RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 GJB2P29033 226 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 PTH1RQ03431 593 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 ADCK5Q3MIX3 580 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 KRT28Q7Z3Y7 464 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 MTMR6Q9Y217 621 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 ADGRL3Q9HAR2 1447 aa15.9■□□□□ 0.14
PDZRN3-208ENST00000479530 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
PDZRN3-208ENST00000479530 AOX1Q06278 1338 aa15.89■□□□□ 0.13
PDZRN3-208ENST00000479530 ST3GAL1Q11201 340 aa15.89■□□□□ 0.13
PDZRN3-208ENST00000479530 PDIA6Q15084 440 aa15.89■□□□□ 0.13
PDZRN3-208ENST00000479530 KSR2Q6VAB6 950 aa15.89■□□□□ 0.13
PDZRN3-208ENST00000479530 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
PDZRN3-208ENST00000479530 AMOTQ4VCS5 1084 aa15.88■□□□□ 0.13
PDZRN3-208ENST00000479530 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
PDZRN3-208ENST00000479530 MYL6BP14649 208 aa15.88■□□□□ 0.13
PDZRN3-208ENST00000479530 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
PDZRN3-208ENST00000479530 SIL1Q9H173 461 aa15.88■□□□□ 0.13
PDZRN3-208ENST00000479530 TLR7Q9NYK1 1049 aaKnown RBP15.88■□□□□ 0.13
PDZRN3-208ENST00000479530 CABLES1Q8TDN4 633 aa15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 CCDC8Q9H0W5 538 aaPredicted RBP15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 CHD2O14647 1828 aaKnown RBP15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 SASH1O94885 1247 aa15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 CAMK4Q16566 473 aa15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 CNTROBQ8N137 903 aa15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 U2AF2P26368 475 aaKnown RBP eCLIP15.87■□□□□ 0.13
PDZRN3-208ENST00000479530 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 PTGS1P23219 599 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 AACSQ86V21 672 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 NFATC2IPQ8NCF5 419 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 UTP14CQ5TAP6 766 aaKnown RBP15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 FERMT3Q86UX7 667 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 PROSER2Q86WR7 435 aaPredicted RBP15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 PDCL2Q8N4E4 241 aa15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 EAF2Q96CJ1 260 aaPredicted RBP15.86■□□□□ 0.13
PDZRN3-208ENST00000479530 EPB41L2O43491 1005 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 MTX1Q13505 466 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 EPHA10Q5JZY3 1008 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 LUZP1Q86V48 1076 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 FAM227BQ96M60 508 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 NLRP2Q9NX02 1062 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 IGSF3O75054 1194 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 LIG1P18858 919 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 LRMPQ12912 555 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 TTC6Q86TZ1 520 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
PDZRN3-208ENST00000479530 GRM8O00222 908 aa15.84■□□□□ 0.13
PDZRN3-208ENST00000479530 ME3Q16798 604 aa15.84■□□□□ 0.13
PDZRN3-208ENST00000479530 CACNA1FO60840 1977 aa15.84■□□□□ 0.13
PDZRN3-208ENST00000479530 GLRX3O76003 335 aaKnown RBP15.84■□□□□ 0.13
PDZRN3-208ENST00000479530 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
PDZRN3-208ENST00000479530 PDRG1Q9NUG6 133 aa15.84■□□□□ 0.13
PDZRN3-208ENST00000479530 ALDH1L1O75891 902 aa15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 CHRNA2Q15822 529 aa15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 CKAP2LQ8IYA6 745 aa15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 EDC3Q96F86 508 aaKnown RBP15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 DIAPH3Q9NSV4 1193 aa15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 NRBP1Q9UHY1 535 aa15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.13
PDZRN3-208ENST00000479530 KDM3BQ7LBC6 1761 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 CHGBP05060 677 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 CCDC192P0DO97 292 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 ANKRD7Q92527 254 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 USP16Q9Y5T5 823 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 MRVI1Q9Y6F6 885 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 ERBB3P21860 1342 aa15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
PDZRN3-208ENST00000479530 CDC37L1Q7L3B6 337 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 LINS1Q8NG48 757 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 DDX21Q9NR30 783 aaKnown RBP eCLIP15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 NDUFB9Q9Y6M9 179 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 HSP90AB4PQ58FF6 505 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 ZNF496Q96IT1 587 aaPredicted RBP15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 BOLA2Q9H3K6 86 aa15.82■□□□□ 0.12
PDZRN3-208ENST00000479530 NPHP4O75161 1426 aaPredicted RBP15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 CTIFO43310 598 aaKnown RBP15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 TYRO3Q06418 890 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 NAA30Q147X3 362 aaPredicted RBP15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 CCDC186Q7Z3E2 898 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 FAM200AQ8TCP9 573 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 TCEANC2Q96MN5 208 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 TTC41PQ6P2S7 1318 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 CHAF1AQ13111 956 aaPredicted RBP15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 VPS53Q5VIR6 699 aa15.81■□□□□ 0.12
PDZRN3-208ENST00000479530 C16orf45Q96MC5 204 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms