RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 ABCC12Q96J65 1359 aa26.2■■□□□ 1.78
HLA-F-222ENST00000462777 CACNA1SQ13698 1873 aa26.19■■□□□ 1.78
HLA-F-222ENST00000462777 SUSD4Q5VX71 490 aa26.19■■□□□ 1.78
HLA-F-222ENST00000462777 GIGYF2Q6Y7W6 1299 aaKnown RBP26.19■■□□□ 1.78
HLA-F-222ENST00000462777 ZNF34Q8IZ26 560 aa26.19■■□□□ 1.78
HLA-F-222ENST00000462777 PASKQ96RG2 1323 aa26.18■■□□□ 1.78
HLA-F-222ENST00000462777 PARP10Q53GL7 1025 aa26.18■■□□□ 1.78
HLA-F-222ENST00000462777 CRAMP1Q96RY5 1269 aa26.18■■□□□ 1.78
HLA-F-222ENST00000462777 UBN2Q6ZU65 1347 aa26.17■■□□□ 1.78
HLA-F-222ENST00000462777 TMEM88BA6NKF7 163 aa26.17■■□□□ 1.78
HLA-F-222ENST00000462777 EIF2S2P20042 333 aaKnown RBP26.17■■□□□ 1.78
HLA-F-222ENST00000462777 RIPK4P57078 832 aa26.17■■□□□ 1.78
HLA-F-222ENST00000462777 RNF123Q5XPI4 1314 aa26.16■■□□□ 1.78
HLA-F-222ENST00000462777 LAMB4A4D0S4 1761 aa26.16■■□□□ 1.78
HLA-F-222ENST00000462777 CAPN15O75808 1086 aa26.16■■□□□ 1.78
HLA-F-222ENST00000462777 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
HLA-F-222ENST00000462777 NLRP3Q96P20 1036 aa26.16■■□□□ 1.78
HLA-F-222ENST00000462777 BABAM1Q9NWV8 329 aa26.16■■□□□ 1.78
HLA-F-222ENST00000462777 RIC1Q4ADV7 1423 aa26.15■■□□□ 1.78
HLA-F-222ENST00000462777 PCNTO95613 3336 aa26.15■■□□□ 1.78
HLA-F-222ENST00000462777 ITGBL1O95965 494 aaPredicted RBP26.15■■□□□ 1.78
HLA-F-222ENST00000462777 LMOD1P29536 600 aaPredicted RBP26.15■■□□□ 1.78
HLA-F-222ENST00000462777 RALBP1Q15311 655 aa26.15■■□□□ 1.78
HLA-F-222ENST00000462777 LARGE2Q8N3Y3 721 aa26.15■■□□□ 1.78
HLA-F-222ENST00000462777 GJA3Q9Y6H8 435 aa26.15■■□□□ 1.78
HLA-F-222ENST00000462777 CNTNAP1P78357 1384 aa26.15■■□□□ 1.78
HLA-F-222ENST00000462777 SCN4AP35499 1836 aa26.14■■□□□ 1.78
HLA-F-222ENST00000462777 PPEF1O14829 653 aaPredicted RBP26.14■■□□□ 1.78
HLA-F-222ENST00000462777 NTSR2O95665 410 aa26.14■■□□□ 1.78
HLA-F-222ENST00000462777 UTP14AQ9BVJ6 771 aaKnown RBP26.14■■□□□ 1.78
HLA-F-222ENST00000462777 CNTROBQ8N137 903 aa26.13■■□□□ 1.77
HLA-F-222ENST00000462777 KDM3BQ7LBC6 1761 aa26.12■■□□□ 1.77
HLA-F-222ENST00000462777 TCERG1O14776 1098 aaKnown RBP26.12■■□□□ 1.77
HLA-F-222ENST00000462777 HSP90AB3PQ58FF7 597 aa26.11■■□□□ 1.77
HLA-F-222ENST00000462777 AIDAQ96BJ3 306 aa26.11■■□□□ 1.77
HLA-F-222ENST00000462777 MAP1SQ66K74 1059 aaPredicted RBP26.1■■□□□ 1.77
HLA-F-222ENST00000462777 NIM1KQ8IY84 436 aa26.1■■□□□ 1.77
HLA-F-222ENST00000462777 SNED1Q8TER0 1413 aa26.09■■□□□ 1.77
HLA-F-222ENST00000462777 TMPOP42166 694 aaKnown RBP26.09■■□□□ 1.77
HLA-F-222ENST00000462777 PDIA6Q15084 440 aa26.09■■□□□ 1.77
HLA-F-222ENST00000462777 SLC10A5Q5PT55 438 aa26.09■■□□□ 1.77
HLA-F-222ENST00000462777 DLG5Q8TDM6 1919 aa26.08■■□□□ 1.77
HLA-F-222ENST00000462777 VEGFBP49765 207 aa26.08■■□□□ 1.77
HLA-F-222ENST00000462777 VPS33BQ9H267 617 aa26.08■■□□□ 1.77
HLA-F-222ENST00000462777 PPIP5K2O43314 1243 aa26.07■■□□□ 1.76
HLA-F-222ENST00000462777 LRP10Q7Z4F1 713 aa26.07■■□□□ 1.76
HLA-F-222ENST00000462777 SUPT20HQ8NEM7 779 aa26.07■■□□□ 1.76
HLA-F-222ENST00000462777 ATP6V0A2Q9Y487 856 aa26.07■■□□□ 1.76
HLA-F-222ENST00000462777 NUP98P52948 1817 aa26.07■■□□□ 1.76
HLA-F-222ENST00000462777 AIMP1Q12904 312 aaKnown RBP26.06■■□□□ 1.76
HLA-F-222ENST00000462777 DEFB115Q30KQ5 88 aa26.06■■□□□ 1.76
HLA-F-222ENST00000462777 C3orf67Q6ZVT6 689 aa26.06■■□□□ 1.76
HLA-F-222ENST00000462777 COPS6Q7L5N1 327 aa26.06■■□□□ 1.76
HLA-F-222ENST00000462777 BBOX1O75936 387 aa26.05■■□□□ 1.76
HLA-F-222ENST00000462777 ANXA1P04083 346 aa26.05■■□□□ 1.76
HLA-F-222ENST00000462777 PROSER3Q2NL68 480 aa26.05■■□□□ 1.76
HLA-F-222ENST00000462777 NECTIN2Q92692 538 aa26.05■■□□□ 1.76
HLA-F-222ENST00000462777 CTCFP49711 727 aaPredicted RBP26.04■■□□□ 1.76
HLA-F-222ENST00000462777 NEUROD2Q15784 382 aa26.04■■□□□ 1.76
HLA-F-222ENST00000462777 USP50Q70EL3 339 aaPredicted RBP26.04■■□□□ 1.76
HLA-F-222ENST00000462777 ABT1Q9ULW3 272 aaKnown RBP26.04■■□□□ 1.76
HLA-F-222ENST00000462777 RASSF10A6NK89 507 aa26.03■■□□□ 1.76
HLA-F-222ENST00000462777 FOXN1O15353 648 aa26.03■■□□□ 1.76
HLA-F-222ENST00000462777 EPS15P42566 896 aa26.03■■□□□ 1.76
HLA-F-222ENST00000462777 SCNN1DP51172 638 aa26.03■■□□□ 1.76
HLA-F-222ENST00000462777 XAGE3Q8WTP9 111 aa26.03■■□□□ 1.76
HLA-F-222ENST00000462777 PRDM10Q9NQV6 1147 aa26.03■■□□□ 1.76
HLA-F-222ENST00000462777 TRMT112Q9UI30 125 aaKnown RBP26.03■■□□□ 1.76
HLA-F-222ENST00000462777 TCIRG1Q13488 830 aa26.02■■□□□ 1.76
HLA-F-222ENST00000462777 AOC3Q16853 763 aa26.02■■□□□ 1.76
HLA-F-222ENST00000462777 DDX46Q7L014 1031 aaKnown RBP26.02■■□□□ 1.76
HLA-F-222ENST00000462777 NLRP10Q86W26 655 aa26.02■■□□□ 1.76
HLA-F-222ENST00000462777 DDX21Q9NR30 783 aaKnown RBP eCLIP26.02■■□□□ 1.76
HLA-F-222ENST00000462777 ABCC4O15439 1325 aa26.02■■□□□ 1.76
HLA-F-222ENST00000462777 DPP8Q6V1X1 898 aaPredicted RBP26.01■■□□□ 1.75
HLA-F-222ENST00000462777 SP8Q8IXZ3 490 aa26.01■■□□□ 1.75
HLA-F-222ENST00000462777 ZNRF3Q9ULT6 936 aa26.01■■□□□ 1.75
HLA-F-222ENST00000462777 LAS1LQ9Y4W2 734 aaKnown RBP26.01■■□□□ 1.75
HLA-F-222ENST00000462777 HCLS1P14317 486 aaPredicted RBP26■■□□□ 1.75
HLA-F-222ENST00000462777 WDR43Q15061 677 aaKnown RBP eCLIP26■■□□□ 1.75
HLA-F-222ENST00000462777 CCDC146Q8IYE0 955 aa26■■□□□ 1.75
HLA-F-222ENST00000462777 MPNDQ8N594 471 aa26■■□□□ 1.75
HLA-F-222ENST00000462777 SH3TC1Q8TE82 1336 aa25.99■■□□□ 1.75
HLA-F-222ENST00000462777 MYBBP1AQ9BQG0 1328 aaKnown RBP25.99■■□□□ 1.75
HLA-F-222ENST00000462777 CHL1O00533 1208 aa25.99■■□□□ 1.75
HLA-F-222ENST00000462777 RTFDC1Q9BY42 306 aaPredicted RBP25.99■■□□□ 1.75
HLA-F-222ENST00000462777 WBP1LQ9NX94 342 aa25.99■■□□□ 1.75
HLA-F-222ENST00000462777 MAP2K1Q02750 393 aaPredicted RBP25.98■■□□□ 1.75
HLA-F-222ENST00000462777 RUNDC1Q96C34 613 aa25.98■■□□□ 1.75
HLA-F-222ENST00000462777 ADARB2Q9NS39 739 aaKnown RBP25.98■■□□□ 1.75
HLA-F-222ENST00000462777 COL4A5P29400 1685 aa25.97■■□□□ 1.75
HLA-F-222ENST00000462777 WDR33Q9C0J8 1336 aaKnown RBP25.97■■□□□ 1.75
HLA-F-222ENST00000462777 SLC51AQ86UW1 340 aa25.97■■□□□ 1.75
HLA-F-222ENST00000462777 ADAMTSL1Q8N6G6 1762 aa25.97■■□□□ 1.75
HLA-F-222ENST00000462777 CXCL9Q07325 125 aa25.96■■□□□ 1.75
HLA-F-222ENST00000462777 DDX10Q13206 875 aaKnown RBP25.96■■□□□ 1.75
HLA-F-222ENST00000462777 GRAPQ13588 217 aa25.96■■□□□ 1.75
HLA-F-222ENST00000462777 PAXIP1Q6ZW49 1069 aaPredicted RBP25.96■■□□□ 1.75
HLA-F-222ENST00000462777 TMC4Q7Z404 712 aa25.96■■□□□ 1.75
HLA-F-222ENST00000462777 GRAPLQ8TC17 118 aaPredicted RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms