RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 UTRNP46939 3433 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 KIF1AQ12756 1690 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 KCNQ2O43526 872 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 BMP2P12643 396 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 LRRN4Q8WUT4 740 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 SPON1Q9HCB6 807 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 KIF1BO60333 1816 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 SPATA31A5Q5VU36 1347 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 SPATA31A7Q8IWB4 1347 aa13.64□□□□□ -0.23
CKAP2-205ENST00000468284 MAN1A2O60476 641 aa13.63□□□□□ -0.23
CKAP2-205ENST00000468284 CCDC116Q8IYX3 515 aa13.63□□□□□ -0.23
CKAP2-205ENST00000468284 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
CKAP2-205ENST00000468284 ROCK1Q13464 1354 aa13.62□□□□□ -0.23
CKAP2-205ENST00000468284 NINLQ9Y2I6 1382 aa13.62□□□□□ -0.23
CKAP2-205ENST00000468284 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
CKAP2-205ENST00000468284 FAM117AQ9C073 453 aa13.62□□□□□ -0.23
CKAP2-205ENST00000468284 FKBPLQ9UIM3 349 aa13.62□□□□□ -0.23
CKAP2-205ENST00000468284 EMILIN1Q9Y6C2 1016 aa13.62□□□□□ -0.23
CKAP2-205ENST00000468284 ADGRB2O60241 1585 aa13.62□□□□□ -0.23
CKAP2-205ENST00000468284 ITGAEP38570 1179 aa13.61□□□□□ -0.23
CKAP2-205ENST00000468284 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
CKAP2-205ENST00000468284 ARHGAP9Q9BRR9 750 aa13.61□□□□□ -0.23
CKAP2-205ENST00000468284 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
CKAP2-205ENST00000468284 PSME1Q06323 249 aa13.6□□□□□ -0.23
CKAP2-205ENST00000468284 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
CKAP2-205ENST00000468284 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
CKAP2-205ENST00000468284 SBNO1A3KN83 1393 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 PPLO60437 1756 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 NR6A1Q15406 480 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 PPP2R2DQ66LE6 453 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 FAM196AQ6ZSG2 479 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
CKAP2-205ENST00000468284 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.23
CKAP2-205ENST00000468284 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.23
CKAP2-205ENST00000468284 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
CKAP2-205ENST00000468284 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.24
CKAP2-205ENST00000468284 TECPR2O15040 1411 aa13.57□□□□□ -0.24
CKAP2-205ENST00000468284 NRXN1Q9ULB1 1477 aa13.57□□□□□ -0.24
CKAP2-205ENST00000468284 ZSCAN1Q8NBB4 408 aa13.57□□□□□ -0.24
CKAP2-205ENST00000468284 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
CKAP2-205ENST00000468284 ZC3H4Q9UPT8 1303 aaKnown RBP13.57□□□□□ -0.24
CKAP2-205ENST00000468284 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
CKAP2-205ENST00000468284 FAM181BA6NEQ2 426 aa13.56□□□□□ -0.24
CKAP2-205ENST00000468284 SLC10A4Q96EP9 437 aa13.56□□□□□ -0.24
CKAP2-205ENST00000468284 SPATA31A1Q5TZJ5 1347 aa13.56□□□□□ -0.24
CKAP2-205ENST00000468284 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
CKAP2-205ENST00000468284 AP1G2O75843 785 aa13.55□□□□□ -0.24
CKAP2-205ENST00000468284 PPP1R26Q5T8A7 1209 aaPredicted RBP13.55□□□□□ -0.24
CKAP2-205ENST00000468284 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
CKAP2-205ENST00000468284 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
CKAP2-205ENST00000468284 MYOM1P52179 1685 aa13.55□□□□□ -0.24
CKAP2-205ENST00000468284 VSIG8P0DPA2 414 aa13.54□□□□□ -0.24
CKAP2-205ENST00000468284 LORP23490 312 aaPredicted RBP13.54□□□□□ -0.24
CKAP2-205ENST00000468284 PGPEP1Q9NXJ5 209 aa13.54□□□□□ -0.24
CKAP2-205ENST00000468284 CDV3Q9UKY7 258 aaKnown RBP13.54□□□□□ -0.24
CKAP2-205ENST00000468284 RPGRIP1LQ68CZ1 1315 aa13.54□□□□□ -0.24
CKAP2-205ENST00000468284 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
CKAP2-205ENST00000468284 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
CKAP2-205ENST00000468284 ZBTB7AO95365 584 aa13.53□□□□□ -0.24
CKAP2-205ENST00000468284 CHRNA2Q15822 529 aa13.53□□□□□ -0.24
CKAP2-205ENST00000468284 KCTD15Q96SI1 283 aaPredicted RBP13.53□□□□□ -0.24
CKAP2-205ENST00000468284 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
CKAP2-205ENST00000468284 DNMT3LQ9UJW3 386 aa13.53□□□□□ -0.24
CKAP2-205ENST00000468284 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
CKAP2-205ENST00000468284 CASZ1Q86V15 1759 aa13.53□□□□□ -0.24
CKAP2-205ENST00000468284 RRBP1Q9P2E9 1410 aaKnown RBP13.52□□□□□ -0.25
CKAP2-205ENST00000468284 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
CKAP2-205ENST00000468284 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
CKAP2-205ENST00000468284 PTK2Q05397 1052 aa13.51□□□□□ -0.25
CKAP2-205ENST00000468284 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.25
CKAP2-205ENST00000468284 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
CKAP2-205ENST00000468284 CBLBQ13191 982 aa13.5□□□□□ -0.25
CKAP2-205ENST00000468284 SYT17Q9BSW7 474 aa13.5□□□□□ -0.25
CKAP2-205ENST00000468284 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
CKAP2-205ENST00000468284 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
CKAP2-205ENST00000468284 YTHDC2Q9H6S0 1430 aaKnown RBP13.49□□□□□ -0.25
CKAP2-205ENST00000468284 DHX9Q08211 1270 aaKnown RBP13.49□□□□□ -0.25
CKAP2-205ENST00000468284 PDE3BQ13370 1112 aa13.49□□□□□ -0.25
CKAP2-205ENST00000468284 PTF1AQ7RTS3 328 aa13.49□□□□□ -0.25
CKAP2-205ENST00000468284 OCSTAMPQ9BR26 566 aa13.49□□□□□ -0.25
CKAP2-205ENST00000468284 GPSM3Q9Y4H4 160 aa13.49□□□□□ -0.25
CKAP2-205ENST00000468284 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
CKAP2-205ENST00000468284 TTLL8A6PVC2 850 aa13.48□□□□□ -0.25
CKAP2-205ENST00000468284 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
CKAP2-205ENST00000468284 Q6ZVU0 165 aa13.48□□□□□ -0.25
CKAP2-205ENST00000468284 USP17L8P0C7I0 530 aa13.47□□□□□ -0.25
CKAP2-205ENST00000468284 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.47□□□□□ -0.25
CKAP2-205ENST00000468284 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
CKAP2-205ENST00000468284 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
CKAP2-205ENST00000468284 ADAM32Q8TC27 787 aa13.47□□□□□ -0.25
CKAP2-205ENST00000468284 EPS8L1Q8TE68 723 aa13.47□□□□□ -0.25
CKAP2-205ENST00000468284 ZC3H6P61129 1189 aaKnown RBP13.46□□□□□ -0.25
CKAP2-205ENST00000468284 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.25
CKAP2-205ENST00000468284 CHD4Q14839 1912 aa13.45□□□□□ -0.26
CKAP2-205ENST00000468284 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
CKAP2-205ENST00000468284 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
CKAP2-205ENST00000468284 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms