RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 GTF2E1P29083 439 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-228ENST00000476267 SLC51AQ86UW1 340 aa17.3■□□□□ 0.36
MRPL55-228ENST00000476267 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
MRPL55-228ENST00000476267 SYNE4Q8N205 404 aa17.3■□□□□ 0.36
MRPL55-228ENST00000476267 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
MRPL55-228ENST00000476267 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
MRPL55-228ENST00000476267 RALBP1Q15311 655 aa17.29■□□□□ 0.36
MRPL55-228ENST00000476267 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
MRPL55-228ENST00000476267 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
MRPL55-228ENST00000476267 ITGBL1O95965 494 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-228ENST00000476267 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
MRPL55-228ENST00000476267 RIPK4P57078 832 aa17.28■□□□□ 0.36
MRPL55-228ENST00000476267 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
MRPL55-228ENST00000476267 HSPA1AP0DMV8 641 aaKnown RBP17.27■□□□□ 0.36
MRPL55-228ENST00000476267 HSPA1BP0DMV9 641 aaKnown RBP17.27■□□□□ 0.36
MRPL55-228ENST00000476267 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
MRPL55-228ENST00000476267 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
MRPL55-228ENST00000476267 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
MRPL55-228ENST00000476267 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
MRPL55-228ENST00000476267 GPC2Q8N158 579 aa17.26■□□□□ 0.35
MRPL55-228ENST00000476267 RPGRQ92834 1020 aaKnown RBP17.26■□□□□ 0.35
MRPL55-228ENST00000476267 HACL1Q9UJ83 578 aa17.26■□□□□ 0.35
MRPL55-228ENST00000476267 CNTNAP1P78357 1384 aa17.26■□□□□ 0.35
MRPL55-228ENST00000476267 ANXA1P04083 346 aa17.25■□□□□ 0.35
MRPL55-228ENST00000476267 EPHX2P34913 555 aa17.25■□□□□ 0.35
MRPL55-228ENST00000476267 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
MRPL55-228ENST00000476267 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
MRPL55-228ENST00000476267 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
MRPL55-228ENST00000476267 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-228ENST00000476267 RBM17Q96I25 401 aaKnown RBP17.24■□□□□ 0.35
MRPL55-228ENST00000476267 LRRC37AA6NMS7 1700 aa17.24■□□□□ 0.35
MRPL55-228ENST00000476267 MYBBP1AQ9BQG0 1328 aaKnown RBP17.23■□□□□ 0.35
MRPL55-228ENST00000476267 CHL1O00533 1208 aa17.23■□□□□ 0.35
MRPL55-228ENST00000476267 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
MRPL55-228ENST00000476267 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
MRPL55-228ENST00000476267 MKRN1Q9UHC7 482 aaKnown RBP17.23■□□□□ 0.35
MRPL55-228ENST00000476267 TRIM35Q9UPQ4 493 aa17.23■□□□□ 0.35
MRPL55-228ENST00000476267 KRT24Q2M2I5 525 aa17.22■□□□□ 0.35
MRPL55-228ENST00000476267 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-228ENST00000476267 PNMA8AQ86V59 439 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-228ENST00000476267 JDP2Q8WYK2 163 aa17.22■□□□□ 0.35
MRPL55-228ENST00000476267 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
MRPL55-228ENST00000476267 DUOX1Q9NRD9 1551 aa17.22■□□□□ 0.35
MRPL55-228ENST00000476267 ABCC4O15439 1325 aa17.21■□□□□ 0.35
MRPL55-228ENST00000476267 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
MRPL55-228ENST00000476267 SCNN1DP51172 638 aa17.21■□□□□ 0.35
MRPL55-228ENST00000476267 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
MRPL55-228ENST00000476267 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
MRPL55-228ENST00000476267 ATP6V0A2Q9Y487 856 aa17.21■□□□□ 0.35
MRPL55-228ENST00000476267 TAF1P21675 1872 aa17.2■□□□□ 0.34
MRPL55-228ENST00000476267 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
MRPL55-228ENST00000476267 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
MRPL55-228ENST00000476267 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
MRPL55-228ENST00000476267 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
MRPL55-228ENST00000476267 DDX21Q9NR30 783 aaKnown RBP eCLIP17.2■□□□□ 0.34
MRPL55-228ENST00000476267 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
MRPL55-228ENST00000476267 MAP1SQ66K74 1059 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-228ENST00000476267 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
MRPL55-228ENST00000476267 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
MRPL55-228ENST00000476267 COL4A1P02462 1669 aa17.19■□□□□ 0.34
MRPL55-228ENST00000476267 DDX10Q13206 875 aaKnown RBP17.18■□□□□ 0.34
MRPL55-228ENST00000476267 TCIRG1Q13488 830 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 HSP90AB3PQ58FF7 597 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 CNTROBQ8N137 903 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 NECTIN2Q92692 538 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 VPS33BQ9H267 617 aa17.18■□□□□ 0.34
MRPL55-228ENST00000476267 RASSF10A6NK89 507 aa17.17■□□□□ 0.34
MRPL55-228ENST00000476267 TCERG1O14776 1098 aaKnown RBP17.17■□□□□ 0.34
MRPL55-228ENST00000476267 EPS15P42566 896 aa17.17■□□□□ 0.34
MRPL55-228ENST00000476267 VEGFBP49765 207 aa17.17■□□□□ 0.34
MRPL55-228ENST00000476267 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
MRPL55-228ENST00000476267 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
MRPL55-228ENST00000476267 HOXB7P09629 217 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
MRPL55-228ENST00000476267 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 AOC3Q16853 763 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 SP8Q8IXZ3 490 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 TRPM7Q96QT4 1865 aa17.16■□□□□ 0.34
MRPL55-228ENST00000476267 FOXN1O15353 648 aa17.15■□□□□ 0.34
MRPL55-228ENST00000476267 PPIP5K2O43314 1243 aa17.15■□□□□ 0.34
MRPL55-228ENST00000476267 BBOX1O75936 387 aa17.15■□□□□ 0.34
MRPL55-228ENST00000476267 HCLS1P14317 486 aaPredicted RBP17.15■□□□□ 0.34
MRPL55-228ENST00000476267 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
MRPL55-228ENST00000476267 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
MRPL55-228ENST00000476267 USP50Q70EL3 339 aaPredicted RBP17.14■□□□□ 0.33
MRPL55-228ENST00000476267 ISCA1Q9BUE6 129 aa17.14■□□□□ 0.33
MRPL55-228ENST00000476267 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
MRPL55-228ENST00000476267 LMOD1P29536 600 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-228ENST00000476267 CXCL9Q07325 125 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 GRAPQ13588 217 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
MRPL55-228ENST00000476267 GRAPLQ8TC17 118 aaPredicted RBP17.13■□□□□ 0.33
MRPL55-228ENST00000476267 CFAP44Q96MT7 982 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms