RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 RTKN2Q8IZC4 609 aa12.92□□□□□ -0.34
NUDCD3-205ENST00000472246 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
NUDCD3-205ENST00000472246 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
NUDCD3-205ENST00000472246 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-205ENST00000472246 ANKRD36CQ5JPF3 1778 aa12.92□□□□□ -0.34
NUDCD3-205ENST00000472246 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
NUDCD3-205ENST00000472246 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
NUDCD3-205ENST00000472246 KRT24Q2M2I5 525 aa12.91□□□□□ -0.34
NUDCD3-205ENST00000472246 TAF1DQ9H5J8 278 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-205ENST00000472246 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
NUDCD3-205ENST00000472246 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
NUDCD3-205ENST00000472246 TCERG1O14776 1098 aaKnown RBP12.9□□□□□ -0.34
NUDCD3-205ENST00000472246 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
NUDCD3-205ENST00000472246 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
NUDCD3-205ENST00000472246 PSMD1Q99460 953 aa12.9□□□□□ -0.34
NUDCD3-205ENST00000472246 LAMB2P55268 1798 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 FZD9O00144 591 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 PARP10Q53GL7 1025 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 EAPPQ56P03 285 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 COL13A1Q5TAT6 717 aaPredicted RBP12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 PPP1R42Q7Z4L9 355 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 HACL1Q9UJ83 578 aa12.89□□□□□ -0.35
NUDCD3-205ENST00000472246 HSPA1AP0DMV8 641 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 HSPA1BP0DMV9 641 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 AIMP1Q12904 312 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 CC2D2BQ6DHV5 1058 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 XAGE3Q8WTP9 111 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 RBM17Q96I25 401 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 CRAMP1Q96RY5 1269 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 UTP14AQ9BVJ6 771 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 MKRN1Q9UHC7 482 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 LTBP1Q14766 1721 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 PASKQ96RG2 1323 aa12.88□□□□□ -0.35
NUDCD3-205ENST00000472246 EPHX2P34913 555 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 WDR43Q15061 677 aaKnown RBP eCLIP12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 JDP2Q8WYK2 163 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 ZNF428Q96B54 188 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 RUNDC1Q96C34 613 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 ABCC4O15439 1325 aa12.87□□□□□ -0.35
NUDCD3-205ENST00000472246 CHL1O00533 1208 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 NLRP10Q86W26 655 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 GPC2Q8N158 579 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
NUDCD3-205ENST00000472246 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 EIF6P56537 245 aaKnown RBP12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 SLC10A5Q5PT55 438 aa12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 MAP1SQ66K74 1059 aaPredicted RBP12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
NUDCD3-205ENST00000472246 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
NUDCD3-205ENST00000472246 TRMT112Q9UI30 125 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-205ENST00000472246 DDX60Q8IY21 1712 aaKnown RBP12.84□□□□□ -0.35
NUDCD3-205ENST00000472246 TAF1P21675 1872 aa12.84□□□□□ -0.35
NUDCD3-205ENST00000472246 CNTNAP1P78357 1384 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 SCNN1DP51172 638 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 AOC3Q16853 763 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 NIM1KQ8IY84 436 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 ATP6V0A2Q9Y487 856 aa12.83□□□□□ -0.36
NUDCD3-205ENST00000472246 TMEM88BA6NKF7 163 aa12.82□□□□□ -0.36
NUDCD3-205ENST00000472246 CNTROBQ8N137 903 aa12.82□□□□□ -0.36
NUDCD3-205ENST00000472246 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
NUDCD3-205ENST00000472246 SH3TC1Q8TE82 1336 aa12.82□□□□□ -0.36
NUDCD3-205ENST00000472246 COL4A1P02462 1669 aa12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 EPS15P42566 896 aa12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 MBIPQ9NS73 344 aa12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
NUDCD3-205ENST00000472246 LRRC37AA6NMS7 1700 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 ATP5J2-PTCD1G3V325 749 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 CAPN15O75808 1086 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 HOXB7P09629 217 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 VEGFBP49765 207 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 FMR1Q06787 632 aaKnown RBP eCLIP12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 DUSP27Q5VZP5 1158 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 ANKRD13DQ6ZTN6 518 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 PLBD2Q8NHP8 589 aa12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 DBF4Q9UBU7 674 aaPredicted RBP12.8□□□□□ -0.36
NUDCD3-205ENST00000472246 APAF1O14727 1248 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms