RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 EPHX2P34913 555 aa16.39■□□□□ 0.21
CCDC57-208ENST00000475635 RPGRQ92834 1020 aaKnown RBP16.39■□□□□ 0.21
CCDC57-208ENST00000475635 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
CCDC57-208ENST00000475635 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
CCDC57-208ENST00000475635 COL4A5P29400 1685 aa16.39■□□□□ 0.21
CCDC57-208ENST00000475635 RNF123Q5XPI4 1314 aa16.39■□□□□ 0.21
CCDC57-208ENST00000475635 LTBP1Q14766 1721 aa16.39■□□□□ 0.21
CCDC57-208ENST00000475635 CNTNAP1P78357 1384 aa16.38■□□□□ 0.21
CCDC57-208ENST00000475635 TAF1P21675 1872 aa16.38■□□□□ 0.21
CCDC57-208ENST00000475635 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-208ENST00000475635 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-208ENST00000475635 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
CCDC57-208ENST00000475635 CC2D2BQ6DHV5 1058 aa16.38■□□□□ 0.21
CCDC57-208ENST00000475635 GPC2Q8N158 579 aa16.38■□□□□ 0.21
CCDC57-208ENST00000475635 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
CCDC57-208ENST00000475635 TMEM88BA6NKF7 163 aa16.37■□□□□ 0.21
CCDC57-208ENST00000475635 ZNF34Q8IZ26 560 aa16.37■□□□□ 0.21
CCDC57-208ENST00000475635 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
CCDC57-208ENST00000475635 NTSR2O95665 410 aa16.36■□□□□ 0.21
CCDC57-208ENST00000475635 GIGYF2Q6Y7W6 1299 aaKnown RBP16.36■□□□□ 0.21
CCDC57-208ENST00000475635 PNMA8AQ86V59 439 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-208ENST00000475635 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
CCDC57-208ENST00000475635 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
CCDC57-208ENST00000475635 EIF6P56537 245 aaKnown RBP16.35■□□□□ 0.21
CCDC57-208ENST00000475635 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
CCDC57-208ENST00000475635 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-208ENST00000475635 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
CCDC57-208ENST00000475635 GJA3Q9Y6H8 435 aa16.35■□□□□ 0.21
CCDC57-208ENST00000475635 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
CCDC57-208ENST00000475635 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
CCDC57-208ENST00000475635 EIF2S2P20042 333 aaKnown RBP16.34■□□□□ 0.21
CCDC57-208ENST00000475635 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
CCDC57-208ENST00000475635 PPP1R42Q7Z4L9 355 aa16.34■□□□□ 0.21
CCDC57-208ENST00000475635 SLC51AQ86UW1 340 aa16.34■□□□□ 0.21
CCDC57-208ENST00000475635 CNTROBQ8N137 903 aa16.34■□□□□ 0.21
CCDC57-208ENST00000475635 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
CCDC57-208ENST00000475635 VEGFBP49765 207 aa16.33■□□□□ 0.2
CCDC57-208ENST00000475635 RIPK4P57078 832 aa16.33■□□□□ 0.2
CCDC57-208ENST00000475635 PARP10Q53GL7 1025 aa16.33■□□□□ 0.2
CCDC57-208ENST00000475635 LRP10Q7Z4F1 713 aa16.33■□□□□ 0.2
CCDC57-208ENST00000475635 FOXN1O15353 648 aa16.32■□□□□ 0.2
CCDC57-208ENST00000475635 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
CCDC57-208ENST00000475635 PDIA6Q15084 440 aa16.32■□□□□ 0.2
CCDC57-208ENST00000475635 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
CCDC57-208ENST00000475635 NLRP3Q96P20 1036 aa16.32■□□□□ 0.2
CCDC57-208ENST00000475635 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
CCDC57-208ENST00000475635 ANXA1P04083 346 aa16.31■□□□□ 0.2
CCDC57-208ENST00000475635 ABCC4O15439 1325 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 PPIP5K2O43314 1243 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 EPS15P42566 896 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 SCNN1DP51172 638 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 NIM1KQ8IY84 436 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 AIDAQ96BJ3 306 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 TMX4Q9H1E5 349 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-208ENST00000475635 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
CCDC57-208ENST00000475635 DDX60Q8IY21 1712 aaKnown RBP16.3■□□□□ 0.2
CCDC57-208ENST00000475635 POLR2AP24928 1970 aaKnown RBP16.29■□□□□ 0.2
CCDC57-208ENST00000475635 RASSF10A6NK89 507 aa16.29■□□□□ 0.2
CCDC57-208ENST00000475635 TMPOP42166 694 aaKnown RBP16.29■□□□□ 0.2
CCDC57-208ENST00000475635 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
CCDC57-208ENST00000475635 DEFB115Q30KQ5 88 aa16.29■□□□□ 0.2
CCDC57-208ENST00000475635 SLC10A5Q5PT55 438 aa16.29■□□□□ 0.2
CCDC57-208ENST00000475635 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
CCDC57-208ENST00000475635 ABT1Q9ULW3 272 aaKnown RBP16.29■□□□□ 0.2
CCDC57-208ENST00000475635 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
CCDC57-208ENST00000475635 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
CCDC57-208ENST00000475635 RALBP1Q15311 655 aa16.28■□□□□ 0.2
CCDC57-208ENST00000475635 AOC3Q16853 763 aa16.28■□□□□ 0.2
CCDC57-208ENST00000475635 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
CCDC57-208ENST00000475635 PRDM10Q9NQV6 1147 aa16.28■□□□□ 0.2
CCDC57-208ENST00000475635 DDX21Q9NR30 783 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC57-208ENST00000475635 CTCFP49711 727 aaPredicted RBP16.27■□□□□ 0.2
CCDC57-208ENST00000475635 HSP90AB3PQ58FF7 597 aa16.27■□□□□ 0.2
CCDC57-208ENST00000475635 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
CCDC57-208ENST00000475635 WBP1LQ9NX94 342 aa16.27■□□□□ 0.2
CCDC57-208ENST00000475635 LRRC37AA6NMS7 1700 aa16.27■□□□□ 0.19
CCDC57-208ENST00000475635 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
CCDC57-208ENST00000475635 WDR33Q9C0J8 1336 aaKnown RBP16.26■□□□□ 0.19
CCDC57-208ENST00000475635 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
CCDC57-208ENST00000475635 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
CCDC57-208ENST00000475635 NLRP10Q86W26 655 aa16.26■□□□□ 0.19
CCDC57-208ENST00000475635 VPS33BQ9H267 617 aa16.26■□□□□ 0.19
CCDC57-208ENST00000475635 BBOX1O75936 387 aa16.25■□□□□ 0.19
CCDC57-208ENST00000475635 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-208ENST00000475635 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC57-208ENST00000475635 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
CCDC57-208ENST00000475635 SUPT20HQ8NEM7 779 aa16.25■□□□□ 0.19
CCDC57-208ENST00000475635 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
CCDC57-208ENST00000475635 ZNRF3Q9ULT6 936 aa16.25■□□□□ 0.19
CCDC57-208ENST00000475635 LBX1P52954 281 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 CXCL9Q07325 125 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
CCDC57-208ENST00000475635 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 MPNDQ8N594 471 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 GPRC5DQ9NZD1 345 aa16.24■□□□□ 0.19
CCDC57-208ENST00000475635 TRMT112Q9UI30 125 aaKnown RBP16.24■□□□□ 0.19
CCDC57-208ENST00000475635 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
CCDC57-208ENST00000475635 TRAF5O00463 557 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms