RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 EIF2S2P20042 333 aaKnown RBP15.47■□□□□ 0.07
CPSF7-211ENST00000477890 EPHX2P34913 555 aa15.47■□□□□ 0.07
CPSF7-211ENST00000477890 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
CPSF7-211ENST00000477890 ZNF34Q8IZ26 560 aa15.47■□□□□ 0.07
CPSF7-211ENST00000477890 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
CPSF7-211ENST00000477890 JDP2Q8WYK2 163 aa15.47■□□□□ 0.07
CPSF7-211ENST00000477890 RIC1Q4ADV7 1423 aa15.46■□□□□ 0.07
CPSF7-211ENST00000477890 NTSR2O95665 410 aa15.46■□□□□ 0.07
CPSF7-211ENST00000477890 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-211ENST00000477890 RIPK4P57078 832 aa15.46■□□□□ 0.07
CPSF7-211ENST00000477890 CC2D2BQ6DHV5 1058 aa15.46■□□□□ 0.07
CPSF7-211ENST00000477890 RBM17Q96I25 401 aaKnown RBP15.46■□□□□ 0.07
CPSF7-211ENST00000477890 ADAMTSL1Q8N6G6 1762 aa15.45■□□□□ 0.06
CPSF7-211ENST00000477890 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
CPSF7-211ENST00000477890 CAPN15O75808 1086 aa15.45■□□□□ 0.06
CPSF7-211ENST00000477890 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
CPSF7-211ENST00000477890 GPC2Q8N158 579 aa15.45■□□□□ 0.06
CPSF7-211ENST00000477890 PPEF1O14829 653 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-211ENST00000477890 ITGBL1O95965 494 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-211ENST00000477890 EIF6P56537 245 aaKnown RBP15.44■□□□□ 0.06
CPSF7-211ENST00000477890 PDIA6Q15084 440 aa15.44■□□□□ 0.06
CPSF7-211ENST00000477890 PARP10Q53GL7 1025 aa15.44■□□□□ 0.06
CPSF7-211ENST00000477890 PNMA8AQ86V59 439 aaPredicted RBP15.44■□□□□ 0.06
CPSF7-211ENST00000477890 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
CPSF7-211ENST00000477890 GJA3Q9Y6H8 435 aa15.44■□□□□ 0.06
CPSF7-211ENST00000477890 CNTNAP1P78357 1384 aa15.44■□□□□ 0.06
CPSF7-211ENST00000477890 COL4A5P29400 1685 aa15.44■□□□□ 0.06
CPSF7-211ENST00000477890 TMEM88BA6NKF7 163 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 ANXA1P04083 346 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
CPSF7-211ENST00000477890 RALBP1Q15311 655 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 GRIPAP1Q4V328 841 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 C3orf67Q6ZVT6 689 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 NLRP3Q96P20 1036 aa15.43■□□□□ 0.06
CPSF7-211ENST00000477890 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
CPSF7-211ENST00000477890 PROSER3Q2NL68 480 aa15.42■□□□□ 0.06
CPSF7-211ENST00000477890 MAP1SQ66K74 1059 aaPredicted RBP15.42■□□□□ 0.06
CPSF7-211ENST00000477890 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
CPSF7-211ENST00000477890 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
CPSF7-211ENST00000477890 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
CPSF7-211ENST00000477890 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
CPSF7-211ENST00000477890 LMOD1P29536 600 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-211ENST00000477890 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
CPSF7-211ENST00000477890 TMX4Q9H1E5 349 aaPredicted RBP15.41■□□□□ 0.06
CPSF7-211ENST00000477890 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
CPSF7-211ENST00000477890 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
CPSF7-211ENST00000477890 NEUROD2Q15784 382 aa15.4■□□□□ 0.06
CPSF7-211ENST00000477890 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
CPSF7-211ENST00000477890 NIM1KQ8IY84 436 aa15.4■□□□□ 0.06
CPSF7-211ENST00000477890 LAMB2P55268 1798 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 VEGFBP49765 207 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 HSP90AB3PQ58FF7 597 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 SLC10A5Q5PT55 438 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 CCDC146Q8IYE0 955 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 XAGE3Q8WTP9 111 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 ABCC4O15439 1325 aa15.39■□□□□ 0.05
CPSF7-211ENST00000477890 FOXN1O15353 648 aa15.38■□□□□ 0.05
CPSF7-211ENST00000477890 EPS15P42566 896 aa15.38■□□□□ 0.05
CPSF7-211ENST00000477890 SCNN1DP51172 638 aa15.38■□□□□ 0.05
CPSF7-211ENST00000477890 AOC3Q16853 763 aa15.38■□□□□ 0.05
CPSF7-211ENST00000477890 ATP6V0A2Q9Y487 856 aa15.38■□□□□ 0.05
CPSF7-211ENST00000477890 HCLS1P14317 486 aaPredicted RBP15.37■□□□□ 0.05
CPSF7-211ENST00000477890 KRT24Q2M2I5 525 aa15.37■□□□□ 0.05
CPSF7-211ENST00000477890 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
CPSF7-211ENST00000477890 LAS1LQ9Y4W2 734 aaKnown RBP15.37■□□□□ 0.05
CPSF7-211ENST00000477890 MYBBP1AQ9BQG0 1328 aaKnown RBP15.37■□□□□ 0.05
CPSF7-211ENST00000477890 DDX10Q13206 875 aaKnown RBP15.36■□□□□ 0.05
CPSF7-211ENST00000477890 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
CPSF7-211ENST00000477890 DEFB115Q30KQ5 88 aa15.36■□□□□ 0.05
CPSF7-211ENST00000477890 SUPT20HQ8NEM7 779 aa15.36■□□□□ 0.05
CPSF7-211ENST00000477890 AIDAQ96BJ3 306 aa15.36■□□□□ 0.05
CPSF7-211ENST00000477890 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
CPSF7-211ENST00000477890 TRMT112Q9UI30 125 aaKnown RBP15.36■□□□□ 0.05
CPSF7-211ENST00000477890 ABT1Q9ULW3 272 aaKnown RBP15.36■□□□□ 0.05
CPSF7-211ENST00000477890 RASSF10A6NK89 507 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 CHL1O00533 1208 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 BBOX1O75936 387 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 DPP8Q6V1X1 898 aaPredicted RBP15.35■□□□□ 0.05
CPSF7-211ENST00000477890 RUNDC1Q96C34 613 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 VPS33BQ9H267 617 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 SH3TC1Q8TE82 1336 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 TAF1P21675 1872 aa15.35■□□□□ 0.05
CPSF7-211ENST00000477890 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.05
CPSF7-211ENST00000477890 USP50Q70EL3 339 aaPredicted RBP15.34■□□□□ 0.05
CPSF7-211ENST00000477890 DDX46Q7L014 1031 aaKnown RBP15.34■□□□□ 0.05
CPSF7-211ENST00000477890 SP8Q8IXZ3 490 aa15.34■□□□□ 0.05
CPSF7-211ENST00000477890 MPNDQ8N594 471 aa15.34■□□□□ 0.05
CPSF7-211ENST00000477890 ZNF428Q96B54 188 aa15.34■□□□□ 0.05
CPSF7-211ENST00000477890 RTFDC1Q9BY42 306 aaPredicted RBP15.34■□□□□ 0.05
CPSF7-211ENST00000477890 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
CPSF7-211ENST00000477890 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
CPSF7-211ENST00000477890 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
CPSF7-211ENST00000477890 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.05
CPSF7-211ENST00000477890 CTCFP49711 727 aaPredicted RBP15.33■□□□□ 0.04
CPSF7-211ENST00000477890 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.04
CPSF7-211ENST00000477890 CXCL9Q07325 125 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms