RNA–Protein interactions for RNA: ENST00000481439.1

SETDB2-204, Transcript of SET domain bifurcated 2, humanhuman

TSL 1 (best)

Gene SETDB2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB2-204ENST00000481439 L3MBTL3Q96JM7 780 aaPredicted RBP17.2■□□□□ 0.34
SETDB2-204ENST00000481439 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
SETDB2-204ENST00000481439 ZNF541Q9H0D2 1346 aa17.2■□□□□ 0.34
SETDB2-204ENST00000481439 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
SETDB2-204ENST00000481439 PARP10Q53GL7 1025 aa17.19■□□□□ 0.34
SETDB2-204ENST00000481439 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
SETDB2-204ENST00000481439 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
SETDB2-204ENST00000481439 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
SETDB2-204ENST00000481439 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
SETDB2-204ENST00000481439 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
SETDB2-204ENST00000481439 SYNE4Q8N205 404 aa17.18■□□□□ 0.34
SETDB2-204ENST00000481439 PSMD1Q99460 953 aa17.18■□□□□ 0.34
SETDB2-204ENST00000481439 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
SETDB2-204ENST00000481439 NUP98P52948 1817 aa17.18■□□□□ 0.34
SETDB2-204ENST00000481439 IQCA1LA6NCM1 817 aa17.17■□□□□ 0.34
SETDB2-204ENST00000481439 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
SETDB2-204ENST00000481439 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
SETDB2-204ENST00000481439 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
SETDB2-204ENST00000481439 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
SETDB2-204ENST00000481439 CRAMP1Q96RY5 1269 aa17.17■□□□□ 0.34
SETDB2-204ENST00000481439 FZD9O00144 591 aa17.16■□□□□ 0.34
SETDB2-204ENST00000481439 RBM17Q96I25 401 aaKnown RBP17.16■□□□□ 0.34
SETDB2-204ENST00000481439 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
SETDB2-204ENST00000481439 TAF1DQ9H5J8 278 aaPredicted RBP17.16■□□□□ 0.34
SETDB2-204ENST00000481439 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
SETDB2-204ENST00000481439 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
SETDB2-204ENST00000481439 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
SETDB2-204ENST00000481439 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
SETDB2-204ENST00000481439 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
SETDB2-204ENST00000481439 CHPF2Q9P2E5 772 aa17.15■□□□□ 0.34
SETDB2-204ENST00000481439 COL4A5P29400 1685 aa17.15■□□□□ 0.34
SETDB2-204ENST00000481439 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
SETDB2-204ENST00000481439 NLRP3Q96P20 1036 aa17.14■□□□□ 0.33
SETDB2-204ENST00000481439 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
SETDB2-204ENST00000481439 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
SETDB2-204ENST00000481439 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
SETDB2-204ENST00000481439 LDHDQ86WU2 507 aa17.13■□□□□ 0.33
SETDB2-204ENST00000481439 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
SETDB2-204ENST00000481439 HOXB7P09629 217 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 GPC2Q8N158 579 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 JDP2Q8WYK2 163 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 CFAP44Q96MT7 982 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 ABCC4O15439 1325 aa17.12■□□□□ 0.33
SETDB2-204ENST00000481439 HCLS1P14317 486 aaPredicted RBP17.11■□□□□ 0.33
SETDB2-204ENST00000481439 EPHX2P34913 555 aa17.11■□□□□ 0.33
SETDB2-204ENST00000481439 EAPPQ56P03 285 aaPredicted RBP17.11■□□□□ 0.33
SETDB2-204ENST00000481439 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
SETDB2-204ENST00000481439 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
SETDB2-204ENST00000481439 PASKQ96RG2 1323 aa17.11■□□□□ 0.33
SETDB2-204ENST00000481439 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
SETDB2-204ENST00000481439 CREBZFQ9NS37 354 aa17.1■□□□□ 0.33
SETDB2-204ENST00000481439 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
SETDB2-204ENST00000481439 APAF1O14727 1248 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 DUSP27Q5VZP5 1158 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
SETDB2-204ENST00000481439 SH3TC1Q8TE82 1336 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 PCNTO95613 3336 aa17.09■□□□□ 0.33
SETDB2-204ENST00000481439 SCN4AP35499 1836 aa17.08■□□□□ 0.33
SETDB2-204ENST00000481439 ITGBL1O95965 494 aaPredicted RBP17.08■□□□□ 0.32
SETDB2-204ENST00000481439 EIF6P56537 245 aaKnown RBP17.08■□□□□ 0.32
SETDB2-204ENST00000481439 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 SCNN1DP51172 638 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 AOC3Q16853 763 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
SETDB2-204ENST00000481439 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 RTFDC1Q9BY42 306 aaPredicted RBP17.07■□□□□ 0.32
SETDB2-204ENST00000481439 GJA3Q9Y6H8 435 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
SETDB2-204ENST00000481439 BBOX1O75936 387 aa17.06■□□□□ 0.32
SETDB2-204ENST00000481439 COL13A1Q5TAT6 717 aaPredicted RBP17.06■□□□□ 0.32
SETDB2-204ENST00000481439 NIM1KQ8IY84 436 aa17.06■□□□□ 0.32
SETDB2-204ENST00000481439 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
SETDB2-204ENST00000481439 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
SETDB2-204ENST00000481439 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
SETDB2-204ENST00000481439 MKRN1Q9UHC7 482 aaKnown RBP17.06■□□□□ 0.32
SETDB2-204ENST00000481439 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
SETDB2-204ENST00000481439 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
SETDB2-204ENST00000481439 HSPA1AP0DMV8 641 aaKnown RBP17.05■□□□□ 0.32
SETDB2-204ENST00000481439 HSPA1BP0DMV9 641 aaKnown RBP17.05■□□□□ 0.32
SETDB2-204ENST00000481439 MAP1SQ66K74 1059 aaPredicted RBP17.05■□□□□ 0.32
SETDB2-204ENST00000481439 DDX46Q7L014 1031 aaKnown RBP17.05■□□□□ 0.32
SETDB2-204ENST00000481439 SP8Q8IXZ3 490 aa17.05■□□□□ 0.32
SETDB2-204ENST00000481439 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
SETDB2-204ENST00000481439 LTBP1Q14766 1721 aa17.04■□□□□ 0.32
SETDB2-204ENST00000481439 GRAPQ13588 217 aa17.04■□□□□ 0.32
SETDB2-204ENST00000481439 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
SETDB2-204ENST00000481439 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
SETDB2-204ENST00000481439 VPS33BQ9H267 617 aa17.04■□□□□ 0.32
SETDB2-204ENST00000481439 CNTNAP1P78357 1384 aa17.03■□□□□ 0.32
SETDB2-204ENST00000481439 LMOD1P29536 600 aaPredicted RBP17.03■□□□□ 0.32
SETDB2-204ENST00000481439 EPS15P42566 896 aa17.03■□□□□ 0.32
SETDB2-204ENST00000481439 GNAI1P63096 354 aa17.03■□□□□ 0.32
SETDB2-204ENST00000481439 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms