RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 ZNF34Q8IZ26 560 aa22.04■■□□□ 1.12
NUP58-212ENST00000481980 TNS4Q8IZW8 715 aa22.04■■□□□ 1.12
NUP58-212ENST00000481980 RPGRQ92834 1020 aaKnown RBP22.04■■□□□ 1.12
NUP58-212ENST00000481980 MKRN1Q9UHC7 482 aaKnown RBP22.04■■□□□ 1.12
NUP58-212ENST00000481980 RIC1Q4ADV7 1423 aa22.04■■□□□ 1.12
NUP58-212ENST00000481980 EAPPQ56P03 285 aaPredicted RBP22.03■■□□□ 1.12
NUP58-212ENST00000481980 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
NUP58-212ENST00000481980 TSPYL4Q9UJ04 414 aa22.03■■□□□ 1.12
NUP58-212ENST00000481980 ITGBL1O95965 494 aaPredicted RBP22.02■■□□□ 1.12
NUP58-212ENST00000481980 EPHX2P34913 555 aa22.02■■□□□ 1.12
NUP58-212ENST00000481980 GPC2Q8N158 579 aa22.02■■□□□ 1.12
NUP58-212ENST00000481980 JDP2Q8WYK2 163 aa22.02■■□□□ 1.12
NUP58-212ENST00000481980 NTSR2O95665 410 aa22.01■■□□□ 1.11
NUP58-212ENST00000481980 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
NUP58-212ENST00000481980 PNMA8AQ86V59 439 aaPredicted RBP22.01■■□□□ 1.11
NUP58-212ENST00000481980 RBM17Q96I25 401 aaKnown RBP22.01■■□□□ 1.11
NUP58-212ENST00000481980 CRAMP1Q96RY5 1269 aa22.01■■□□□ 1.11
NUP58-212ENST00000481980 CLEC11AQ9Y240 323 aa22.01■■□□□ 1.11
NUP58-212ENST00000481980 RIPK4P57078 832 aa22■■□□□ 1.11
NUP58-212ENST00000481980 PDIA6Q15084 440 aa22■■□□□ 1.11
NUP58-212ENST00000481980 PARP10Q53GL7 1025 aa22■■□□□ 1.11
NUP58-212ENST00000481980 LRP10Q7Z4F1 713 aa22■■□□□ 1.11
NUP58-212ENST00000481980 PPP1R42Q7Z4L9 355 aa22■■□□□ 1.11
NUP58-212ENST00000481980 RNF123Q5XPI4 1314 aa22■■□□□ 1.11
NUP58-212ENST00000481980 CNTNAP1P78357 1384 aa21.99■■□□□ 1.11
NUP58-212ENST00000481980 TMEM88BA6NKF7 163 aa21.99■■□□□ 1.11
NUP58-212ENST00000481980 ANP32CO43423 234 aa21.99■■□□□ 1.11
NUP58-212ENST00000481980 BABAM1Q9NWV8 329 aa21.99■■□□□ 1.11
NUP58-212ENST00000481980 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
NUP58-212ENST00000481980 C3orf67Q6ZVT6 689 aa21.98■■□□□ 1.11
NUP58-212ENST00000481980 PPEF1O14829 653 aaPredicted RBP21.97■■□□□ 1.11
NUP58-212ENST00000481980 EIF6P56537 245 aaKnown RBP21.97■■□□□ 1.11
NUP58-212ENST00000481980 RALBP1Q15311 655 aa21.97■■□□□ 1.11
NUP58-212ENST00000481980 NLRP3Q96P20 1036 aa21.97■■□□□ 1.11
NUP58-212ENST00000481980 COL4A5P29400 1685 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 TCERG1O14776 1098 aaKnown RBP21.96■■□□□ 1.11
NUP58-212ENST00000481980 CAPN15O75808 1086 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 SLC10A5Q5PT55 438 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 CNTROBQ8N137 903 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 LARGE2Q8N3Y3 721 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 UTP14AQ9BVJ6 771 aaKnown RBP21.96■■□□□ 1.11
NUP58-212ENST00000481980 GJA3Q9Y6H8 435 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 ADAMTSL1Q8N6G6 1762 aa21.96■■□□□ 1.11
NUP58-212ENST00000481980 TMPOP42166 694 aaKnown RBP21.95■■□□□ 1.1
NUP58-212ENST00000481980 LMOD3Q0VAK6 560 aa21.95■■□□□ 1.1
NUP58-212ENST00000481980 PROSER3Q2NL68 480 aa21.95■■□□□ 1.1
NUP58-212ENST00000481980 MAP1SQ66K74 1059 aaPredicted RBP21.95■■□□□ 1.1
NUP58-212ENST00000481980 SLC51AQ86UW1 340 aa21.95■■□□□ 1.1
NUP58-212ENST00000481980 ANXA1P04083 346 aa21.94■■□□□ 1.1
NUP58-212ENST00000481980 VEGFBP49765 207 aa21.94■■□□□ 1.1
NUP58-212ENST00000481980 TMX4Q9H1E5 349 aaPredicted RBP21.93■■□□□ 1.1
NUP58-212ENST00000481980 LMOD1P29536 600 aaPredicted RBP21.92■■□□□ 1.1
NUP58-212ENST00000481980 ATP6V0A2Q9Y487 856 aa21.92■■□□□ 1.1
NUP58-212ENST00000481980 FOXN1O15353 648 aa21.91■■□□□ 1.1
NUP58-212ENST00000481980 SCNN1DP51172 638 aa21.91■■□□□ 1.1
NUP58-212ENST00000481980 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
NUP58-212ENST00000481980 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
NUP58-212ENST00000481980 NIM1KQ8IY84 436 aa21.91■■□□□ 1.1
NUP58-212ENST00000481980 VPS33BQ9H267 617 aa21.91■■□□□ 1.1
NUP58-212ENST00000481980 EPS15P42566 896 aa21.9■■□□□ 1.1
NUP58-212ENST00000481980 NLRP10Q86W26 655 aa21.9■■□□□ 1.1
NUP58-212ENST00000481980 XAGE3Q8WTP9 111 aa21.9■■□□□ 1.1
NUP58-212ENST00000481980 NECTIN2Q92692 538 aa21.9■■□□□ 1.1
NUP58-212ENST00000481980 ABCC4O15439 1325 aa21.89■■□□□ 1.1
NUP58-212ENST00000481980 RASSF10A6NK89 507 aa21.89■■□□□ 1.09
NUP58-212ENST00000481980 PPIP5K2O43314 1243 aa21.89■■□□□ 1.09
NUP58-212ENST00000481980 BBOX1O75936 387 aa21.89■■□□□ 1.09
NUP58-212ENST00000481980 AIMP1Q12904 312 aaKnown RBP21.89■■□□□ 1.09
NUP58-212ENST00000481980 CHL1O00533 1208 aa21.88■■□□□ 1.09
NUP58-212ENST00000481980 TCIRG1Q13488 830 aa21.88■■□□□ 1.09
NUP58-212ENST00000481980 AOC3Q16853 763 aa21.88■■□□□ 1.09
NUP58-212ENST00000481980 DEFB115Q30KQ5 88 aa21.88■■□□□ 1.09
NUP58-212ENST00000481980 AIDAQ96BJ3 306 aa21.88■■□□□ 1.09
NUP58-212ENST00000481980 RTFDC1Q9BY42 306 aaPredicted RBP21.88■■□□□ 1.09
NUP58-212ENST00000481980 DDX21Q9NR30 783 aaKnown RBP eCLIP21.88■■□□□ 1.09
NUP58-212ENST00000481980 LTBP1Q14766 1721 aa21.88■■□□□ 1.09
NUP58-212ENST00000481980 HCLS1P14317 486 aaPredicted RBP21.87■■□□□ 1.09
NUP58-212ENST00000481980 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
NUP58-212ENST00000481980 USP50Q70EL3 339 aaPredicted RBP21.87■■□□□ 1.09
NUP58-212ENST00000481980 CCDC146Q8IYE0 955 aa21.87■■□□□ 1.09
NUP58-212ENST00000481980 SUPT20HQ8NEM7 779 aa21.87■■□□□ 1.09
NUP58-212ENST00000481980 MYBBP1AQ9BQG0 1328 aaKnown RBP21.86■■□□□ 1.09
NUP58-212ENST00000481980 CTCFP49711 727 aaPredicted RBP21.86■■□□□ 1.09
NUP58-212ENST00000481980 KRT24Q2M2I5 525 aa21.86■■□□□ 1.09
NUP58-212ENST00000481980 SP8Q8IXZ3 490 aa21.86■■□□□ 1.09
NUP58-212ENST00000481980 PRDM10Q9NQV6 1147 aa21.86■■□□□ 1.09
NUP58-212ENST00000481980 WBP1LQ9NX94 342 aa21.86■■□□□ 1.09
NUP58-212ENST00000481980 TRMT112Q9UI30 125 aaKnown RBP21.86■■□□□ 1.09
NUP58-212ENST00000481980 ZNRF3Q9ULT6 936 aa21.86■■□□□ 1.09
NUP58-212ENST00000481980 DPP8Q6V1X1 898 aaPredicted RBP21.85■■□□□ 1.09
NUP58-212ENST00000481980 ABT1Q9ULW3 272 aaKnown RBP21.85■■□□□ 1.09
NUP58-212ENST00000481980 TRIM35Q9UPQ4 493 aa21.85■■□□□ 1.09
NUP58-212ENST00000481980 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
NUP58-212ENST00000481980 CXCL9Q07325 125 aa21.84■■□□□ 1.09
NUP58-212ENST00000481980 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
NUP58-212ENST00000481980 MPNDQ8N594 471 aa21.84■■□□□ 1.09
NUP58-212ENST00000481980 RUNDC1Q96C34 613 aa21.84■■□□□ 1.09
NUP58-212ENST00000481980 GPRC5DQ9NZD1 345 aa21.84■■□□□ 1.09
NUP58-212ENST00000481980 LAS1LQ9Y4W2 734 aaKnown RBP21.84■■□□□ 1.09
NUP58-212ENST00000481980 ADARB2Q9NS39 739 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms