RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 LRRC37AA6NMS7 1700 aa17.42■□□□□ 0.38
UBA3-210ENST00000485424 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
UBA3-210ENST00000485424 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
UBA3-210ENST00000485424 TAF1DQ9H5J8 278 aaPredicted RBP17.42■□□□□ 0.38
UBA3-210ENST00000485424 RRP7AQ9Y3A4 280 aaKnown RBP17.42■□□□□ 0.38
UBA3-210ENST00000485424 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
UBA3-210ENST00000485424 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
UBA3-210ENST00000485424 POLR2AP24928 1970 aaKnown RBP17.41■□□□□ 0.38
UBA3-210ENST00000485424 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
UBA3-210ENST00000485424 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
UBA3-210ENST00000485424 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
UBA3-210ENST00000485424 NUTM1Q86Y26 1132 aa17.41■□□□□ 0.38
UBA3-210ENST00000485424 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
UBA3-210ENST00000485424 TNS4Q8IZW8 715 aa17.41■□□□□ 0.38
UBA3-210ENST00000485424 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
UBA3-210ENST00000485424 ERVV-1B6SEH8 477 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 MYL6BP14649 208 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 RIPK4P57078 832 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
UBA3-210ENST00000485424 TTLL7Q6ZT98 887 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 MKRN1Q9UHC7 482 aaKnown RBP17.4■□□□□ 0.38
UBA3-210ENST00000485424 UBN2Q6ZU65 1347 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
UBA3-210ENST00000485424 IARSP41252 1262 aaKnown RBP17.39■□□□□ 0.37
UBA3-210ENST00000485424 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
UBA3-210ENST00000485424 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBA3-210ENST00000485424 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
UBA3-210ENST00000485424 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
UBA3-210ENST00000485424 RNF123Q5XPI4 1314 aa17.38■□□□□ 0.37
UBA3-210ENST00000485424 FZD9O00144 591 aa17.37■□□□□ 0.37
UBA3-210ENST00000485424 GPTP24298 496 aa17.37■□□□□ 0.37
UBA3-210ENST00000485424 EAPPQ56P03 285 aaPredicted RBP17.37■□□□□ 0.37
UBA3-210ENST00000485424 PSMD1Q99460 953 aa17.37■□□□□ 0.37
UBA3-210ENST00000485424 ZBTB3Q9H5J0 574 aa17.37■□□□□ 0.37
UBA3-210ENST00000485424 ITGBL1O95965 494 aaPredicted RBP17.36■□□□□ 0.37
UBA3-210ENST00000485424 EPHX2P34913 555 aa17.36■□□□□ 0.37
UBA3-210ENST00000485424 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
UBA3-210ENST00000485424 NTSR2O95665 410 aa17.35■□□□□ 0.37
UBA3-210ENST00000485424 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
UBA3-210ENST00000485424 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
UBA3-210ENST00000485424 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
UBA3-210ENST00000485424 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
UBA3-210ENST00000485424 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
UBA3-210ENST00000485424 GPC2Q8N158 579 aa17.35■□□□□ 0.37
UBA3-210ENST00000485424 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
UBA3-210ENST00000485424 PSME4Q14997 1843 aa17.34■□□□□ 0.37
UBA3-210ENST00000485424 SUSD4Q5VX71 490 aa17.34■□□□□ 0.37
UBA3-210ENST00000485424 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
UBA3-210ENST00000485424 ZNF34Q8IZ26 560 aa17.34■□□□□ 0.37
UBA3-210ENST00000485424 MYH3P11055 1940 aa17.33■□□□□ 0.37
UBA3-210ENST00000485424 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
UBA3-210ENST00000485424 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
UBA3-210ENST00000485424 GIGYF2Q6Y7W6 1299 aaKnown RBP17.33■□□□□ 0.36
UBA3-210ENST00000485424 PPP1R42Q7Z4L9 355 aa17.33■□□□□ 0.36
UBA3-210ENST00000485424 JDP2Q8WYK2 163 aa17.33■□□□□ 0.36
UBA3-210ENST00000485424 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
UBA3-210ENST00000485424 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
UBA3-210ENST00000485424 SPEF2Q9C093 1822 aa17.33■□□□□ 0.36
UBA3-210ENST00000485424 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
UBA3-210ENST00000485424 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
UBA3-210ENST00000485424 C3orf67Q6ZVT6 689 aa17.32■□□□□ 0.36
UBA3-210ENST00000485424 LRP10Q7Z4F1 713 aa17.32■□□□□ 0.36
UBA3-210ENST00000485424 PNMA8AQ86V59 439 aaPredicted RBP17.32■□□□□ 0.36
UBA3-210ENST00000485424 CLEC11AQ9Y240 323 aa17.32■□□□□ 0.36
UBA3-210ENST00000485424 PPEF1O14829 653 aaPredicted RBP17.31■□□□□ 0.36
UBA3-210ENST00000485424 VEGFBP49765 207 aa17.31■□□□□ 0.36
UBA3-210ENST00000485424 MAP1SQ66K74 1059 aaPredicted RBP17.31■□□□□ 0.36
UBA3-210ENST00000485424 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
UBA3-210ENST00000485424 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
UBA3-210ENST00000485424 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
UBA3-210ENST00000485424 FOXN1O15353 648 aa17.3■□□□□ 0.36
UBA3-210ENST00000485424 EIF6P56537 245 aaKnown RBP17.3■□□□□ 0.36
UBA3-210ENST00000485424 PDIA6Q15084 440 aa17.3■□□□□ 0.36
UBA3-210ENST00000485424 PROSER3Q2NL68 480 aa17.3■□□□□ 0.36
UBA3-210ENST00000485424 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
UBA3-210ENST00000485424 GJA3Q9Y6H8 435 aa17.3■□□□□ 0.36
UBA3-210ENST00000485424 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 CASP8AP2Q9UKL3 1982 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 COL4A1P02462 1669 aa17.29■□□□□ 0.36
UBA3-210ENST00000485424 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
UBA3-210ENST00000485424 ANXA1P04083 346 aa17.28■□□□□ 0.36
UBA3-210ENST00000485424 SCNN1DP51172 638 aa17.28■□□□□ 0.36
UBA3-210ENST00000485424 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
UBA3-210ENST00000485424 ABCC4O15439 1325 aa17.27■□□□□ 0.36
UBA3-210ENST00000485424 RASSF10A6NK89 507 aa17.27■□□□□ 0.36
UBA3-210ENST00000485424 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
UBA3-210ENST00000485424 HSP90AB3PQ58FF7 597 aa17.27■□□□□ 0.36
UBA3-210ENST00000485424 NLRP3Q96P20 1036 aa17.27■□□□□ 0.36
UBA3-210ENST00000485424 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.35
UBA3-210ENST00000485424 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
UBA3-210ENST00000485424 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
UBA3-210ENST00000485424 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
UBA3-210ENST00000485424 EPS15P42566 896 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms