RNA–Protein interactions for RNA: ENST00000477781.3

RN7SL578P-201, Transcript of RNA, 7SL, cytoplasmic 578, pseudogene, humanhuman

BASIC

Gene RN7SL578P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL578P-201ENST00000477781 COL13A1Q5TAT6 717 aaPredicted RBP16.87■□□□□ 0.29
RN7SL578P-201ENST00000477781 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
RN7SL578P-201ENST00000477781 PSMD1Q99460 953 aa16.87■□□□□ 0.29
RN7SL578P-201ENST00000477781 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
RN7SL578P-201ENST00000477781 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
RN7SL578P-201ENST00000477781 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
RN7SL578P-201ENST00000477781 CREBZFQ9NS37 354 aa16.86■□□□□ 0.29
RN7SL578P-201ENST00000477781 LAMB2P55268 1798 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 ADAMTSL1Q8N6G6 1762 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 ANXA1P04083 346 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 LMOD3Q0VAK6 560 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 PROSER3Q2NL68 480 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 CRAMP1Q96RY5 1269 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
RN7SL578P-201ENST00000477781 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
RN7SL578P-201ENST00000477781 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
RN7SL578P-201ENST00000477781 JDP2Q8WYK2 163 aa16.84■□□□□ 0.29
RN7SL578P-201ENST00000477781 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
RN7SL578P-201ENST00000477781 COL4A5P29400 1685 aa16.84■□□□□ 0.29
RN7SL578P-201ENST00000477781 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 ITGBL1O95965 494 aaPredicted RBP16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 EPHX2P34913 555 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 SLC10A5Q5PT55 438 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 SLC51AQ86UW1 340 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 GPC2Q8N158 579 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 NECTIN2Q92692 538 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 NLRP3Q96P20 1036 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 PASKQ96RG2 1323 aa16.83■□□□□ 0.28
RN7SL578P-201ENST00000477781 TAF1P21675 1872 aa16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 CHL1O00533 1208 aa16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 HSPA1AP0DMV8 641 aaKnown RBP16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 HSPA1BP0DMV9 641 aaKnown RBP16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 UTP14AQ9BVJ6 771 aaKnown RBP16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 MKRN1Q9UHC7 482 aaKnown RBP16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 CLEC11AQ9Y240 323 aa16.82■□□□□ 0.28
RN7SL578P-201ENST00000477781 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
RN7SL578P-201ENST00000477781 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
RN7SL578P-201ENST00000477781 XAGE3Q8WTP9 111 aa16.81■□□□□ 0.28
RN7SL578P-201ENST00000477781 RUNDC1Q96C34 613 aa16.81■□□□□ 0.28
RN7SL578P-201ENST00000477781 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
RN7SL578P-201ENST00000477781 LTBP1Q14766 1721 aa16.8■□□□□ 0.28
RN7SL578P-201ENST00000477781 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
RN7SL578P-201ENST00000477781 KRT24Q2M2I5 525 aa16.8■□□□□ 0.28
RN7SL578P-201ENST00000477781 LARGE2Q8N3Y3 721 aa16.8■□□□□ 0.28
RN7SL578P-201ENST00000477781 LAS1LQ9Y4W2 734 aaKnown RBP16.8■□□□□ 0.28
RN7SL578P-201ENST00000477781 GJA3Q9Y6H8 435 aa16.8■□□□□ 0.28
RN7SL578P-201ENST00000477781 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
RN7SL578P-201ENST00000477781 NLRP10Q86W26 655 aa16.79■□□□□ 0.28
RN7SL578P-201ENST00000477781 DDX21Q9NR30 783 aaKnown RBP eCLIP16.79■□□□□ 0.28
RN7SL578P-201ENST00000477781 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
RN7SL578P-201ENST00000477781 ABCC4O15439 1325 aa16.78■□□□□ 0.28
RN7SL578P-201ENST00000477781 TMEM88BA6NKF7 163 aa16.78■□□□□ 0.28
RN7SL578P-201ENST00000477781 TCIRG1Q13488 830 aa16.78■□□□□ 0.28
RN7SL578P-201ENST00000477781 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
RN7SL578P-201ENST00000477781 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
RN7SL578P-201ENST00000477781 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
RN7SL578P-201ENST00000477781 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.28
RN7SL578P-201ENST00000477781 CNTROBQ8N137 903 aa16.77■□□□□ 0.28
RN7SL578P-201ENST00000477781 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
RN7SL578P-201ENST00000477781 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.28
RN7SL578P-201ENST00000477781 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
RN7SL578P-201ENST00000477781 CNTNAP1P78357 1384 aa16.77■□□□□ 0.27
RN7SL578P-201ENST00000477781 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
RN7SL578P-201ENST00000477781 BBOX1O75936 387 aa16.76■□□□□ 0.27
RN7SL578P-201ENST00000477781 SCNN1DP51172 638 aa16.76■□□□□ 0.27
RN7SL578P-201ENST00000477781 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
RN7SL578P-201ENST00000477781 PPIP5K2O43314 1243 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 LMOD1P29536 600 aaPredicted RBP16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 EPS15P42566 896 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 AOC3Q16853 763 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 SP8Q8IXZ3 490 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 TRPM7Q96QT4 1865 aa16.75■□□□□ 0.27
RN7SL578P-201ENST00000477781 SH3TC1Q8TE82 1336 aa16.74■□□□□ 0.27
RN7SL578P-201ENST00000477781 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
RN7SL578P-201ENST00000477781 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
RN7SL578P-201ENST00000477781 HOXB7P09629 217 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 VEGFBP49765 207 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 ZNF428Q96B54 188 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 DBF4Q9UBU7 674 aaPredicted RBP16.73■□□□□ 0.27
RN7SL578P-201ENST00000477781 CXCL9Q07325 125 aa16.72■□□□□ 0.27
RN7SL578P-201ENST00000477781 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
RN7SL578P-201ENST00000477781 USP50Q70EL3 339 aaPredicted RBP16.72■□□□□ 0.27
RN7SL578P-201ENST00000477781 MPNDQ8N594 471 aa16.72■□□□□ 0.27
RN7SL578P-201ENST00000477781 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms