RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 AEBP2Q6ZN18 517 aaPredicted RBP39.24■■■■□ 3.87
CKAP2-205ENST00000468284 CHIC1Q5VXU3 224 aa37.46■■■■□ 3.59
CKAP2-205ENST00000468284 SENP3Q9H4L4 574 aaPredicted RBP33.48■■■□□ 2.95
CKAP2-205ENST00000468284 PHF23Q9BUL5 403 aaPredicted RBP33.05■■■□□ 2.88
CKAP2-205ENST00000468284 FOXD1Q16676 465 aa31.16■■■□□ 2.58
CKAP2-205ENST00000468284 PLPPR3Q6T4P5 718 aa30.02■■■□□ 2.4
CKAP2-205ENST00000468284 PPP6R1Q9UPN7 881 aa29.26■■■□□ 2.27
CKAP2-205ENST00000468284 ADRA2BP18089 450 aa29.2■■■□□ 2.26
CKAP2-205ENST00000468284 PIAS4Q8N2W9 510 aaPredicted RBP29.2■■■□□ 2.26
CKAP2-205ENST00000468284 MSH5O43196 834 aa29.12■■■□□ 2.25
CKAP2-205ENST00000468284 POTEDQ86YR6 584 aa28.11■■■□□ 2.09
CKAP2-205ENST00000468284 MAPK8IP2Q13387 824 aaPredicted RBP26.76■■□□□ 1.87
CKAP2-205ENST00000468284 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
CKAP2-205ENST00000468284 DMRT2Q9Y5R5 561 aa26.56■■□□□ 1.84
CKAP2-205ENST00000468284 PPP4R3CPQ6ZMV5 832 aa26.33■■□□□ 1.81
CKAP2-205ENST00000468284 CNKSR2Q8WXI2 1034 aa25.81■■□□□ 1.72
CKAP2-205ENST00000468284 HOXD11P31277 338 aaPredicted RBP25.65■■□□□ 1.7
CKAP2-205ENST00000468284 RNF216Q9NWF9 866 aaPredicted RBP25.52■■□□□ 1.68
CKAP2-205ENST00000468284 DCAF8L1A6NGE4 600 aa25.51■■□□□ 1.67
CKAP2-205ENST00000468284 NCBP3Q53F19 620 aaKnown RBP25.39■■□□□ 1.66
CKAP2-205ENST00000468284 NPM3O75607 178 aaKnown RBP25■■□□□ 1.59
CKAP2-205ENST00000468284 CACNB1Q02641 598 aaPredicted RBP24.89■■□□□ 1.58
CKAP2-205ENST00000468284 RNF39Q9H2S5 420 aa24.85■■□□□ 1.57
CKAP2-205ENST00000468284 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
CKAP2-205ENST00000468284 KCNA4P22459 653 aa24.69■■□□□ 1.54
CKAP2-205ENST00000468284 C1QBPQ07021 282 aaKnown RBP24.5■■□□□ 1.51
CKAP2-205ENST00000468284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.48■■□□□ 1.511e-7■■■■■ 30.8
CKAP2-205ENST00000468284 U3KPZ7 1027 aaPredicted RBP23.96■■□□□ 1.43
CKAP2-205ENST00000468284 SLC4A2P04920 1241 aa23.82■■□□□ 1.4
CKAP2-205ENST00000468284 SPINK5Q9NQ38 1064 aaPredicted RBP23.56■■□□□ 1.36
CKAP2-205ENST00000468284 CAPN15O75808 1086 aa23.54■■□□□ 1.36
CKAP2-205ENST00000468284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
CKAP2-205ENST00000468284 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
CKAP2-205ENST00000468284 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
CKAP2-205ENST00000468284 APLP2Q06481 763 aa23.35■■□□□ 1.33
CKAP2-205ENST00000468284 DSG3P32926 999 aa23.33■■□□□ 1.33
CKAP2-205ENST00000468284 SAMD1Q6SPF0 538 aaPredicted RBP23.24■■□□□ 1.31
CKAP2-205ENST00000468284 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
CKAP2-205ENST00000468284 ZNF219Q9P2Y4 722 aaPredicted RBP23.17■■□□□ 1.3
CKAP2-205ENST00000468284 MYCNP04198 464 aaPredicted RBP23.15■■□□□ 1.3
CKAP2-205ENST00000468284 NISCHQ9Y2I1 1504 aa23.1■■□□□ 1.29
CKAP2-205ENST00000468284 ABCB7O75027 752 aa23■■□□□ 1.27
CKAP2-205ENST00000468284 FOXD4L1Q9NU39 408 aa23■■□□□ 1.27
CKAP2-205ENST00000468284 ZBTB22O15209 634 aa22.69■■□□□ 1.22
CKAP2-205ENST00000468284 POLA2Q14181 598 aa22.6■■□□□ 1.21
CKAP2-205ENST00000468284 ATF5Q9Y2D1 282 aaPredicted RBP22.57■■□□□ 1.2
CKAP2-205ENST00000468284 RBM42Q9BTD8 480 aaKnown RBP22.28■■□□□ 1.16
CKAP2-205ENST00000468284 ATXN8OSP0DMR3 200 aa22.26■■□□□ 1.15
CKAP2-205ENST00000468284 ZBTB12Q9Y330 459 aaPredicted RBP22.18■■□□□ 1.14
CKAP2-205ENST00000468284 POTEHQ6S545 545 aa22.07■■□□□ 1.12
CKAP2-205ENST00000468284 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
CKAP2-205ENST00000468284 CSRNP3Q8WYN3 585 aa21.8■■□□□ 1.08
CKAP2-205ENST00000468284 AKT1S1Q96B36 256 aa21.8■■□□□ 1.08
CKAP2-205ENST00000468284 ABCC9O60706 1549 aa21.76■■□□□ 1.07
CKAP2-205ENST00000468284 FBLN2P98095 1184 aa21.71■■□□□ 1.07
CKAP2-205ENST00000468284 CHRDL2Q6WN34 429 aa21.71■■□□□ 1.07
CKAP2-205ENST00000468284 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
CKAP2-205ENST00000468284 REM2Q8IYK8 340 aaPredicted RBP21.58■■□□□ 1.05
CKAP2-205ENST00000468284 MKRN4PQ13434 485 aaPredicted RBP21.54■■□□□ 1.04
CKAP2-205ENST00000468284 SPDYE2BA6NHP3 402 aa21.5■■□□□ 1.03
CKAP2-205ENST00000468284 SPDYE6P0CI01 402 aa21.5■■□□□ 1.03
CKAP2-205ENST00000468284 SPDYE2Q495Y8 402 aa21.5■■□□□ 1.03
CKAP2-205ENST00000468284 PITPNM1O00562 1244 aa21.36■■□□□ 1.01
CKAP2-205ENST00000468284 ZNF692Q9BU19 519 aaPredicted RBP21.27■■□□□ 1
CKAP2-205ENST00000468284 PIP4P2Q8N4L2 257 aa21.23■□□□□ 0.99
CKAP2-205ENST00000468284 SSUH2Q9Y2M2 353 aa21.22■□□□□ 0.99
CKAP2-205ENST00000468284 FXR2P51116 673 aaKnown RBP eCLIP21.12■□□□□ 0.97
CKAP2-205ENST00000468284 SPDYE1Q8NFV5 336 aaPredicted RBP21.08■□□□□ 0.97
CKAP2-205ENST00000468284 CLEC11AQ9Y240 323 aa21.05■□□□□ 0.96
CKAP2-205ENST00000468284 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
CKAP2-205ENST00000468284 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
CKAP2-205ENST00000468284 PRKAR2AP13861 404 aaKnown RBP20.82■□□□□ 0.92
CKAP2-205ENST00000468284 HAX1O00165 279 aa20.81■□□□□ 0.92
CKAP2-205ENST00000468284 SP7Q8TDD2 431 aaPredicted RBP20.78■□□□□ 0.92
CKAP2-205ENST00000468284 PRR29P0C7W0 189 aa20.72■□□□□ 0.91
CKAP2-205ENST00000468284 SPDYE4A6NLX3 237 aa20.64■□□□□ 0.89
CKAP2-205ENST00000468284 CHADLQ6NUI6 762 aa20.62■□□□□ 0.89
CKAP2-205ENST00000468284 EVX2Q03828 476 aa20.53■□□□□ 0.88
CKAP2-205ENST00000468284 C19orf67A6NJJ6 358 aa20.44■□□□□ 0.86
CKAP2-205ENST00000468284 STAG3Q9UJ98 1225 aa20.43■□□□□ 0.86
CKAP2-205ENST00000468284 FARP1Q9Y4F1 1045 aaPredicted RBP20.33■□□□□ 0.85
CKAP2-205ENST00000468284 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
CKAP2-205ENST00000468284 CREBZFQ9NS37 354 aa20.23■□□□□ 0.83
CKAP2-205ENST00000468284 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
CKAP2-205ENST00000468284 PROM2Q8N271 834 aa20.14■□□□□ 0.81
CKAP2-205ENST00000468284 GABBR2O75899 941 aa20.1■□□□□ 0.81
CKAP2-205ENST00000468284 NACADO15069 1562 aa19.96■□□□□ 0.79
CKAP2-205ENST00000468284 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
CKAP2-205ENST00000468284 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
CKAP2-205ENST00000468284 NPM1P06748 294 aaKnown RBP eCLIP19.89■□□□□ 0.77
CKAP2-205ENST00000468284 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
CKAP2-205ENST00000468284 MNX1P50219 401 aaPredicted RBP19.89■□□□□ 0.77
CKAP2-205ENST00000468284 ZNF579Q8NAF0 562 aaKnown RBP19.86■□□□□ 0.77
CKAP2-205ENST00000468284 CLCN6P51797 869 aa19.85■□□□□ 0.77
CKAP2-205ENST00000468284 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.76
CKAP2-205ENST00000468284 PAK3O75914 559 aaPredicted RBP19.81■□□□□ 0.76
CKAP2-205ENST00000468284 FKBP8Q14318 412 aa19.8■□□□□ 0.76
CKAP2-205ENST00000468284 DNAJC5Q9H3Z4 198 aa19.75■□□□□ 0.75
CKAP2-205ENST00000468284 PLEKHG5O94827 1062 aa19.67■□□□□ 0.74
CKAP2-205ENST00000468284 MIER1Q8N108 512 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms