RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 GYS1P13807 737 aa10.82□□□□□ -0.68
LSAMP-202ENST00000473171 KCNA3P22001 575 aa10.82□□□□□ -0.68
LSAMP-202ENST00000473171 NLGN1Q8N2Q7 840 aa10.82□□□□□ -0.68
LSAMP-202ENST00000473171 FAM198AQ9UFP1 575 aa10.82□□□□□ -0.68
LSAMP-202ENST00000473171 PARP3Q9Y6F1 533 aa10.82□□□□□ -0.68
LSAMP-202ENST00000473171 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
LSAMP-202ENST00000473171 HSPA1AP0DMV8 641 aaKnown RBP10.81□□□□□ -0.68
LSAMP-202ENST00000473171 HSPA1BP0DMV9 641 aaKnown RBP10.81□□□□□ -0.68
LSAMP-202ENST00000473171 BCAMP50895 628 aa10.81□□□□□ -0.68
LSAMP-202ENST00000473171 PTGDRQ13258 359 aa10.81□□□□□ -0.68
LSAMP-202ENST00000473171 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
LSAMP-202ENST00000473171 LRCH3Q96II8 777 aa10.81□□□□□ -0.68
LSAMP-202ENST00000473171 SLC4A9Q96Q91 983 aa10.81□□□□□ -0.68
LSAMP-202ENST00000473171 KIAA1551Q9HCM1 1747 aa10.81□□□□□ -0.68
LSAMP-202ENST00000473171 KDRP35968 1356 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 PHKG2P15735 406 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 CHRNA5P30532 468 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 RFC4P35249 363 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 DALRD3Q5D0E6 543 aaKnown RBP10.8□□□□□ -0.68
LSAMP-202ENST00000473171 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
LSAMP-202ENST00000473171 SMC1BQ8NDV3 1235 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 PIM2Q9P1W9 311 aa10.8□□□□□ -0.68
LSAMP-202ENST00000473171 N4BP2Q86UW6 1770 aaPredicted RBP10.8□□□□□ -0.68
LSAMP-202ENST00000473171 RASSF7Q02833 373 aa10.79□□□□□ -0.68
LSAMP-202ENST00000473171 IFNL2Q8IZJ0 200 aa10.79□□□□□ -0.68
LSAMP-202ENST00000473171 EYA1Q99502 592 aa10.79□□□□□ -0.68
LSAMP-202ENST00000473171 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
LSAMP-202ENST00000473171 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
LSAMP-202ENST00000473171 MAP2P11137 1827 aaKnown RBP10.78□□□□□ -0.68
LSAMP-202ENST00000473171 PKD1L3Q7Z443 1732 aa10.78□□□□□ -0.68
LSAMP-202ENST00000473171 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.68
LSAMP-202ENST00000473171 TONSLQ96HA7 1378 aa10.77□□□□□ -0.68
LSAMP-202ENST00000473171 NCAPD2Q15021 1401 aa10.77□□□□□ -0.68
LSAMP-202ENST00000473171 RPS6KA4O75676 772 aa10.77□□□□□ -0.69
LSAMP-202ENST00000473171 DDR1Q08345 913 aa10.77□□□□□ -0.69
LSAMP-202ENST00000473171 C4AP0C0L4 1744 aa10.77□□□□□ -0.69
LSAMP-202ENST00000473171 CNTNAP4Q9C0A0 1308 aa10.77□□□□□ -0.69
LSAMP-202ENST00000473171 ITGB4P16144 1822 aa10.77□□□□□ -0.69
LSAMP-202ENST00000473171 RC3H1Q5TC82 1133 aaKnown RBP10.76□□□□□ -0.69
LSAMP-202ENST00000473171 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
LSAMP-202ENST00000473171 PLA2G2EQ9NZK7 142 aa10.76□□□□□ -0.69
LSAMP-202ENST00000473171 KIF13BQ9NQT8 1826 aa10.75□□□□□ -0.69
LSAMP-202ENST00000473171 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
LSAMP-202ENST00000473171 PTCD1O75127 700 aaKnown RBP10.75□□□□□ -0.69
LSAMP-202ENST00000473171 CRKLP46109 303 aaKnown RBP10.75□□□□□ -0.69
LSAMP-202ENST00000473171 SAMD7Q7Z3H4 446 aa10.75□□□□□ -0.69
LSAMP-202ENST00000473171 PCNTO95613 3336 aa10.74□□□□□ -0.69
LSAMP-202ENST00000473171 RNF40O75150 1001 aa10.74□□□□□ -0.69
LSAMP-202ENST00000473171 CARD14Q9BXL6 1004 aa10.74□□□□□ -0.69
LSAMP-202ENST00000473171 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
LSAMP-202ENST00000473171 USP42Q9H9J4 1324 aaKnown RBP10.74□□□□□ -0.69
LSAMP-202ENST00000473171 POLRMTO00411 1230 aaKnown RBP10.73□□□□□ -0.69
LSAMP-202ENST00000473171 VEGFAP15692 232 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-202ENST00000473171 CABP4P57796 275 aa10.73□□□□□ -0.69
LSAMP-202ENST00000473171 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
LSAMP-202ENST00000473171 WASHC2AQ641Q2 1341 aa10.73□□□□□ -0.69
LSAMP-202ENST00000473171 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 ERVV-2B6SEH9 535 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 LMNB1P20700 586 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 TNNT2P45379 298 aaPredicted RBP10.72□□□□□ -0.69
LSAMP-202ENST00000473171 PPP4CP60510 307 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 EIF4A2Q14240 407 aaKnown RBP10.72□□□□□ -0.69
LSAMP-202ENST00000473171 HIC1Q14526 733 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 WBP1LQ9NX94 342 aa10.72□□□□□ -0.69
LSAMP-202ENST00000473171 MKRN1Q9UHC7 482 aaKnown RBP10.72□□□□□ -0.69
LSAMP-202ENST00000473171 KDM6AO15550 1401 aaPredicted RBP10.72□□□□□ -0.69
LSAMP-202ENST00000473171 SLC24A1O60721 1099 aa10.71□□□□□ -0.69
LSAMP-202ENST00000473171 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
LSAMP-202ENST00000473171 ZNF530Q6P9A1 599 aaPredicted RBP10.71□□□□□ -0.69
LSAMP-202ENST00000473171 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
LSAMP-202ENST00000473171 POLKQ9UBT6 870 aa10.71□□□□□ -0.69
LSAMP-202ENST00000473171 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
LSAMP-202ENST00000473171 USPL1Q5W0Q7 1092 aa10.7□□□□□ -0.7
LSAMP-202ENST00000473171 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
LSAMP-202ENST00000473171 FOXN1O15353 648 aa10.69□□□□□ -0.7
LSAMP-202ENST00000473171 ZPR1O75312 459 aa10.69□□□□□ -0.7
LSAMP-202ENST00000473171 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
LSAMP-202ENST00000473171 TM4SF1P30408 202 aa10.69□□□□□ -0.7
LSAMP-202ENST00000473171 INTS5Q6P9B9 1019 aaKnown RBP10.69□□□□□ -0.7
LSAMP-202ENST00000473171 BRCA1P38398 1863 aaKnown RBP10.69□□□□□ -0.7
LSAMP-202ENST00000473171 KIF20BQ96Q89 1820 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 POTECB2RU33 542 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 NFKBIEO00221 500 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 MTHFSP49914 203 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 NFIXQ14938 502 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 FAM161AQ3B820 660 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 PLEKHO1Q53GL0 409 aaPredicted RBP10.68□□□□□ -0.7
LSAMP-202ENST00000473171 NFATC2IPQ8NCF5 419 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
LSAMP-202ENST00000473171 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
LSAMP-202ENST00000473171 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
LSAMP-202ENST00000473171 C2CD5Q86YS7 1000 aa10.67□□□□□ -0.7
LSAMP-202ENST00000473171 AEBP1Q8IUX7 1158 aa10.67□□□□□ -0.7
LSAMP-202ENST00000473171 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
LSAMP-202ENST00000473171 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
LSAMP-202ENST00000473171 ARFGEF1Q9Y6D6 1849 aa10.67□□□□□ -0.7
LSAMP-202ENST00000473171 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms