RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 SUSD4Q5VX71 490 aa17.64■□□□□ 0.41
COPS7B-219ENST00000474042 GIGYF2Q6Y7W6 1299 aaKnown RBP17.64■□□□□ 0.41
COPS7B-219ENST00000474042 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
COPS7B-219ENST00000474042 BABAM1Q9NWV8 329 aa17.64■□□□□ 0.41
COPS7B-219ENST00000474042 PASKQ96RG2 1323 aa17.64■□□□□ 0.41
COPS7B-219ENST00000474042 PDIA6Q15084 440 aa17.63■□□□□ 0.41
COPS7B-219ENST00000474042 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
COPS7B-219ENST00000474042 HSPA1AP0DMV8 641 aaKnown RBP17.62■□□□□ 0.41
COPS7B-219ENST00000474042 HSPA1BP0DMV9 641 aaKnown RBP17.62■□□□□ 0.41
COPS7B-219ENST00000474042 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
COPS7B-219ENST00000474042 RIPK4P57078 832 aa17.62■□□□□ 0.41
COPS7B-219ENST00000474042 RPGRQ92834 1020 aaKnown RBP17.62■□□□□ 0.41
COPS7B-219ENST00000474042 LMOD3Q0VAK6 560 aa17.61■□□□□ 0.41
COPS7B-219ENST00000474042 PROSER3Q2NL68 480 aa17.61■□□□□ 0.41
COPS7B-219ENST00000474042 PARP10Q53GL7 1025 aa17.61■□□□□ 0.41
COPS7B-219ENST00000474042 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
COPS7B-219ENST00000474042 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
COPS7B-219ENST00000474042 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
COPS7B-219ENST00000474042 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
COPS7B-219ENST00000474042 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
COPS7B-219ENST00000474042 GPC2Q8N158 579 aa17.6■□□□□ 0.41
COPS7B-219ENST00000474042 RNF123Q5XPI4 1314 aa17.6■□□□□ 0.41
COPS7B-219ENST00000474042 CNTNAP1P78357 1384 aa17.6■□□□□ 0.41
COPS7B-219ENST00000474042 MYBBP1AQ9BQG0 1328 aaKnown RBP17.59■□□□□ 0.41
COPS7B-219ENST00000474042 PPEF1O14829 653 aaPredicted RBP17.59■□□□□ 0.41
COPS7B-219ENST00000474042 ITGBL1O95965 494 aaPredicted RBP17.59■□□□□ 0.41
COPS7B-219ENST00000474042 EPHX2P34913 555 aa17.59■□□□□ 0.41
COPS7B-219ENST00000474042 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
COPS7B-219ENST00000474042 LRRC37AA6NMS7 1700 aa17.58■□□□□ 0.41
COPS7B-219ENST00000474042 ANXA1P04083 346 aa17.58■□□□□ 0.4
COPS7B-219ENST00000474042 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
COPS7B-219ENST00000474042 RBM17Q96I25 401 aaKnown RBP17.58■□□□□ 0.4
COPS7B-219ENST00000474042 MKRN1Q9UHC7 482 aaKnown RBP17.58■□□□□ 0.4
COPS7B-219ENST00000474042 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.4
COPS7B-219ENST00000474042 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
COPS7B-219ENST00000474042 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
COPS7B-219ENST00000474042 JDP2Q8WYK2 163 aa17.57■□□□□ 0.4
COPS7B-219ENST00000474042 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
COPS7B-219ENST00000474042 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
COPS7B-219ENST00000474042 THSD7BQ9C0I4 1608 aa17.55■□□□□ 0.4
COPS7B-219ENST00000474042 ABCC4O15439 1325 aa17.55■□□□□ 0.4
COPS7B-219ENST00000474042 EIF6P56537 245 aaKnown RBP17.55■□□□□ 0.4
COPS7B-219ENST00000474042 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
COPS7B-219ENST00000474042 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 CHL1O00533 1208 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 SCNN1DP51172 638 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 COPS6Q7L5N1 327 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 NLRP10Q86W26 655 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 CCDC146Q8IYE0 955 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 TNS4Q8IZW8 715 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 LARGE2Q8N3Y3 721 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 XAGE3Q8WTP9 111 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 TAF1P21675 1872 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 TRPM7Q96QT4 1865 aa17.54■□□□□ 0.4
COPS7B-219ENST00000474042 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
COPS7B-219ENST00000474042 DDX21Q9NR30 783 aaKnown RBP eCLIP17.53■□□□□ 0.4
COPS7B-219ENST00000474042 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
COPS7B-219ENST00000474042 MAP1SQ66K74 1059 aaPredicted RBP17.52■□□□□ 0.4
COPS7B-219ENST00000474042 NIM1KQ8IY84 436 aa17.52■□□□□ 0.4
COPS7B-219ENST00000474042 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
COPS7B-219ENST00000474042 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
COPS7B-219ENST00000474042 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
COPS7B-219ENST00000474042 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
COPS7B-219ENST00000474042 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
COPS7B-219ENST00000474042 GJA3Q9Y6H8 435 aa17.52■□□□□ 0.4
COPS7B-219ENST00000474042 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
COPS7B-219ENST00000474042 PPIP5K2O43314 1243 aa17.51■□□□□ 0.39
COPS7B-219ENST00000474042 HOXB7P09629 217 aa17.51■□□□□ 0.39
COPS7B-219ENST00000474042 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
COPS7B-219ENST00000474042 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
COPS7B-219ENST00000474042 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
COPS7B-219ENST00000474042 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
COPS7B-219ENST00000474042 VEGFBP49765 207 aa17.5■□□□□ 0.39
COPS7B-219ENST00000474042 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
COPS7B-219ENST00000474042 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
COPS7B-219ENST00000474042 AOC3Q16853 763 aa17.5■□□□□ 0.39
COPS7B-219ENST00000474042 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
COPS7B-219ENST00000474042 SH3TC1Q8TE82 1336 aa17.49■□□□□ 0.39
COPS7B-219ENST00000474042 HCLS1P14317 486 aaPredicted RBP17.49■□□□□ 0.39
COPS7B-219ENST00000474042 EPS15P42566 896 aa17.49■□□□□ 0.39
COPS7B-219ENST00000474042 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
COPS7B-219ENST00000474042 COL4A1P02462 1669 aa17.48■□□□□ 0.39
COPS7B-219ENST00000474042 FOXN1O15353 648 aa17.48■□□□□ 0.39
COPS7B-219ENST00000474042 BBOX1O75936 387 aa17.48■□□□□ 0.39
COPS7B-219ENST00000474042 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
COPS7B-219ENST00000474042 USP50Q70EL3 339 aaPredicted RBP17.48■□□□□ 0.39
COPS7B-219ENST00000474042 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
COPS7B-219ENST00000474042 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
COPS7B-219ENST00000474042 TMX4Q9H1E5 349 aaPredicted RBP17.48■□□□□ 0.39
COPS7B-219ENST00000474042 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
COPS7B-219ENST00000474042 GRAPQ13588 217 aa17.47■□□□□ 0.39
COPS7B-219ENST00000474042 PLBD2Q8NHP8 589 aa17.47■□□□□ 0.39
COPS7B-219ENST00000474042 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
COPS7B-219ENST00000474042 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
COPS7B-219ENST00000474042 ADAMTS8Q9UP79 889 aa17.47■□□□□ 0.39
COPS7B-219ENST00000474042 KIAA2012Q0VF49 1180 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms