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	DBF4	Q9UBU7	674 aa	Predicted RBP	13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	ARFGEF1	Q9Y6D6	1849 aa		13.61	□□□□□ -0.23
TPRKB-208	ENST00000485758	CDAN1	Q8IWY9	1227 aa		13.6	□□□□□ -0.23
TPRKB-208	ENST00000485758	TSPYL6	Q8N831	410 aa		13.6	□□□□□ -0.23
TPRKB-208	ENST00000485758	ZBTB3	Q9H5J0	574 aa		13.6	□□□□□ -0.23
TPRKB-208	ENST00000485758	CACNA1S	Q13698	1873 aa		13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	TWISTNB	Q3B726	338 aa	Predicted RBP	13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	COPS6	Q7L5N1	327 aa		13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	XAGE3	Q8WTP9	111 aa		13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	CHMP4A	Q9BY43	222 aa		13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	MYH16	Q9H6N6	1097 aa		13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	HYPK	Q9NX55	129 aa		13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
TPRKB-208	ENST00000485758	VASP	P50552	380 aa	Predicted RBP	13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	GOLGA2	Q08379	1002 aa		13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	AIMP1	Q12904	312 aa	Known RBP	13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	CCDC30	Q5VVM6	783 aa		13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	PRR5L	Q6MZQ0	368 aa		13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	PDCD7	Q8N8D1	485 aa	Known RBP	13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	GOLGB1	Q14789	3259 aa	Known RBP	13.58	□□□□□ -0.24
TPRKB-208	ENST00000485758	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.57	□□□□□ -0.24
TPRKB-208	ENST00000485758		A0A0G2JLW4	131 aa		13.57	□□□□□ -0.24
TPRKB-208	ENST00000485758	EXOSC9	Q06265	439 aa	Known RBP	13.57	□□□□□ -0.24
TPRKB-208	ENST00000485758	GPR162	Q16538	588 aa		13.57	□□□□□ -0.24
TPRKB-208	ENST00000485758	CNBD1	Q8NA66	436 aa		13.57	□□□□□ -0.24
TPRKB-208	ENST00000485758	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.57	□□□□□ -0.24
TPRKB-208	ENST00000485758	DPEP1	P16444	411 aa		13.56	□□□□□ -0.24
TPRKB-208	ENST00000485758	YBX3	P16989	372 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	5e-6	■■■■□ 19.9
TPRKB-208	ENST00000485758	ST5	P78524	1137 aa		13.56	□□□□□ -0.24
TPRKB-208	ENST00000485758	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.56	□□□□□ -0.24
TPRKB-208	ENST00000485758	UBN2	Q6ZU65	1347 aa		13.56	□□□□□ -0.24
TPRKB-208	ENST00000485758	UTRN	P46939	3433 aa		13.56	□□□□□ -0.24
TPRKB-208	ENST00000485758		E9PSI1	815 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	NPHP1	O15259	732 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	CHRM1	P11229	460 aa	Predicted RBP	13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	KCNA3	P22001	575 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	GPT	P24298	496 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	HSP90AB3P	Q58FF7	597 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	ZNF34	Q8IZ26	560 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	PLBD2	Q8NHP8	589 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	BRIP1	Q9BX63	1249 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	PHAX	Q9H814	394 aa	Known RBP	13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	LAMB2	P55268	1798 aa		13.55	□□□□□ -0.24
TPRKB-208	ENST00000485758	VAMP4	O75379	141 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	CHRNA5	P30532	468 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	PARP10	Q53GL7	1025 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	TPTE2	Q6XPS3	522 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	ANKRD13D	Q6ZTN6	518 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	CCDC24	Q8N4L8	307 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	STK31	Q9BXU1	1019 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	NYX	Q9GZU5	481 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	WWC3	Q9ULE0	1092 aa		13.54	□□□□□ -0.24
TPRKB-208	ENST00000485758	FAM177B	A6PVY3	158 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	TCERG1	O14776	1098 aa	Known RBP	13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	GRIN3B	O60391	1043 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	PDE6B	P35913	854 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	SLFN5	Q08AF3	891 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	SUSD4	Q5VX71	490 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	C2CD5	Q86YS7	1000 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	PIM2	Q9P1W9	311 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	PDZRN3	Q9UPQ7	1066 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	ABCC12	Q96J65	1359 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	RIC1	Q4ADV7	1423 aa		13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758	DDX60	Q8IY21	1712 aa	Known RBP	13.53	□□□□□ -0.24
TPRKB-208	ENST00000485758		H0YIN7	160 aa		13.52	□□□□□ -0.25
TPRKB-208	ENST00000485758	NTSR2	O95665	410 aa		13.52	□□□□□ -0.25
TPRKB-208	ENST00000485758	TCIRG1	Q13488	830 aa		13.52	□□□□□ -0.25
TPRKB-208	ENST00000485758	PPP1R42	Q7Z4L9	355 aa		13.52	□□□□□ -0.25

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