RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ITGBL1O95965 494 aaPredicted RBP26.09■■□□□ 1.77
VARS-221ENST00000463184 ZNF34Q8IZ26 560 aa26.09■■□□□ 1.77
VARS-221ENST00000463184 GPC2Q8N158 579 aa26.09■■□□□ 1.77
VARS-221ENST00000463184 ZBTB3Q9H5J0 574 aa26.09■■□□□ 1.77
VARS-221ENST00000463184 CLEC11AQ9Y240 323 aa26.09■■□□□ 1.77
VARS-221ENST00000463184 CNTNAP1P78357 1384 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 RIC1Q4ADV7 1423 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 SNED1Q8TER0 1413 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 TMEM88BA6NKF7 163 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 GPTP24298 496 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 SUSD4Q5VX71 490 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 UBN2Q6ZU65 1347 aa26.08■■□□□ 1.77
VARS-221ENST00000463184 GIGYF2Q6Y7W6 1299 aaKnown RBP26.07■■□□□ 1.76
VARS-221ENST00000463184 RBM17Q96I25 401 aaKnown RBP26.07■■□□□ 1.76
VARS-221ENST00000463184 RNF123Q5XPI4 1314 aa26.07■■□□□ 1.76
VARS-221ENST00000463184 CAPN15O75808 1086 aa26.06■■□□□ 1.76
VARS-221ENST00000463184 CRAMP1Q96RY5 1269 aa26.06■■□□□ 1.76
VARS-221ENST00000463184 EIF6P56537 245 aaKnown RBP26.05■■□□□ 1.76
VARS-221ENST00000463184 PPP1R42Q7Z4L9 355 aa26.05■■□□□ 1.76
VARS-221ENST00000463184 TSPYL4Q9UJ04 414 aa26.05■■□□□ 1.76
VARS-221ENST00000463184 NTSR2O95665 410 aa26.04■■□□□ 1.76
VARS-221ENST00000463184 PARP10Q53GL7 1025 aa26.04■■□□□ 1.76
VARS-221ENST00000463184 CNTROBQ8N137 903 aa26.03■■□□□ 1.76
VARS-221ENST00000463184 BABAM1Q9NWV8 329 aa26.02■■□□□ 1.76
VARS-221ENST00000463184 ADAMTSL1Q8N6G6 1762 aa26.02■■□□□ 1.76
VARS-221ENST00000463184 PPEF1O14829 653 aaPredicted RBP26.01■■□□□ 1.75
VARS-221ENST00000463184 VEGFBP49765 207 aa26.01■■□□□ 1.75
VARS-221ENST00000463184 RIPK4P57078 832 aa26.01■■□□□ 1.75
VARS-221ENST00000463184 LARGE2Q8N3Y3 721 aa26.01■■□□□ 1.75
VARS-221ENST00000463184 NLRP3Q96P20 1036 aa26.01■■□□□ 1.75
VARS-221ENST00000463184 GJA3Q9Y6H8 435 aa26.01■■□□□ 1.75
VARS-221ENST00000463184 EIF2S2P20042 333 aaKnown RBP26■■□□□ 1.75
VARS-221ENST00000463184 LMOD1P29536 600 aaPredicted RBP26■■□□□ 1.75
VARS-221ENST00000463184 PDIA6Q15084 440 aa26■■□□□ 1.75
VARS-221ENST00000463184 MAP1SQ66K74 1059 aaPredicted RBP26■■□□□ 1.75
VARS-221ENST00000463184 LRP10Q7Z4F1 713 aa26■■□□□ 1.75
VARS-221ENST00000463184 SLC10A5Q5PT55 438 aa25.99■■□□□ 1.75
VARS-221ENST00000463184 UTP14AQ9BVJ6 771 aaKnown RBP25.99■■□□□ 1.75
VARS-221ENST00000463184 TMX4Q9H1E5 349 aaPredicted RBP25.99■■□□□ 1.75
VARS-221ENST00000463184 FOXN1O15353 648 aa25.98■■□□□ 1.75
VARS-221ENST00000463184 TCERG1O14776 1098 aaKnown RBP25.97■■□□□ 1.75
VARS-221ENST00000463184 LMOD3Q0VAK6 560 aa25.97■■□□□ 1.75
VARS-221ENST00000463184 RALBP1Q15311 655 aa25.97■■□□□ 1.75
VARS-221ENST00000463184 C3orf67Q6ZVT6 689 aa25.97■■□□□ 1.75
VARS-221ENST00000463184 VPS33BQ9H267 617 aa25.97■■□□□ 1.75
VARS-221ENST00000463184 COL4A5P29400 1685 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 RASSF10A6NK89 507 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 DEFB115Q30KQ5 88 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 NIM1KQ8IY84 436 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 AIDAQ96BJ3 306 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 PRDM10Q9NQV6 1147 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 ATP6V0A2Q9Y487 856 aa25.96■■□□□ 1.75
VARS-221ENST00000463184 SCNN1DP51172 638 aa25.95■■□□□ 1.74
VARS-221ENST00000463184 TMPOP42166 694 aaKnown RBP25.94■■□□□ 1.74
VARS-221ENST00000463184 EPS15P42566 896 aa25.94■■□□□ 1.74
VARS-221ENST00000463184 CTCFP49711 727 aaPredicted RBP25.94■■□□□ 1.74
VARS-221ENST00000463184 PROSER3Q2NL68 480 aa25.94■■□□□ 1.74
VARS-221ENST00000463184 HSP90AB3PQ58FF7 597 aa25.94■■□□□ 1.74
VARS-221ENST00000463184 PPIP5K2O43314 1243 aa25.93■■□□□ 1.74
VARS-221ENST00000463184 USP50Q70EL3 339 aaPredicted RBP25.93■■□□□ 1.74
VARS-221ENST00000463184 DDX21Q9NR30 783 aaKnown RBP eCLIP25.93■■□□□ 1.74
VARS-221ENST00000463184 WBP1LQ9NX94 342 aa25.93■■□□□ 1.74
VARS-221ENST00000463184 ANXA1P04083 346 aa25.92■■□□□ 1.74
VARS-221ENST00000463184 COPS6Q7L5N1 327 aa25.92■■□□□ 1.74
VARS-221ENST00000463184 SLC51AQ86UW1 340 aa25.92■■□□□ 1.74
VARS-221ENST00000463184 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
VARS-221ENST00000463184 ABCC4O15439 1325 aa25.91■■□□□ 1.74
VARS-221ENST00000463184 BBOX1O75936 387 aa25.91■■□□□ 1.74
VARS-221ENST00000463184 RTFDC1Q9BY42 306 aaPredicted RBP25.91■■□□□ 1.74
VARS-221ENST00000463184 ABT1Q9ULW3 272 aaKnown RBP25.91■■□□□ 1.74
VARS-221ENST00000463184 AOC3Q16853 763 aa25.9■■□□□ 1.74
VARS-221ENST00000463184 LTBP1Q14766 1721 aa25.9■■□□□ 1.74
VARS-221ENST00000463184 WDR33Q9C0J8 1336 aaKnown RBP25.89■■□□□ 1.74
VARS-221ENST00000463184 AIMP1Q12904 312 aaKnown RBP25.89■■□□□ 1.74
VARS-221ENST00000463184 TCIRG1Q13488 830 aa25.89■■□□□ 1.74
VARS-221ENST00000463184 NLRP10Q86W26 655 aa25.89■■□□□ 1.74
VARS-221ENST00000463184 SP8Q8IXZ3 490 aa25.89■■□□□ 1.74
VARS-221ENST00000463184 XAGE3Q8WTP9 111 aa25.89■■□□□ 1.74
VARS-221ENST00000463184 NECTIN2Q92692 538 aa25.89■■□□□ 1.74
VARS-221ENST00000463184 ZNRF3Q9ULT6 936 aa25.88■■□□□ 1.73
VARS-221ENST00000463184 MAP2K1Q02750 393 aaPredicted RBP25.87■■□□□ 1.73
VARS-221ENST00000463184 DPP8Q6V1X1 898 aaPredicted RBP25.87■■□□□ 1.73
VARS-221ENST00000463184 ADARB2Q9NS39 739 aaKnown RBP25.87■■□□□ 1.73
VARS-221ENST00000463184 GPRC5DQ9NZD1 345 aa25.87■■□□□ 1.73
VARS-221ENST00000463184 TRMT112Q9UI30 125 aaKnown RBP25.87■■□□□ 1.73
VARS-221ENST00000463184 CHL1O00533 1208 aa25.86■■□□□ 1.73
VARS-221ENST00000463184 HCLS1P14317 486 aaPredicted RBP25.86■■□□□ 1.73
VARS-221ENST00000463184 CXCL9Q07325 125 aa25.86■■□□□ 1.73
VARS-221ENST00000463184 DDX46Q7L014 1031 aaKnown RBP25.86■■□□□ 1.73
VARS-221ENST00000463184 MPNDQ8N594 471 aa25.86■■□□□ 1.73
VARS-221ENST00000463184 NEUROD2Q15784 382 aa25.85■■□□□ 1.73
VARS-221ENST00000463184 SH3TC1Q8TE82 1336 aa25.85■■□□□ 1.73
VARS-221ENST00000463184 LBX1P52954 281 aa25.84■■□□□ 1.73
VARS-221ENST00000463184 ECE1P42892 770 aa25.83■■□□□ 1.73
VARS-221ENST00000463184 FMR1Q06787 632 aaKnown RBP eCLIP25.83■■□□□ 1.732e-9■■■■■ 35.2
VARS-221ENST00000463184 KIAA2012Q0VF49 1180 aa25.83■■□□□ 1.73
VARS-221ENST00000463184 GRAPQ13588 217 aa25.83■■□□□ 1.73
VARS-221ENST00000463184 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.73
VARS-221ENST00000463184 GRAPLQ8TC17 118 aaPredicted RBP25.83■■□□□ 1.73
VARS-221ENST00000463184 ANKRD36CQ5JPF3 1778 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms