RNA–Protein interactions for RNA: ENST00000484840.5

GTF2I-209, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-209ENST00000484840 RAPGEF2Q9Y4G8 1499 aa8.64□□□□□ -1.03
GTF2I-209ENST00000484840 BTBD11A6QL63 1104 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 IGFBP4P22692 258 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 TXLNAP40222 546 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 SWI5Q1ZZU3 235 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 NBPF1Q3BBV0 1214 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 SH3PXD2AQ5TCZ1 1133 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 SCG3Q8WXD2 468 aaKnown RBP8.63□□□□□ -1.03
GTF2I-209ENST00000484840 AIDAQ96BJ3 306 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 C2orf49Q9BVC5 232 aaPredicted RBP8.63□□□□□ -1.03
GTF2I-209ENST00000484840 NUCKS1Q9H1E3 243 aaKnown RBP8.63□□□□□ -1.03
GTF2I-209ENST00000484840 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 GOLGA3Q08378 1498 aa8.63□□□□□ -1.03
GTF2I-209ENST00000484840 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
GTF2I-209ENST00000484840 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
GTF2I-209ENST00000484840 FOXR1Q6PIV2 292 aa8.62□□□□□ -1.03
GTF2I-209ENST00000484840 CUL7Q14999 1698 aa8.62□□□□□ -1.03
GTF2I-209ENST00000484840 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 ERICH3Q5RHP9 1530 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 LGR5O75473 907 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 TATP17735 454 aaPredicted RBP8.61□□□□□ -1.03
GTF2I-209ENST00000484840 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 PGBD3Q8N328 593 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 ZIC5Q96T25 663 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 MKL2Q9ULH7 1088 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 ZNF232Q9UNY5 417 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 KIF21BO75037 1637 aa8.61□□□□□ -1.03
GTF2I-209ENST00000484840 TTBK1Q5TCY1 1321 aaPredicted RBP8.6□□□□□ -1.03
GTF2I-209ENST00000484840 NLRP8Q86W28 1048 aa8.6□□□□□ -1.03
GTF2I-209ENST00000484840 KRTAP19-1Q8IUB9 90 aa8.6□□□□□ -1.03
GTF2I-209ENST00000484840 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
GTF2I-209ENST00000484840 GPC6Q9Y625 555 aaPredicted RBP8.6□□□□□ -1.03
GTF2I-209ENST00000484840 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 C1QTNF9BB2RNN3 333 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 EFHC2Q5JST6 749 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 ZMYM1Q5SVZ6 1142 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 SEMA6BQ9H3T3 888 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 FHAD1B1AJZ9 1412 aa8.59□□□□□ -1.03
GTF2I-209ENST00000484840 PRXQ9BXM0 1461 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 CHD1O14646 1710 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 FOXO3O43524 673 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 OCLNQ16625 522 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
GTF2I-209ENST00000484840 CFHR5Q9BXR6 569 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 NDFIP2Q9NV92 336 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 HCN4Q9Y3Q4 1203 aa8.58□□□□□ -1.04
GTF2I-209ENST00000484840 MAGI1Q96QZ7 1491 aaPredicted RBP8.57□□□□□ -1.04
GTF2I-209ENST00000484840 MX2P20592 715 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 ARSJQ5FYB0 599 aaPredicted RBP8.57□□□□□ -1.04
GTF2I-209ENST00000484840 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 KLRG1Q96E93 195 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 PHACTR1Q9C0D0 580 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 SUV39H2Q9H5I1 410 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 SLAIN2Q9P270 581 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 SYNJ2O15056 1496 aa8.57□□□□□ -1.04
GTF2I-209ENST00000484840 FIGNL1Q6PIW4 674 aa8.56□□□□□ -1.04
GTF2I-209ENST00000484840 C1orf229Q6ZS94 237 aaPredicted RBP8.56□□□□□ -1.04
GTF2I-209ENST00000484840 ALDH16A1Q8IZ83 802 aa8.56□□□□□ -1.04
GTF2I-209ENST00000484840 ARID3AQ99856 593 aa8.56□□□□□ -1.04
GTF2I-209ENST00000484840 OXCT2Q9BYC2 517 aaPredicted RBP8.56□□□□□ -1.04
GTF2I-209ENST00000484840 ZCCHC2Q9C0B9 1178 aaKnown RBP8.56□□□□□ -1.04
GTF2I-209ENST00000484840 GRIN2AQ12879 1464 aa8.56□□□□□ -1.04
GTF2I-209ENST00000484840 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 BNIP3LO60238 219 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 LINC00114Q6XXX2 140 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 PRIMPOLQ96LW4 560 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 PCDHGC4Q9Y5F7 938 aa8.55□□□□□ -1.04
GTF2I-209ENST00000484840 PRMT3O60678 531 aa8.54□□□□□ -1.04
GTF2I-209ENST00000484840 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
GTF2I-209ENST00000484840 GRIN2CQ14957 1233 aa8.54□□□□□ -1.04
GTF2I-209ENST00000484840 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
GTF2I-209ENST00000484840 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
GTF2I-209ENST00000484840 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
GTF2I-209ENST00000484840 ATXN7L1Q9ULK2 861 aaPredicted RBP8.54□□□□□ -1.04
GTF2I-209ENST00000484840 NSFL1CQ9UNZ2 370 aaKnown RBP8.54□□□□□ -1.04
GTF2I-209ENST00000484840 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
GTF2I-209ENST00000484840 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
GTF2I-209ENST00000484840 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
GTF2I-209ENST00000484840 HCN2Q9UL51 889 aa8.53□□□□□ -1.04
GTF2I-209ENST00000484840 PHF24Q9UPV7 400 aa8.53□□□□□ -1.04
GTF2I-209ENST00000484840 CEP162Q5TB80 1403 aa8.53□□□□□ -1.04
GTF2I-209ENST00000484840 CTTNBP2Q8WZ74 1663 aa8.53□□□□□ -1.04
GTF2I-209ENST00000484840 TNIKQ9UKE5 1360 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
GTF2I-209ENST00000484840 FAM157BP0CG42 384 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 CHRNA4P43681 627 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 DOC2BQ14184 412 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 RTN1Q16799 776 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 COL26A1Q96A83 441 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 QTRT2Q9H974 415 aaKnown RBP8.52□□□□□ -1.05
GTF2I-209ENST00000484840 CEP170Q5SW79 1584 aa8.52□□□□□ -1.05
GTF2I-209ENST00000484840 TNP2Q05952 138 aa8.51□□□□□ -1.05
GTF2I-209ENST00000484840 LRRC69Q6ZNQ3 347 aa8.51□□□□□ -1.05
GTF2I-209ENST00000484840 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
GTF2I-209ENST00000484840 MYO19Q96H55 970 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms