RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 POU4F2Q12837 409 aa8.57□□□□□ -1.04
SDHB-205ENST00000475506 NBPF1Q3BBV0 1214 aa8.57□□□□□ -1.04
SDHB-205ENST00000475506 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
SDHB-205ENST00000475506 CRELD1Q96HD1 420 aa8.57□□□□□ -1.04
SDHB-205ENST00000475506 TSEN34Q9BSV6 310 aaKnown RBP8.57□□□□□ -1.04
SDHB-205ENST00000475506 OSBPL7Q9BZF2 842 aa8.57□□□□□ -1.04
SDHB-205ENST00000475506 TGIF2Q9GZN2 237 aa8.57□□□□□ -1.04
SDHB-205ENST00000475506 ACBD3Q9H3P7 528 aa8.57□□□□□ -1.04
SDHB-205ENST00000475506 ITGAEP38570 1179 aa8.56□□□□□ -1.04
SDHB-205ENST00000475506 TNNI2P48788 182 aa8.56□□□□□ -1.04
SDHB-205ENST00000475506 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
SDHB-205ENST00000475506 XKR5Q6UX68 686 aa8.56□□□□□ -1.04
SDHB-205ENST00000475506 UBXN4Q92575 508 aa8.56□□□□□ -1.04
SDHB-205ENST00000475506 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
SDHB-205ENST00000475506 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
SDHB-205ENST00000475506 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
SDHB-205ENST00000475506 KCNMB2Q9Y691 235 aa8.56□□□□□ -1.04
SDHB-205ENST00000475506 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
SDHB-205ENST00000475506 A0A0G2JS52 829 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
SDHB-205ENST00000475506 SF3A1Q15459 793 aaKnown RBP8.55□□□□□ -1.04
SDHB-205ENST00000475506 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 CCDC74AQ96AQ1 378 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 FRMD6Q96NE9 622 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 ZIC5Q96T25 663 aa8.55□□□□□ -1.04
SDHB-205ENST00000475506 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
SDHB-205ENST00000475506 ARSDP51689 593 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
SDHB-205ENST00000475506 HIF1AQ16665 826 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 PRICKLE2Q7Z3G6 844 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 TTC16Q8NEE8 873 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 CCSER2Q9H7U1 834 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 TMEM63CQ9P1W3 806 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
SDHB-205ENST00000475506 GPC6Q9Y625 555 aaPredicted RBP8.54□□□□□ -1.04
SDHB-205ENST00000475506 NEFLP07196 543 aa8.53□□□□□ -1.04
SDHB-205ENST00000475506 EIF4BP23588 611 aaKnown RBP8.53□□□□□ -1.04
SDHB-205ENST00000475506 ZNF394Q53GI3 561 aa8.53□□□□□ -1.04
SDHB-205ENST00000475506 LRRC69Q6ZNQ3 347 aa8.53□□□□□ -1.04
SDHB-205ENST00000475506 BICDL1Q6ZP65 573 aa8.53□□□□□ -1.04
SDHB-205ENST00000475506 FAM177A1Q8N128 213 aaPredicted RBP8.53□□□□□ -1.04
SDHB-205ENST00000475506 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
SDHB-205ENST00000475506 CAPN10Q9HC96 672 aa8.53□□□□□ -1.04
SDHB-205ENST00000475506 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
SDHB-205ENST00000475506 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 POLR3DP05423 398 aaPredicted RBP8.52□□□□□ -1.05
SDHB-205ENST00000475506 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 PDE12Q6L8Q7 609 aaKnown RBP8.52□□□□□ -1.05
SDHB-205ENST00000475506 ZNF438Q7Z4V0 828 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 SLC43A3Q8NBI5 491 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 CHRDQ9H2X0 955 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 C12orf49Q9H741 205 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
SDHB-205ENST00000475506 PCDHGB7Q9Y5F8 929 aa8.52□□□□□ -1.05
SDHB-205ENST00000475506 CAPN5O15484 640 aaPredicted RBP8.51□□□□□ -1.05
SDHB-205ENST00000475506 RHOQP17081 205 aa8.51□□□□□ -1.05
SDHB-205ENST00000475506 MSX1P28360 303 aa8.51□□□□□ -1.05
SDHB-205ENST00000475506 SNX29Q8TEQ0 813 aa8.51□□□□□ -1.05
SDHB-205ENST00000475506 TANGO6Q9C0B7 1094 aa8.51□□□□□ -1.05
SDHB-205ENST00000475506 SRA1Q9HD15 236 aaKnown RBP8.51□□□□□ -1.05
SDHB-205ENST00000475506 ANKIB1Q9P2G1 1089 aa8.51□□□□□ -1.05
SDHB-205ENST00000475506 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PHACTR2O75167 634 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PRR20EP86478 221 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PRR20CP86479 221 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PRR20DP86480 221 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PRR20BP86481 221 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PRR20AP86496 221 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 PTPN12Q05209 780 aaKnown RBP8.5□□□□□ -1.05
SDHB-205ENST00000475506 TYRO3Q06418 890 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 ARSJQ5FYB0 599 aaPredicted RBP8.5□□□□□ -1.05
SDHB-205ENST00000475506 WDR44Q5JSH3 913 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 NPHS2Q9NP85 383 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 CNTN3Q9P232 1028 aa8.5□□□□□ -1.05
SDHB-205ENST00000475506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.5□□□□□ -1.05
SDHB-205ENST00000475506 A0A1W2PNR3 127 aa8.49□□□□□ -1.05
SDHB-205ENST00000475506 BMP2P12643 396 aa8.49□□□□□ -1.05
SDHB-205ENST00000475506 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
SDHB-205ENST00000475506 C6orf118Q5T5N4 469 aa8.49□□□□□ -1.05
SDHB-205ENST00000475506 LYSMD3Q7Z3D4 306 aa8.49□□□□□ -1.05
SDHB-205ENST00000475506 PRKAG2Q9UGJ0 569 aa8.49□□□□□ -1.05
SDHB-205ENST00000475506 FNDC3AQ9Y2H6 1198 aaKnown RBP8.49□□□□□ -1.05
SDHB-205ENST00000475506 EREGO14944 169 aa8.48□□□□□ -1.05
SDHB-205ENST00000475506 NXPE4Q6UWF7 544 aa8.48□□□□□ -1.05
SDHB-205ENST00000475506 C1orf127Q8N9H9 656 aa8.48□□□□□ -1.05
SDHB-205ENST00000475506 DHX38Q92620 1227 aaKnown RBP8.48□□□□□ -1.05
SDHB-205ENST00000475506 TIMMDC1Q9NPL8 285 aa8.48□□□□□ -1.05
SDHB-205ENST00000475506 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
SDHB-205ENST00000475506 A0A1B0GTH6 734 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 GIPC1O14908 333 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 XYLBO75191 536 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 USP17L7P0C7H9 530 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 USP48Q86UV5 1035 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 GMLQ99445 158 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 BCO2Q9BYV7 579 aa8.47□□□□□ -1.05
SDHB-205ENST00000475506 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms