RNA–Protein interactions for RNA: ENST00000479413.1

C9orf85-205, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 1 (best)

Gene C9orf85, Length 902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-205ENST00000479413 PASKQ96RG2 1323 aa18.77■□□□□ 0.6
C9orf85-205ENST00000479413 FZD9O00144 591 aa18.77■□□□□ 0.6
C9orf85-205ENST00000479413 GPC2Q8N158 579 aa18.77■□□□□ 0.6
C9orf85-205ENST00000479413 UBN2Q6ZU65 1347 aa18.76■□□□□ 0.59
C9orf85-205ENST00000479413 CAPN15O75808 1086 aa18.76■□□□□ 0.59
C9orf85-205ENST00000479413 HOXA10P31260 410 aaPredicted RBP18.76■□□□□ 0.59
C9orf85-205ENST00000479413 RBM17Q96I25 401 aaKnown RBP18.76■□□□□ 0.59
C9orf85-205ENST00000479413 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
C9orf85-205ENST00000479413 CNTNAP1P78357 1384 aa18.76■□□□□ 0.59
C9orf85-205ENST00000479413 RNF123Q5XPI4 1314 aa18.75■□□□□ 0.59
C9orf85-205ENST00000479413 SNED1Q8TER0 1413 aa18.75■□□□□ 0.59
C9orf85-205ENST00000479413 TMEM88BA6NKF7 163 aa18.75■□□□□ 0.59
C9orf85-205ENST00000479413 PPP1R42Q7Z4L9 355 aa18.75■□□□□ 0.59
C9orf85-205ENST00000479413 EIF6P56537 245 aaKnown RBP18.74■□□□□ 0.59
C9orf85-205ENST00000479413 SUSD4Q5VX71 490 aa18.74■□□□□ 0.59
C9orf85-205ENST00000479413 GIGYF2Q6Y7W6 1299 aaKnown RBP18.74■□□□□ 0.59
C9orf85-205ENST00000479413 ZNF34Q8IZ26 560 aa18.74■□□□□ 0.59
C9orf85-205ENST00000479413 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
C9orf85-205ENST00000479413 TMX4Q9H1E5 349 aaPredicted RBP18.74■□□□□ 0.59
C9orf85-205ENST00000479413 ADAMTSL1Q8N6G6 1762 aa18.73■□□□□ 0.59
C9orf85-205ENST00000479413 PPEF1O14829 653 aaPredicted RBP18.73■□□□□ 0.59
C9orf85-205ENST00000479413 ITGBL1O95965 494 aaPredicted RBP18.73■□□□□ 0.59
C9orf85-205ENST00000479413 LMOD1P29536 600 aaPredicted RBP18.73■□□□□ 0.59
C9orf85-205ENST00000479413 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
C9orf85-205ENST00000479413 NTSR2O95665 410 aa18.72■□□□□ 0.59
C9orf85-205ENST00000479413 LMOD3Q0VAK6 560 aa18.72■□□□□ 0.59
C9orf85-205ENST00000479413 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
C9orf85-205ENST00000479413 GJA3Q9Y6H8 435 aa18.72■□□□□ 0.59
C9orf85-205ENST00000479413 EIF2S2P20042 333 aaKnown RBP18.71■□□□□ 0.59
C9orf85-205ENST00000479413 RIPK4P57078 832 aa18.71■□□□□ 0.59
C9orf85-205ENST00000479413 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
C9orf85-205ENST00000479413 AIDAQ96BJ3 306 aa18.71■□□□□ 0.59
C9orf85-205ENST00000479413 NLRP3Q96P20 1036 aa18.71■□□□□ 0.59
C9orf85-205ENST00000479413 BABAM1Q9NWV8 329 aa18.71■□□□□ 0.59
C9orf85-205ENST00000479413 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
C9orf85-205ENST00000479413 MAP1SQ66K74 1059 aaPredicted RBP18.7■□□□□ 0.58
C9orf85-205ENST00000479413 UTP14AQ9BVJ6 771 aaKnown RBP18.7■□□□□ 0.58
C9orf85-205ENST00000479413 RALBP1Q15311 655 aa18.69■□□□□ 0.58
C9orf85-205ENST00000479413 NIM1KQ8IY84 436 aa18.69■□□□□ 0.58
C9orf85-205ENST00000479413 COL4A5P29400 1685 aa18.69■□□□□ 0.58
C9orf85-205ENST00000479413 VEGFBP49765 207 aa18.68■□□□□ 0.58
C9orf85-205ENST00000479413 HSP90AB3PQ58FF7 597 aa18.68■□□□□ 0.58
C9orf85-205ENST00000479413 C3orf67Q6ZVT6 689 aa18.68■□□□□ 0.58
C9orf85-205ENST00000479413 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
C9orf85-205ENST00000479413 PDIA6Q15084 440 aa18.67■□□□□ 0.58
C9orf85-205ENST00000479413 LRP10Q7Z4F1 713 aa18.67■□□□□ 0.58
C9orf85-205ENST00000479413 ATP6V0A2Q9Y487 856 aa18.67■□□□□ 0.58
C9orf85-205ENST00000479413 ANKRD36CQ5JPF3 1778 aa18.66■□□□□ 0.58
C9orf85-205ENST00000479413 FOXN1O15353 648 aa18.66■□□□□ 0.58
C9orf85-205ENST00000479413 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
C9orf85-205ENST00000479413 PROSER3Q2NL68 480 aa18.66■□□□□ 0.58
C9orf85-205ENST00000479413 SLC10A5Q5PT55 438 aa18.66■□□□□ 0.58
C9orf85-205ENST00000479413 SUPT20HQ8NEM7 779 aa18.66■□□□□ 0.58
C9orf85-205ENST00000479413 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
C9orf85-205ENST00000479413 ABT1Q9ULW3 272 aaKnown RBP18.66■□□□□ 0.58
C9orf85-205ENST00000479413 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
C9orf85-205ENST00000479413 ANXA1P04083 346 aa18.65■□□□□ 0.58
C9orf85-205ENST00000479413 CTCFP49711 727 aaPredicted RBP18.65■□□□□ 0.58
C9orf85-205ENST00000479413 SCNN1DP51172 638 aa18.65■□□□□ 0.58
C9orf85-205ENST00000479413 DEFB115Q30KQ5 88 aa18.65■□□□□ 0.58
C9orf85-205ENST00000479413 ABCC4O15439 1325 aa18.65■□□□□ 0.58
C9orf85-205ENST00000479413 LTBP1Q14766 1721 aa18.65■□□□□ 0.58
C9orf85-205ENST00000479413 EPS15P42566 896 aa18.64■□□□□ 0.57
C9orf85-205ENST00000479413 AIMP1Q12904 312 aaKnown RBP18.64■□□□□ 0.57
C9orf85-205ENST00000479413 AOC3Q16853 763 aa18.64■□□□□ 0.57
C9orf85-205ENST00000479413 USP50Q70EL3 339 aaPredicted RBP18.64■□□□□ 0.57
C9orf85-205ENST00000479413 COPS6Q7L5N1 327 aa18.64■□□□□ 0.57
C9orf85-205ENST00000479413 NECTIN2Q92692 538 aa18.64■□□□□ 0.57
C9orf85-205ENST00000479413 PRDM10Q9NQV6 1147 aa18.64■□□□□ 0.57
C9orf85-205ENST00000479413 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
C9orf85-205ENST00000479413 BBOX1O75936 387 aa18.63■□□□□ 0.57
C9orf85-205ENST00000479413 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
C9orf85-205ENST00000479413 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 DPP8Q6V1X1 898 aaPredicted RBP18.62■□□□□ 0.57
C9orf85-205ENST00000479413 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
C9orf85-205ENST00000479413 SLC51AQ86UW1 340 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 WBP1LQ9NX94 342 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 TRMT112Q9UI30 125 aaKnown RBP18.62■□□□□ 0.57
C9orf85-205ENST00000479413 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 SH3TC1Q8TE82 1336 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 LAMB2P55268 1798 aa18.62■□□□□ 0.57
C9orf85-205ENST00000479413 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
C9orf85-205ENST00000479413 WDR33Q9C0J8 1336 aaKnown RBP18.61■□□□□ 0.57
C9orf85-205ENST00000479413 HCLS1P14317 486 aaPredicted RBP18.61■□□□□ 0.57
C9orf85-205ENST00000479413 TCIRG1Q13488 830 aa18.61■□□□□ 0.57
C9orf85-205ENST00000479413 SP8Q8IXZ3 490 aa18.61■□□□□ 0.57
C9orf85-205ENST00000479413 RTFDC1Q9BY42 306 aaPredicted RBP18.61■□□□□ 0.57
C9orf85-205ENST00000479413 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
C9orf85-205ENST00000479413 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
C9orf85-205ENST00000479413 CCDC146Q8IYE0 955 aa18.6■□□□□ 0.57
C9orf85-205ENST00000479413 MPNDQ8N594 471 aa18.6■□□□□ 0.57
C9orf85-205ENST00000479413 ADARB2Q9NS39 739 aaKnown RBP18.6■□□□□ 0.57
C9orf85-205ENST00000479413 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
C9orf85-205ENST00000479413 CHL1O00533 1208 aa18.59■□□□□ 0.57
C9orf85-205ENST00000479413 CXCL9Q07325 125 aa18.59■□□□□ 0.57
C9orf85-205ENST00000479413 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
C9orf85-205ENST00000479413 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
C9orf85-205ENST00000479413 TMC4Q7Z404 712 aa18.59■□□□□ 0.57
C9orf85-205ENST00000479413 CDHR2Q9BYE9 1310 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms