RNA–Protein interactions for RNA: ENST00000482542.5

SFXN5-215, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-215ENST00000482542 ABCC12Q96J65 1359 aa18.41■□□□□ 0.54
SFXN5-215ENST00000482542 NTSR2O95665 410 aa18.4■□□□□ 0.54
SFXN5-215ENST00000482542 EIF6P56537 245 aaKnown RBP18.4■□□□□ 0.54
SFXN5-215ENST00000482542 ZNF541Q9H0D2 1346 aa18.4■□□□□ 0.54
SFXN5-215ENST00000482542 ARFGEF2Q9Y6D5 1785 aa18.4■□□□□ 0.54
SFXN5-215ENST00000482542 CCDC88AQ3V6T2 1871 aa18.39■□□□□ 0.54
SFXN5-215ENST00000482542 DICER1Q9UPY3 1922 aaKnown RBP18.39■□□□□ 0.53
SFXN5-215ENST00000482542 EPHX2P34913 555 aa18.39■□□□□ 0.53
SFXN5-215ENST00000482542 PDIA6Q15084 440 aa18.39■□□□□ 0.53
SFXN5-215ENST00000482542 EAPPQ56P03 285 aaPredicted RBP18.39■□□□□ 0.53
SFXN5-215ENST00000482542 HSP90AB3PQ58FF7 597 aa18.39■□□□□ 0.53
SFXN5-215ENST00000482542 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
SFXN5-215ENST00000482542 COL13A1Q5TAT6 717 aaPredicted RBP18.39■□□□□ 0.53
SFXN5-215ENST00000482542 UTP14AQ9BVJ6 771 aaKnown RBP18.39■□□□□ 0.53
SFXN5-215ENST00000482542 CLEC11AQ9Y240 323 aa18.39■□□□□ 0.53
SFXN5-215ENST00000482542 RNF123Q5XPI4 1314 aa18.39■□□□□ 0.53
SFXN5-215ENST00000482542 LAMB4A4D0S4 1761 aa18.38■□□□□ 0.53
SFXN5-215ENST00000482542 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-215ENST00000482542 HSPA1AP0DMV8 641 aaKnown RBP18.38■□□□□ 0.53
SFXN5-215ENST00000482542 HSPA1BP0DMV9 641 aaKnown RBP18.38■□□□□ 0.53
SFXN5-215ENST00000482542 LRP10Q7Z4F1 713 aa18.38■□□□□ 0.53
SFXN5-215ENST00000482542 VPS33BQ9H267 617 aa18.38■□□□□ 0.53
SFXN5-215ENST00000482542 PASKQ96RG2 1323 aa18.38■□□□□ 0.53
SFXN5-215ENST00000482542 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
SFXN5-215ENST00000482542 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
SFXN5-215ENST00000482542 TMEM88BA6NKF7 163 aa18.36■□□□□ 0.53
SFXN5-215ENST00000482542 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
SFXN5-215ENST00000482542 MKRN1Q9UHC7 482 aaKnown RBP18.36■□□□□ 0.53
SFXN5-215ENST00000482542 SNED1Q8TER0 1413 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 CHL1O00533 1208 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 BBOX1O75936 387 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 ITGBL1O95965 494 aaPredicted RBP18.35■□□□□ 0.53
SFXN5-215ENST00000482542 LMOD1P29536 600 aaPredicted RBP18.35■□□□□ 0.53
SFXN5-215ENST00000482542 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
SFXN5-215ENST00000482542 COPS6Q7L5N1 327 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 TNS4Q8IZW8 715 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 ATP6V0A2Q9Y487 856 aa18.35■□□□□ 0.53
SFXN5-215ENST00000482542 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
SFXN5-215ENST00000482542 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
SFXN5-215ENST00000482542 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
SFXN5-215ENST00000482542 SUPT20HQ8NEM7 779 aa18.34■□□□□ 0.53
SFXN5-215ENST00000482542 DDX21Q9NR30 783 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFXN5-215ENST00000482542 GJA3Q9Y6H8 435 aa18.34■□□□□ 0.53
SFXN5-215ENST00000482542 AIMP1Q12904 312 aaKnown RBP18.33■□□□□ 0.52
SFXN5-215ENST00000482542 TCIRG1Q13488 830 aa18.33■□□□□ 0.52
SFXN5-215ENST00000482542 PROSER3Q2NL68 480 aa18.33■□□□□ 0.52
SFXN5-215ENST00000482542 NIM1KQ8IY84 436 aa18.33■□□□□ 0.52
SFXN5-215ENST00000482542 XAGE3Q8WTP9 111 aa18.33■□□□□ 0.52
SFXN5-215ENST00000482542 SCN4AP35499 1836 aa18.33■□□□□ 0.52
SFXN5-215ENST00000482542 CNTNAP1P78357 1384 aa18.32■□□□□ 0.52
SFXN5-215ENST00000482542 DLG5Q8TDM6 1919 aa18.32■□□□□ 0.52
SFXN5-215ENST00000482542 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
SFXN5-215ENST00000482542 HOXB7P09629 217 aa18.32■□□□□ 0.52
SFXN5-215ENST00000482542 C3orf67Q6ZVT6 689 aa18.32■□□□□ 0.52
SFXN5-215ENST00000482542 NLRP10Q86W26 655 aa18.32■□□□□ 0.52
SFXN5-215ENST00000482542 PPIP5K2O43314 1243 aa18.31■□□□□ 0.52
SFXN5-215ENST00000482542 ANXA1P04083 346 aa18.31■□□□□ 0.52
SFXN5-215ENST00000482542 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
SFXN5-215ENST00000482542 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
SFXN5-215ENST00000482542 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
SFXN5-215ENST00000482542 NECTIN2Q92692 538 aa18.31■□□□□ 0.52
SFXN5-215ENST00000482542 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
SFXN5-215ENST00000482542 LAS1LQ9Y4W2 734 aaKnown RBP18.31■□□□□ 0.52
SFXN5-215ENST00000482542 SH3TC1Q8TE82 1336 aa18.3■□□□□ 0.52
SFXN5-215ENST00000482542 MAP1SQ66K74 1059 aaPredicted RBP18.3■□□□□ 0.52
SFXN5-215ENST00000482542 USP50Q70EL3 339 aaPredicted RBP18.3■□□□□ 0.52
SFXN5-215ENST00000482542 RTFDC1Q9BY42 306 aaPredicted RBP18.3■□□□□ 0.52
SFXN5-215ENST00000482542 CACNA1SQ13698 1873 aa18.3■□□□□ 0.52
SFXN5-215ENST00000482542 ABCC4O15439 1325 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 PCNTO95613 3336 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 NUP98P52948 1817 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 HDGFL1Q5TGJ6 251 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 DPP8Q6V1X1 898 aaPredicted RBP18.29■□□□□ 0.52
SFXN5-215ENST00000482542 TMC4Q7Z404 712 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
SFXN5-215ENST00000482542 ZNRF3Q9ULT6 936 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
SFXN5-215ENST00000482542 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
SFXN5-215ENST00000482542 VEGFBP49765 207 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 SCNN1DP51172 638 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 MPNDQ8N594 471 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 AIDAQ96BJ3 306 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 ADAMTS8Q9UP79 889 aa18.28■□□□□ 0.52
SFXN5-215ENST00000482542 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 EPS15P42566 896 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 GRAPQ13588 217 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 AOC3Q16853 763 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 DEFB115Q30KQ5 88 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.52
SFXN5-215ENST00000482542 HYPKQ9NX55 129 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
SFXN5-215ENST00000482542 ADARB2Q9NS39 739 aaKnown RBP18.26■□□□□ 0.51
SFXN5-215ENST00000482542 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
SFXN5-215ENST00000482542 TNIP1Q15025 636 aa18.25■□□□□ 0.51
SFXN5-215ENST00000482542 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
SFXN5-215ENST00000482542 ABT1Q9ULW3 272 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms