RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 NTSR2O95665 410 aa21.66■■□□□ 1.06
DKC1-208ENST00000475423 LMOD3Q0VAK6 560 aa21.66■■□□□ 1.06
DKC1-208ENST00000475423 LDHDQ86WU2 507 aa21.65■■□□□ 1.06
DKC1-208ENST00000475423 RPGRQ92834 1020 aaKnown RBP21.65■■□□□ 1.06
DKC1-208ENST00000475423 CRAMP1Q96RY5 1269 aa21.65■■□□□ 1.06
DKC1-208ENST00000475423 EIF2S2P20042 333 aaKnown RBP21.64■■□□□ 1.05
DKC1-208ENST00000475423 GRIPAP1Q4V328 841 aa21.64■■□□□ 1.05
DKC1-208ENST00000475423 PARP10Q53GL7 1025 aa21.64■■□□□ 1.05
DKC1-208ENST00000475423 PPP1R42Q7Z4L9 355 aa21.64■■□□□ 1.05
DKC1-208ENST00000475423 CREBZFQ9NS37 354 aa21.64■■□□□ 1.05
DKC1-208ENST00000475423 MYBBP1AQ9BQG0 1328 aaKnown RBP21.63■■□□□ 1.05
DKC1-208ENST00000475423 DDX10Q13206 875 aaKnown RBP21.63■■□□□ 1.05
DKC1-208ENST00000475423 PROSER3Q2NL68 480 aa21.63■■□□□ 1.05
DKC1-208ENST00000475423 SLC10A5Q5PT55 438 aa21.63■■□□□ 1.05
DKC1-208ENST00000475423 PASKQ96RG2 1323 aa21.62■■□□□ 1.05
DKC1-208ENST00000475423 C3orf67Q6ZVT6 689 aa21.62■■□□□ 1.05
DKC1-208ENST00000475423 RBM17Q96I25 401 aaKnown RBP21.62■■□□□ 1.05
DKC1-208ENST00000475423 HACL1Q9UJ83 578 aa21.62■■□□□ 1.05
DKC1-208ENST00000475423 CHL1O00533 1208 aa21.61■■□□□ 1.05
DKC1-208ENST00000475423 ANXA1P04083 346 aa21.61■■□□□ 1.05
DKC1-208ENST00000475423 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
DKC1-208ENST00000475423 GPC2Q8N158 579 aa21.61■■□□□ 1.05
DKC1-208ENST00000475423 JDP2Q8WYK2 163 aa21.6■■□□□ 1.05
DKC1-208ENST00000475423 NLRP3Q96P20 1036 aa21.6■■□□□ 1.05
DKC1-208ENST00000475423 UTP14AQ9BVJ6 771 aaKnown RBP21.6■■□□□ 1.05
DKC1-208ENST00000475423 COL4A5P29400 1685 aa21.6■■□□□ 1.05
DKC1-208ENST00000475423 ADAMTSL1Q8N6G6 1762 aa21.59■■□□□ 1.05
DKC1-208ENST00000475423 PPEF1O14829 653 aaPredicted RBP21.59■■□□□ 1.05
DKC1-208ENST00000475423 ITGBL1O95965 494 aaPredicted RBP21.59■■□□□ 1.05
DKC1-208ENST00000475423 EPHX2P34913 555 aa21.59■■□□□ 1.05
DKC1-208ENST00000475423 COPS6Q7L5N1 327 aa21.59■■□□□ 1.05
DKC1-208ENST00000475423 CCDC146Q8IYE0 955 aa21.59■■□□□ 1.05
DKC1-208ENST00000475423 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
DKC1-208ENST00000475423 RNF123Q5XPI4 1314 aa21.58■■□□□ 1.05
DKC1-208ENST00000475423 PNMA8AQ86V59 439 aaPredicted RBP21.58■■□□□ 1.05
DKC1-208ENST00000475423 RUNDC1Q96C34 613 aa21.58■■□□□ 1.05
DKC1-208ENST00000475423 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
DKC1-208ENST00000475423 ANKRD36CQ5JPF3 1778 aa21.57■■□□□ 1.04
DKC1-208ENST00000475423 HSPA1AP0DMV8 641 aaKnown RBP21.57■■□□□ 1.04
DKC1-208ENST00000475423 HSPA1BP0DMV9 641 aaKnown RBP21.57■■□□□ 1.04
DKC1-208ENST00000475423 NEUROD2Q15784 382 aa21.57■■□□□ 1.04
DKC1-208ENST00000475423 EAPPQ56P03 285 aaPredicted RBP21.57■■□□□ 1.04
DKC1-208ENST00000475423 HSP90AB3PQ58FF7 597 aa21.57■■□□□ 1.04
DKC1-208ENST00000475423 SLC51AQ86UW1 340 aa21.57■■□□□ 1.04
DKC1-208ENST00000475423 XAGE3Q8WTP9 111 aa21.57■■□□□ 1.04
DKC1-208ENST00000475423 KRT24Q2M2I5 525 aa21.56■■□□□ 1.04
DKC1-208ENST00000475423 NLRP10Q86W26 655 aa21.56■■□□□ 1.04
DKC1-208ENST00000475423 NECTIN2Q92692 538 aa21.56■■□□□ 1.04
DKC1-208ENST00000475423 ATP6V0A2Q9Y487 856 aa21.56■■□□□ 1.04
DKC1-208ENST00000475423 EIF6P56537 245 aaKnown RBP21.55■■□□□ 1.04
DKC1-208ENST00000475423 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
DKC1-208ENST00000475423 TCIRG1Q13488 830 aa21.55■■□□□ 1.04
DKC1-208ENST00000475423 LARGE2Q8N3Y3 721 aa21.55■■□□□ 1.04
DKC1-208ENST00000475423 MKRN1Q9UHC7 482 aaKnown RBP21.55■■□□□ 1.04
DKC1-208ENST00000475423 ADAMTS8Q9UP79 889 aa21.55■■□□□ 1.04
DKC1-208ENST00000475423 TCERG1O14776 1098 aaKnown RBP21.54■■□□□ 1.04
DKC1-208ENST00000475423 WDR43Q15061 677 aaKnown RBP eCLIP21.54■■□□□ 1.04
DKC1-208ENST00000475423 VPS33BQ9H267 617 aa21.54■■□□□ 1.04
DKC1-208ENST00000475423 CLEC11AQ9Y240 323 aa21.54■■□□□ 1.04
DKC1-208ENST00000475423 CNTNAP1P78357 1384 aa21.53■■□□□ 1.04
DKC1-208ENST00000475423 GJA3Q9Y6H8 435 aa21.53■■□□□ 1.04
DKC1-208ENST00000475423 LAMB2P55268 1798 aa21.53■■□□□ 1.04
DKC1-208ENST00000475423 ABCC4O15439 1325 aa21.53■■□□□ 1.04
DKC1-208ENST00000475423 TMEM88BA6NKF7 163 aa21.52■■□□□ 1.04
DKC1-208ENST00000475423 BBOX1O75936 387 aa21.52■■□□□ 1.04
DKC1-208ENST00000475423 HOXB7P09629 217 aa21.52■■□□□ 1.04
DKC1-208ENST00000475423 CNTROBQ8N137 903 aa21.52■■□□□ 1.04
DKC1-208ENST00000475423 TMX4Q9H1E5 349 aaPredicted RBP21.52■■□□□ 1.04
DKC1-208ENST00000475423 CHPF2Q9P2E5 772 aa21.52■■□□□ 1.04
DKC1-208ENST00000475423 LAS1LQ9Y4W2 734 aaKnown RBP21.52■■□□□ 1.04
DKC1-208ENST00000475423 LTBP1Q14766 1721 aa21.52■■□□□ 1.03
DKC1-208ENST00000475423 HCLS1P14317 486 aaPredicted RBP21.51■■□□□ 1.03
DKC1-208ENST00000475423 SCNN1DP51172 638 aa21.51■■□□□ 1.03
DKC1-208ENST00000475423 MAP1SQ66K74 1059 aaPredicted RBP21.51■■□□□ 1.03
DKC1-208ENST00000475423 RTFDC1Q9BY42 306 aaPredicted RBP21.51■■□□□ 1.03
DKC1-208ENST00000475423 TRMT112Q9UI30 125 aaKnown RBP21.51■■□□□ 1.03
DKC1-208ENST00000475423 SH3TC1Q8TE82 1336 aa21.51■■□□□ 1.03
DKC1-208ENST00000475423 PPIP5K2O43314 1243 aa21.5■■□□□ 1.03
DKC1-208ENST00000475423 SP8Q8IXZ3 490 aa21.5■■□□□ 1.03
DKC1-208ENST00000475423 NIM1KQ8IY84 436 aa21.5■■□□□ 1.03
DKC1-208ENST00000475423 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
DKC1-208ENST00000475423 LMOD1P29536 600 aaPredicted RBP21.49■■□□□ 1.03
DKC1-208ENST00000475423 AOC3Q16853 763 aa21.49■■□□□ 1.03
DKC1-208ENST00000475423 HDGFL1Q5TGJ6 251 aa21.49■■□□□ 1.03
DKC1-208ENST00000475423 PLBD2Q8NHP8 589 aa21.49■■□□□ 1.03
DKC1-208ENST00000475423 DBF4Q9UBU7 674 aaPredicted RBP21.49■■□□□ 1.03
DKC1-208ENST00000475423 EPS15P42566 896 aa21.48■■□□□ 1.03
DKC1-208ENST00000475423 ANKRD13DQ6ZTN6 518 aa21.48■■□□□ 1.03
DKC1-208ENST00000475423 TNS4Q8IZW8 715 aa21.48■■□□□ 1.03
DKC1-208ENST00000475423 SUPT20HQ8NEM7 779 aa21.48■■□□□ 1.03
DKC1-208ENST00000475423 PRKRIP1Q9H875 184 aaPredicted RBP21.48■■□□□ 1.03
DKC1-208ENST00000475423 DDX46Q7L014 1031 aaKnown RBP21.47■■□□□ 1.03
DKC1-208ENST00000475423 ISCA1Q9BUE6 129 aa21.47■■□□□ 1.03
DKC1-208ENST00000475423 ZNRF3Q9ULT6 936 aa21.47■■□□□ 1.03
DKC1-208ENST00000475423 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
DKC1-208ENST00000475423 VEGFBP49765 207 aa21.46■■□□□ 1.03
DKC1-208ENST00000475423 GRAPQ13588 217 aa21.46■■□□□ 1.03
DKC1-208ENST00000475423 DUSP27Q5VZP5 1158 aa21.46■■□□□ 1.03
DKC1-208ENST00000475423 DPP8Q6V1X1 898 aaPredicted RBP21.46■■□□□ 1.03
DKC1-208ENST00000475423 USP50Q70EL3 339 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms