RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 PARD3Q8TEW0 1356 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 SSFA2P28290 1259 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 ARHGEF25Q86VW2 580 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 TMC1Q8TDI8 760 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 MKRN1Q9UHC7 482 aaKnown RBP8.9□□□□□ -0.98
TPM3-214ENST00000466010 AKAP12Q02952 1782 aa8.9□□□□□ -0.98
TPM3-214ENST00000466010 BRWD3Q6RI45 1802 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 WDR17Q8IZU2 1322 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 ST20-MTHFSA0A0A6YYL1 179 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 SNPHO15079 494 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 LZTS3O60299 673 aaPredicted RBP8.89□□□□□ -0.99
TPM3-214ENST00000466010 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
TPM3-214ENST00000466010 TMF1P82094 1093 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 TOM1L2Q6ZVM7 507 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 CLP1Q92989 425 aaKnown RBP8.89□□□□□ -0.99
TPM3-214ENST00000466010 TESK2Q96S53 571 aa8.89□□□□□ -0.99
TPM3-214ENST00000466010 MON2Q7Z3U7 1717 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 USP47Q96K76 1375 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 UNCXA6NJT0 531 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 HOXB1P14653 301 aaPredicted RBP8.88□□□□□ -0.99
TPM3-214ENST00000466010 RASA1P20936 1047 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 MORN1Q5T089 497 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 SAMD7Q7Z3H4 446 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 SLC4A5Q9BY07 1137 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 USP54Q70EL1 1684 aa8.88□□□□□ -0.99
TPM3-214ENST00000466010 A0A1W2PP64 1363 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 CCDC7Q96M83 1385 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 NFAT5O94916 1531 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 SOWAHDA6NJG2 315 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 PHLDB3Q6NSJ2 640 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.87□□□□□ -0.99
TPM3-214ENST00000466010 DEPDC4Q8N2C3 294 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 CARD10Q9BWT7 1032 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 SLC12A5Q9H2X9 1139 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 OVOS2A0A0G2JMS6 1433 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 OVOS2A0A0J9YW53 1432 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 OVOS2Q6IE36 1432 aa8.87□□□□□ -0.99
TPM3-214ENST00000466010 ANKRD36BQ8N2N9 1353 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 ATP2B4P23634 1241 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 PTK7Q13308 1070 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 DDB1Q16531 1140 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 SWI5Q1ZZU3 235 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 CRTC2Q53ET0 693 aaPredicted RBP8.86□□□□□ -0.99
TPM3-214ENST00000466010 LAPTM4BQ86VI4 370 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 RNF135Q8IUD6 432 aa8.86□□□□□ -0.99
TPM3-214ENST00000466010 MRRFQ96E11 262 aaKnown RBP8.86□□□□□ -0.99
TPM3-214ENST00000466010 PARP4Q9UKK3 1724 aaKnown RBP8.85□□□□□ -0.99
TPM3-214ENST00000466010 MARSP56192 900 aaKnown RBP8.85□□□□□ -0.99
TPM3-214ENST00000466010 NCOA4Q13772 614 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 DNAJC14Q6Y2X3 702 aaPredicted RBP8.85□□□□□ -0.99
TPM3-214ENST00000466010 DEFB132Q7Z7B7 95 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 ANKMY2Q8IV38 441 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 COG3Q96JB2 828 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 USB1Q9BQ65 265 aaKnown RBP8.85□□□□□ -0.99
TPM3-214ENST00000466010 BCL2L13Q9BXK5 485 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 NBPF3Q9H094 633 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 BIN2Q9UBW5 565 aaPredicted RBP8.85□□□□□ -0.99
TPM3-214ENST00000466010 SLC27A5Q9Y2P5 690 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 GPSM3Q9Y4H4 160 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 BCL9O00512 1426 aa8.85□□□□□ -0.99
TPM3-214ENST00000466010 ERBB3P21860 1342 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 ACTN4O43707 911 aaKnown RBP8.84□□□□□ -0.99
TPM3-214ENST00000466010 HMGB1P09429 215 aaKnown RBP8.84□□□□□ -0.99
TPM3-214ENST00000466010 EML3Q32P44 896 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 MAMSTRQ6ZN01 415 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 TRIM50Q86XT4 487 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 NME9Q86XW9 330 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 PCGF6Q9BYE7 350 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
TPM3-214ENST00000466010 COL18A1P39060 1754 aa8.84□□□□□ -1
TPM3-214ENST00000466010 EXOC5O00471 708 aa8.83□□□□□ -1
TPM3-214ENST00000466010 TRIM37O94972 964 aa8.83□□□□□ -1
TPM3-214ENST00000466010 APBA3O96018 575 aa8.83□□□□□ -1
TPM3-214ENST00000466010 ATP1A2P50993 1020 aa8.83□□□□□ -1
TPM3-214ENST00000466010 PTK2Q05397 1052 aa8.83□□□□□ -1
TPM3-214ENST00000466010 PTPRNQ16849 979 aa8.83□□□□□ -1
TPM3-214ENST00000466010 MAP7D1Q3KQU3 841 aa8.83□□□□□ -1
TPM3-214ENST00000466010 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
TPM3-214ENST00000466010 FAM182BQ5T319 152 aa8.83□□□□□ -1
TPM3-214ENST00000466010 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
TPM3-214ENST00000466010 GPKOWQ92917 476 aaPredicted RBP eCLIP8.83□□□□□ -1
TPM3-214ENST00000466010 RTL1A6NKG5 1358 aa8.83□□□□□ -1
TPM3-214ENST00000466010 ARHGAP33O14559 1287 aa8.82□□□□□ -1
TPM3-214ENST00000466010 F12P00748 615 aaPredicted RBP8.82□□□□□ -1
TPM3-214ENST00000466010 SERPINB4P48594 390 aa8.82□□□□□ -1
TPM3-214ENST00000466010 PSEN2P49810 448 aa8.82□□□□□ -1
TPM3-214ENST00000466010 NBPF14Q5TI25 921 aa8.82□□□□□ -1
TPM3-214ENST00000466010 CAMKK2Q96RR4 588 aa8.82□□□□□ -1
TPM3-214ENST00000466010 BCL11AQ9H165 835 aa8.82□□□□□ -1
TPM3-214ENST00000466010 IGSF5Q9NSI5 407 aa8.82□□□□□ -1
TPM3-214ENST00000466010 CEP126Q9P2H0 1117 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms