RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 NUP98P52948 1817 aa12.5□□□□□ -0.41
LINC01140-204ENST00000471417 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
LINC01140-204ENST00000471417 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
LINC01140-204ENST00000471417 LDHDQ86WU2 507 aa12.49□□□□□ -0.41
LINC01140-204ENST00000471417 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
LINC01140-204ENST00000471417 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
LINC01140-204ENST00000471417 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
LINC01140-204ENST00000471417 COL4A5P29400 1685 aa12.48□□□□□ -0.41
LINC01140-204ENST00000471417 PASKQ96RG2 1323 aa12.48□□□□□ -0.41
LINC01140-204ENST00000471417 ITGBL1O95965 494 aaPredicted RBP12.48□□□□□ -0.41
LINC01140-204ENST00000471417 EPHX2P34913 555 aa12.48□□□□□ -0.41
LINC01140-204ENST00000471417 TMPOP42166 694 aaKnown RBP12.48□□□□□ -0.41
LINC01140-204ENST00000471417 NECTIN2Q92692 538 aa12.48□□□□□ -0.41
LINC01140-204ENST00000471417 PSMD1Q99460 953 aa12.48□□□□□ -0.41
LINC01140-204ENST00000471417 IBTKQ9P2D0 1353 aaPredicted RBP12.47□□□□□ -0.41
LINC01140-204ENST00000471417 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
LINC01140-204ENST00000471417 KRT24Q2M2I5 525 aa12.47□□□□□ -0.41
LINC01140-204ENST00000471417 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
LINC01140-204ENST00000471417 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
LINC01140-204ENST00000471417 RIC1Q4ADV7 1423 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 SCN4AP35499 1836 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 PPEF1O14829 653 aaPredicted RBP12.46□□□□□ -0.41
LINC01140-204ENST00000471417 CAPN15O75808 1086 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
LINC01140-204ENST00000471417 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
LINC01140-204ENST00000471417 RALBP1Q15311 655 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 NEUROD2Q15784 382 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 MAP1SQ66K74 1059 aaPredicted RBP12.46□□□□□ -0.41
LINC01140-204ENST00000471417 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 TNS4Q8IZW8 715 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 GPC2Q8N158 579 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 JDP2Q8WYK2 163 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 ZNF428Q96B54 188 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
LINC01140-204ENST00000471417 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 GJA3Q9Y6H8 435 aa12.46□□□□□ -0.41
LINC01140-204ENST00000471417 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
LINC01140-204ENST00000471417 COPS6Q7L5N1 327 aa12.45□□□□□ -0.42
LINC01140-204ENST00000471417 PPP1R42Q7Z4L9 355 aa12.45□□□□□ -0.42
LINC01140-204ENST00000471417 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
LINC01140-204ENST00000471417 XAGE3Q8WTP9 111 aa12.45□□□□□ -0.42
LINC01140-204ENST00000471417 NLRP3Q96P20 1036 aa12.45□□□□□ -0.42
LINC01140-204ENST00000471417 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
LINC01140-204ENST00000471417 CNTNAP1P78357 1384 aa12.44□□□□□ -0.42
LINC01140-204ENST00000471417 TMEM88BA6NKF7 163 aa12.44□□□□□ -0.42
LINC01140-204ENST00000471417 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
LINC01140-204ENST00000471417 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
LINC01140-204ENST00000471417 FMR1Q06787 632 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC01140-204ENST00000471417 SLC10A5Q5PT55 438 aa12.44□□□□□ -0.42
LINC01140-204ENST00000471417 CNTROBQ8N137 903 aa12.44□□□□□ -0.42
LINC01140-204ENST00000471417 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
LINC01140-204ENST00000471417 TRIM35Q9UPQ4 493 aa12.44□□□□□ -0.42
LINC01140-204ENST00000471417 ADAMTSL1Q8N6G6 1762 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 CHL1O00533 1208 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 EPS15P42566 896 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 VEGFBP49765 207 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 SCNN1DP51172 638 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 PNMA8AQ86V59 439 aaPredicted RBP12.43□□□□□ -0.42
LINC01140-204ENST00000471417 NLRP10Q86W26 655 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 ATP6V0A2Q9Y487 856 aa12.43□□□□□ -0.42
LINC01140-204ENST00000471417 LAS1LQ9Y4W2 734 aaKnown RBP12.43□□□□□ -0.42
LINC01140-204ENST00000471417 LTBP1Q14766 1721 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 ABCC4O15439 1325 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
LINC01140-204ENST00000471417 FOXN1O15353 648 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 PPIP5K2O43314 1243 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 TCIRG1Q13488 830 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 AOC3Q16853 763 aa12.42□□□□□ -0.42
LINC01140-204ENST00000471417 DDX21Q9NR30 783 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC01140-204ENST00000471417 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
LINC01140-204ENST00000471417 NIM1KQ8IY84 436 aa12.41□□□□□ -0.42
LINC01140-204ENST00000471417 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
LINC01140-204ENST00000471417 ADAMTS8Q9UP79 889 aa12.41□□□□□ -0.42
LINC01140-204ENST00000471417 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
LINC01140-204ENST00000471417 HSP90AB3PQ58FF7 597 aa12.4□□□□□ -0.42
LINC01140-204ENST00000471417 RUNDC1Q96C34 613 aa12.4□□□□□ -0.42
LINC01140-204ENST00000471417 TRMT112Q9UI30 125 aaKnown RBP12.4□□□□□ -0.42
LINC01140-204ENST00000471417 RASSF10A6NK89 507 aa12.39□□□□□ -0.43
LINC01140-204ENST00000471417 TRAF5O00463 557 aa12.39□□□□□ -0.43
LINC01140-204ENST00000471417 BBOX1O75936 387 aa12.39□□□□□ -0.43
LINC01140-204ENST00000471417 CXCL9Q07325 125 aa12.39□□□□□ -0.43
LINC01140-204ENST00000471417 SP8Q8IXZ3 490 aa12.39□□□□□ -0.43
LINC01140-204ENST00000471417 RTFDC1Q9BY42 306 aaPredicted RBP12.39□□□□□ -0.43
LINC01140-204ENST00000471417 SH3TC1Q8TE82 1336 aa12.38□□□□□ -0.43
LINC01140-204ENST00000471417 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
LINC01140-204ENST00000471417 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC01140-204ENST00000471417 DEFB115Q30KQ5 88 aa12.38□□□□□ -0.43
LINC01140-204ENST00000471417 HDGFL1Q5TGJ6 251 aa12.38□□□□□ -0.43
LINC01140-204ENST00000471417 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
LINC01140-204ENST00000471417 MPNDQ8N594 471 aa12.38□□□□□ -0.43
LINC01140-204ENST00000471417 TMX4Q9H1E5 349 aaPredicted RBP12.38□□□□□ -0.43
LINC01140-204ENST00000471417 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
LINC01140-204ENST00000471417 GRAPQ13588 217 aa12.37□□□□□ -0.43
LINC01140-204ENST00000471417 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
LINC01140-204ENST00000471417 CST9Q5W186 159 aa12.37□□□□□ -0.43
LINC01140-204ENST00000471417 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
LINC01140-204ENST00000471417 USP50Q70EL3 339 aaPredicted RBP12.37□□□□□ -0.43
LINC01140-204ENST00000471417 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
LINC01140-204ENST00000471417 PLBD2Q8NHP8 589 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms