RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 CRY2Q49AN0 593 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 PARP10Q53GL7 1025 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 EAPPQ56P03 285 aaPredicted RBP11.01□□□□□ -0.65
SATB1-213ENST00000476178 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 JMYQ8N9B5 988 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 NLRP3Q96P20 1036 aa11.01□□□□□ -0.65
SATB1-213ENST00000476178 UTP14AQ9BVJ6 771 aaKnown RBP11.01□□□□□ -0.65
SATB1-213ENST00000476178 CACNA1SQ13698 1873 aa11□□□□□ -0.65
SATB1-213ENST00000476178 POTEIP0CG38 1075 aa11□□□□□ -0.65
SATB1-213ENST00000476178 POTEJP0CG39 1038 aa11□□□□□ -0.65
SATB1-213ENST00000476178 HACL1Q9UJ83 578 aa11□□□□□ -0.65
SATB1-213ENST00000476178 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
SATB1-213ENST00000476178 ABCC12Q96J65 1359 aa11□□□□□ -0.65
SATB1-213ENST00000476178 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
SATB1-213ENST00000476178 APAF1O14727 1248 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 NTSR2O95665 410 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 HOXA10P31260 410 aaPredicted RBP10.99□□□□□ -0.65
SATB1-213ENST00000476178 EIF6P56537 245 aaKnown RBP10.99□□□□□ -0.65
SATB1-213ENST00000476178 KRT24Q2M2I5 525 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 PROSER3Q2NL68 480 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 GRIPAP1Q4V328 841 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 COPS6Q7L5N1 327 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 LDHDQ86WU2 507 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 LARGE2Q8N3Y3 721 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 XAGE3Q8WTP9 111 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
SATB1-213ENST00000476178 CRAMP1Q96RY5 1269 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 PSMD1Q99460 953 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 TAF1DQ9H5J8 278 aaPredicted RBP10.99□□□□□ -0.65
SATB1-213ENST00000476178 GJA3Q9Y6H8 435 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 ZNF541Q9H0D2 1346 aa10.99□□□□□ -0.65
SATB1-213ENST00000476178 DICER1Q9UPY3 1922 aaKnown RBP10.98□□□□□ -0.65
SATB1-213ENST00000476178 PPEF1O14829 653 aaPredicted RBP10.98□□□□□ -0.65
SATB1-213ENST00000476178 EPHX2P34913 555 aa10.98□□□□□ -0.65
SATB1-213ENST00000476178 HSP90AB3PQ58FF7 597 aa10.98□□□□□ -0.65
SATB1-213ENST00000476178 FZD9O00144 591 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 ZNF853P0CG23 659 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 LMOD1P29536 600 aaPredicted RBP10.97□□□□□ -0.65
SATB1-213ENST00000476178 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 PNMA8AQ86V59 439 aaPredicted RBP10.97□□□□□ -0.65
SATB1-213ENST00000476178 GPC2Q8N158 579 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 CREBZFQ9NS37 354 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
SATB1-213ENST00000476178 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
SATB1-213ENST00000476178 RNF123Q5XPI4 1314 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 IBTKQ9P2D0 1353 aaPredicted RBP10.97□□□□□ -0.65
SATB1-213ENST00000476178 NUP98P52948 1817 aa10.97□□□□□ -0.65
SATB1-213ENST00000476178 HCLS1P14317 486 aaPredicted RBP10.96□□□□□ -0.65
SATB1-213ENST00000476178 TCIRG1Q13488 830 aa10.96□□□□□ -0.65
SATB1-213ENST00000476178 SLC10A5Q5PT55 438 aa10.96□□□□□ -0.65
SATB1-213ENST00000476178 COL13A1Q5TAT6 717 aaPredicted RBP10.96□□□□□ -0.65
SATB1-213ENST00000476178 HDGFL1Q5TGJ6 251 aa10.96□□□□□ -0.65
SATB1-213ENST00000476178 NIM1KQ8IY84 436 aa10.96□□□□□ -0.65
SATB1-213ENST00000476178 ZNF428Q96B54 188 aa10.96□□□□□ -0.65
SATB1-213ENST00000476178 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.65
SATB1-213ENST00000476178 ARFGEF2Q9Y6D5 1785 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 PPIP5K2O43314 1243 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 BBOX1O75936 387 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 HSPA1AP0DMV8 641 aaKnown RBP10.95□□□□□ -0.66
SATB1-213ENST00000476178 HSPA1BP0DMV9 641 aaKnown RBP10.95□□□□□ -0.66
SATB1-213ENST00000476178 DDX46Q7L014 1031 aaKnown RBP10.95□□□□□ -0.66
SATB1-213ENST00000476178 NLRP10Q86W26 655 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 CHPF2Q9P2E5 772 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 ATP6V0A2Q9Y487 856 aa10.95□□□□□ -0.66
SATB1-213ENST00000476178 SH3TC1Q8TE82 1336 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 HOXB7P09629 217 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 AOC3Q16853 763 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
SATB1-213ENST00000476178 DPP8Q6V1X1 898 aaPredicted RBP10.94□□□□□ -0.66
SATB1-213ENST00000476178 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 CNTROBQ8N137 903 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 SUPT20HQ8NEM7 779 aa10.94□□□□□ -0.66
SATB1-213ENST00000476178 DBF4Q9UBU7 674 aaPredicted RBP10.94□□□□□ -0.66
SATB1-213ENST00000476178 RIC1Q4ADV7 1423 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 ABCC4O15439 1325 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 PASKQ96RG2 1323 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 ITGBL1O95965 494 aaPredicted RBP10.93□□□□□ -0.66
SATB1-213ENST00000476178 DUSP27Q5VZP5 1158 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 SP8Q8IXZ3 490 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 TNS4Q8IZW8 715 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 MPNDQ8N594 471 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 PLBD2Q8NHP8 589 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 IFT57Q9NWB7 429 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 HYPKQ9NX55 129 aa10.93□□□□□ -0.66
SATB1-213ENST00000476178 ATP5J2-PTCD1G3V325 749 aa10.92□□□□□ -0.66
SATB1-213ENST00000476178 ELL2O00472 640 aaPredicted RBP10.92□□□□□ -0.66
SATB1-213ENST00000476178 CAPN15O75808 1086 aa10.92□□□□□ -0.66
SATB1-213ENST00000476178 EPS15P42566 896 aa10.92□□□□□ -0.66
SATB1-213ENST00000476178 GNAI1P63096 354 aa10.92□□□□□ -0.66
SATB1-213ENST00000476178 CALD1Q05682 793 aaKnown RBP10.92□□□□□ -0.66
SATB1-213ENST00000476178 VPS33BQ9H267 617 aa10.92□□□□□ -0.66
SATB1-213ENST00000476178 ZNRF3Q9ULT6 936 aa10.92□□□□□ -0.66
SATB1-213ENST00000476178 ABT1Q9ULW3 272 aaKnown RBP10.92□□□□□ -0.66
SATB1-213ENST00000476178 SCN4AP35499 1836 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms