RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 XAGE3Q8WTP9 111 aa15.61■□□□□ 0.09
SMPD4-217ENST00000473720 BABAM1Q9NWV8 329 aa15.61■□□□□ 0.09
SMPD4-217ENST00000473720 TRIM35Q9UPQ4 493 aa15.61■□□□□ 0.09
SMPD4-217ENST00000473720 DDX60Q8IY21 1712 aaKnown RBP15.6■□□□□ 0.09
SMPD4-217ENST00000473720 NTSR2O95665 410 aa15.6■□□□□ 0.09
SMPD4-217ENST00000473720 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
SMPD4-217ENST00000473720 POTEJP0CG39 1038 aa15.6■□□□□ 0.09
SMPD4-217ENST00000473720 PRKRIP1Q9H875 184 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-217ENST00000473720 IARSP41252 1262 aaKnown RBP15.59■□□□□ 0.09
SMPD4-217ENST00000473720 CRY2Q49AN0 593 aa15.59■□□□□ 0.09
SMPD4-217ENST00000473720 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
SMPD4-217ENST00000473720 LRP10Q7Z4F1 713 aa15.59■□□□□ 0.09
SMPD4-217ENST00000473720 SLC51AQ86UW1 340 aa15.59■□□□□ 0.09
SMPD4-217ENST00000473720 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
SMPD4-217ENST00000473720 RBM17Q96I25 401 aaKnown RBP15.59■□□□□ 0.09
SMPD4-217ENST00000473720 UTP14AQ9BVJ6 771 aaKnown RBP15.59■□□□□ 0.09
SMPD4-217ENST00000473720 ZNF541Q9H0D2 1346 aa15.59■□□□□ 0.09
SMPD4-217ENST00000473720 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-217ENST00000473720 CHL1O00533 1208 aa15.58■□□□□ 0.08
SMPD4-217ENST00000473720 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-217ENST00000473720 PARP10Q53GL7 1025 aa15.58■□□□□ 0.08
SMPD4-217ENST00000473720 HDGFL1Q5TGJ6 251 aa15.58■□□□□ 0.08
SMPD4-217ENST00000473720 NLRP3Q96P20 1036 aa15.58■□□□□ 0.08
SMPD4-217ENST00000473720 CHPF2Q9P2E5 772 aa15.58■□□□□ 0.08
SMPD4-217ENST00000473720 EAPPQ56P03 285 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-217ENST00000473720 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMPD4-217ENST00000473720 RIC1Q4ADV7 1423 aa15.57■□□□□ 0.08
SMPD4-217ENST00000473720 IQCA1LA6NCM1 817 aa15.56■□□□□ 0.08
SMPD4-217ENST00000473720 APAF1O14727 1248 aa15.56■□□□□ 0.08
SMPD4-217ENST00000473720 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
SMPD4-217ENST00000473720 CHADLQ6NUI6 762 aa15.56■□□□□ 0.08
SMPD4-217ENST00000473720 COL4A5P29400 1685 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 RNF123Q5XPI4 1314 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 HSP90AB3PQ58FF7 597 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 JDP2Q8WYK2 163 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 CRAMP1Q96RY5 1269 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 TMX4Q9H1E5 349 aaPredicted RBP15.55■□□□□ 0.08
SMPD4-217ENST00000473720 TRMT112Q9UI30 125 aaKnown RBP15.55■□□□□ 0.08
SMPD4-217ENST00000473720 CLEC11AQ9Y240 323 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 GJA3Q9Y6H8 435 aa15.55■□□□□ 0.08
SMPD4-217ENST00000473720 ELL2O00472 640 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-217ENST00000473720 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-217ENST00000473720 TCIRG1Q13488 830 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 DUSP27Q5VZP5 1158 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 NLRP10Q86W26 655 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 LARGE2Q8N3Y3 721 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 PSMD1Q99460 953 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 TAF1DQ9H5J8 278 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-217ENST00000473720 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 TRPM7Q96QT4 1865 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 SPEF2Q9C093 1822 aa15.54■□□□□ 0.08
SMPD4-217ENST00000473720 SNED1Q8TER0 1413 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 ABCC4O15439 1325 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 FZD9O00144 591 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 EIF6P56537 245 aaKnown RBP15.53■□□□□ 0.08
SMPD4-217ENST00000473720 RTL5Q5HYW3 569 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-217ENST00000473720 CC2D2BQ6DHV5 1058 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 LTBP1Q14766 1721 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 MYH3P11055 1940 aa15.53■□□□□ 0.08
SMPD4-217ENST00000473720 ADAMTSL1Q8N6G6 1762 aa15.52■□□□□ 0.08
SMPD4-217ENST00000473720 ATP5J2-PTCD1G3V325 749 aa15.52■□□□□ 0.08
SMPD4-217ENST00000473720 IFFO2Q5TF58 517 aa15.52■□□□□ 0.08
SMPD4-217ENST00000473720 L3MBTL3Q96JM7 780 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-217ENST00000473720 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-217ENST00000473720 SH3TC1Q8TE82 1336 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 PPIP5K2O43314 1243 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 EPHX2P34913 555 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 AOC3Q16853 763 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 ANKRD13DQ6ZTN6 518 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 LDHDQ86WU2 507 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 PLBD2Q8NHP8 589 aa15.51■□□□□ 0.07
SMPD4-217ENST00000473720 POLR2AP24928 1970 aaKnown RBP15.51■□□□□ 0.07
SMPD4-217ENST00000473720 HOXB7P09629 217 aa15.5■□□□□ 0.07
SMPD4-217ENST00000473720 DDX46Q7L014 1031 aaKnown RBP15.5■□□□□ 0.07
SMPD4-217ENST00000473720 NIM1KQ8IY84 436 aa15.5■□□□□ 0.07
SMPD4-217ENST00000473720 GPC2Q8N158 579 aa15.5■□□□□ 0.07
SMPD4-217ENST00000473720 JMYQ8N9B5 988 aa15.5■□□□□ 0.07
SMPD4-217ENST00000473720 MKRN1Q9UHC7 482 aaKnown RBP15.5■□□□□ 0.07
SMPD4-217ENST00000473720 ATP6V0A2Q9Y487 856 aa15.5■□□□□ 0.07
SMPD4-217ENST00000473720 LRRC37AA6NMS7 1700 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-217ENST00000473720 GNAI1P63096 354 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 CCDC184Q52MB2 194 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 FAM89AQ96GI7 184 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 CACNA1FO60840 1977 aa15.49■□□□□ 0.07
SMPD4-217ENST00000473720 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
SMPD4-217ENST00000473720 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-217ENST00000473720 DPP8Q6V1X1 898 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-217ENST00000473720 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
SMPD4-217ENST00000473720 IFT57Q9NWB7 429 aa15.48■□□□□ 0.07
SMPD4-217ENST00000473720 ZNF853P0CG23 659 aa15.47■□□□□ 0.07
SMPD4-217ENST00000473720 MPNDQ8N594 471 aa15.47■□□□□ 0.07
SMPD4-217ENST00000473720 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
SMPD4-217ENST00000473720 COL4A1P02462 1669 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms