RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 GGA1Q9UJY5 639 aa6.87□□□□□ -1.31
BRCA1-212ENST00000473961 C2CD2LO14523 706 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 NDUFB5O43674 189 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 EPXP11678 715 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 SCNN1AP37088 669 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 SCNN1DP51172 638 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 ALKBH2Q6NS38 261 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 STAG2Q8N3U4 1231 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 MRRFQ96E11 262 aaKnown RBP6.86□□□□□ -1.31
BRCA1-212ENST00000473961 SLC4A9Q96Q91 983 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 SEPT3Q9UH03 358 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 SERTAD1Q9UHV2 236 aa6.86□□□□□ -1.31
BRCA1-212ENST00000473961 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-212ENST00000473961 F11P03951 625 aa6.85□□□□□ -1.31
BRCA1-212ENST00000473961 ZNF16P17020 682 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-212ENST00000473961 PSMA6P60900 246 aaKnown RBP6.85□□□□□ -1.31
BRCA1-212ENST00000473961 UBAP2LQ14157 1087 aaKnown RBP6.85□□□□□ -1.31
BRCA1-212ENST00000473961 MCTP1Q6DN14 999 aa6.85□□□□□ -1.31
BRCA1-212ENST00000473961 TNS4Q8IZW8 715 aa6.85□□□□□ -1.31
BRCA1-212ENST00000473961 CHMP7Q8WUX9 453 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-212ENST00000473961 CITED4Q96RK1 184 aa6.85□□□□□ -1.31
BRCA1-212ENST00000473961 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
BRCA1-212ENST00000473961 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
BRCA1-212ENST00000473961 A6NJY4 79 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 MEN1O00255 615 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-212ENST00000473961 LGR5O75473 907 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 GTF2E1P29083 439 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-212ENST00000473961 NAA30Q147X3 362 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-212ENST00000473961 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 RGL4Q8IZJ4 473 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 ABTB2Q8N961 1025 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 TRIM11Q96F44 468 aa6.84□□□□□ -1.31
BRCA1-212ENST00000473961 TSPAN10Q9H1Z9 355 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-212ENST00000473961 SPATA31C2B4DYI2 1134 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 BMP4P12644 408 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 NPR3P17342 541 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 SMTNP53814 917 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 EPHA4P54764 986 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 ARHGAP4P98171 946 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 AAMPQ13685 434 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 MTFR1Q15390 333 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 TIMMDC1Q9NPL8 285 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 SCHIP1Q9P0W5 487 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-212ENST00000473961 BRPF3Q9ULD4 1205 aa6.83□□□□□ -1.32
BRCA1-212ENST00000473961 TLR1Q15399 786 aa6.82□□□□□ -1.32
BRCA1-212ENST00000473961 EAPPQ56P03 285 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-212ENST00000473961 WDR44Q5JSH3 913 aa6.82□□□□□ -1.32
BRCA1-212ENST00000473961 SLC9A9Q8IVB4 645 aa6.82□□□□□ -1.32
BRCA1-212ENST00000473961 GRIP2Q9C0E4 1043 aa6.82□□□□□ -1.32
BRCA1-212ENST00000473961 A0A1W2PRU2 124 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 UNCXA6NJT0 531 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 CDK2AP1O14519 115 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
BRCA1-212ENST00000473961 PDE3BQ13370 1112 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 MTMR3Q13615 1198 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 SLC27A3Q5K4L6 730 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 CHSY3Q70JA7 882 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 TMC1Q8TDI8 760 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 C2orf49Q9BVC5 232 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-212ENST00000473961 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 ARHGEF10LQ9HCE6 1279 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 STIM2Q9P246 746 aa6.81□□□□□ -1.32
BRCA1-212ENST00000473961 VAMP1P23763 118 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 NOM1Q5C9Z4 860 aaKnown RBP6.8□□□□□ -1.32
BRCA1-212ENST00000473961 CNKSR1Q969H4 720 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 XAGE2Q96GT9 111 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 DMRTB1Q96MA1 342 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 NLRP3Q96P20 1036 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 ESYT1Q9BSJ8 1104 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 GPAMQ9HCL2 828 aa6.8□□□□□ -1.32
BRCA1-212ENST00000473961 ARID1BQ8NFD5 2236 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-212ENST00000473961 SERTM1A2A2V5 107 aa6.79□□□□□ -1.32
BRCA1-212ENST00000473961 MPSTP25325 297 aa6.79□□□□□ -1.32
BRCA1-212ENST00000473961 BRD2P25440 801 aaKnown RBP6.79□□□□□ -1.32
BRCA1-212ENST00000473961 CTBSQ01459 385 aa6.79□□□□□ -1.32
BRCA1-212ENST00000473961 MYO19Q96H55 970 aa6.79□□□□□ -1.32
BRCA1-212ENST00000473961 PLVAPQ9BX97 442 aa6.79□□□□□ -1.32
BRCA1-212ENST00000473961 RAB6BQ9NRW1 208 aa6.79□□□□□ -1.32
BRCA1-212ENST00000473961 ATXN7L1Q9ULK2 861 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-212ENST00000473961 NEURL1BA8MQ27 555 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 ARAFP10398 606 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 USP5P45974 858 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 HIRAP54198 1017 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-212ENST00000473961 CLN3Q13286 438 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 HIF1AQ16665 826 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 CAPN12Q6ZSI9 719 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 ZNF232Q9UNY5 417 aa6.78□□□□□ -1.32
BRCA1-212ENST00000473961 STAU1O95793 577 aaKnown RBP6.77□□□□□ -1.33
BRCA1-212ENST00000473961 TCF3P15923 654 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 PCSK2P16519 638 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 FGFR3P22607 806 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 EIF1AXP47813 144 aaKnown RBP6.77□□□□□ -1.33
BRCA1-212ENST00000473961 ATP2B2Q01814 1243 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 ECM1Q16610 540 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 FBXO33Q7Z6M2 555 aa6.77□□□□□ -1.33
BRCA1-212ENST00000473961 TTC16Q8NEE8 873 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms