RNA–Protein interactions for RNA: ENST00000462047.1

PPP2R1A-204, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-204ENST00000462047 RIC1Q4ADV7 1423 aa22.04■■□□□ 1.12
PPP2R1A-204ENST00000462047 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 HSP90AB3PQ58FF7 597 aa22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 LDHDQ86WU2 507 aa22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 RUNDC1Q96C34 613 aa22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 UTP14AQ9BVJ6 771 aaKnown RBP22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 TAF1DQ9H5J8 278 aaPredicted RBP22.03■■□□□ 1.12
PPP2R1A-204ENST00000462047 FZD9O00144 591 aa22.02■■□□□ 1.12
PPP2R1A-204ENST00000462047 NTSR2O95665 410 aa22.02■■□□□ 1.12
PPP2R1A-204ENST00000462047 SLC10A5Q5PT55 438 aa22.02■■□□□ 1.12
PPP2R1A-204ENST00000462047 LRP10Q7Z4F1 713 aa22.02■■□□□ 1.12
PPP2R1A-204ENST00000462047 HACL1Q9UJ83 578 aa22.02■■□□□ 1.12
PPP2R1A-204ENST00000462047 CHL1O00533 1208 aa22.01■■□□□ 1.11
PPP2R1A-204ENST00000462047 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
PPP2R1A-204ENST00000462047 CREBZFQ9NS37 354 aa22.01■■□□□ 1.11
PPP2R1A-204ENST00000462047 NUP98P52948 1817 aa22.01■■□□□ 1.11
PPP2R1A-204ENST00000462047 CACNA1SQ13698 1873 aa22■■□□□ 1.11
PPP2R1A-204ENST00000462047 COPS6Q7L5N1 327 aa22■■□□□ 1.11
PPP2R1A-204ENST00000462047 PNMA8AQ86V59 439 aaPredicted RBP22■■□□□ 1.11
PPP2R1A-204ENST00000462047 GPC2Q8N158 579 aa22■■□□□ 1.11
PPP2R1A-204ENST00000462047 RNF123Q5XPI4 1314 aa22■■□□□ 1.11
PPP2R1A-204ENST00000462047 POTEIP0CG38 1075 aa21.99■■□□□ 1.11
PPP2R1A-204ENST00000462047 POTEJP0CG39 1038 aa21.99■■□□□ 1.11
PPP2R1A-204ENST00000462047 EIF6P56537 245 aaKnown RBP21.99■■□□□ 1.11
PPP2R1A-204ENST00000462047 PROSER3Q2NL68 480 aa21.99■■□□□ 1.11
PPP2R1A-204ENST00000462047 DDX21Q9NR30 783 aaKnown RBP eCLIP21.99■■□□□ 1.11
PPP2R1A-204ENST00000462047 ZNF541Q9H0D2 1346 aa21.99■■□□□ 1.11
PPP2R1A-204ENST00000462047 PPEF1O14829 653 aaPredicted RBP21.98■■□□□ 1.11
PPP2R1A-204ENST00000462047 ANXA1P04083 346 aa21.98■■□□□ 1.11
PPP2R1A-204ENST00000462047 AIMP1Q12904 312 aaKnown RBP21.98■■□□□ 1.11
PPP2R1A-204ENST00000462047 XAGE3Q8WTP9 111 aa21.98■■□□□ 1.11
PPP2R1A-204ENST00000462047 CLEC11AQ9Y240 323 aa21.98■■□□□ 1.11
PPP2R1A-204ENST00000462047 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
PPP2R1A-204ENST00000462047 EPHX2P34913 555 aa21.97■■□□□ 1.11
PPP2R1A-204ENST00000462047 EAPPQ56P03 285 aaPredicted RBP21.97■■□□□ 1.11
PPP2R1A-204ENST00000462047 LARGE2Q8N3Y3 721 aa21.97■■□□□ 1.11
PPP2R1A-204ENST00000462047 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
PPP2R1A-204ENST00000462047 ADAMTS8Q9UP79 889 aa21.97■■□□□ 1.11
PPP2R1A-204ENST00000462047 BBOX1O75936 387 aa21.96■■□□□ 1.11
PPP2R1A-204ENST00000462047 TCIRG1Q13488 830 aa21.96■■□□□ 1.11
PPP2R1A-204ENST00000462047 VPS33BQ9H267 617 aa21.96■■□□□ 1.11
PPP2R1A-204ENST00000462047 TRIM35Q9UPQ4 493 aa21.96■■□□□ 1.11
PPP2R1A-204ENST00000462047 SCN4AP35499 1836 aa21.95■■□□□ 1.1
PPP2R1A-204ENST00000462047 TCERG1O14776 1098 aaKnown RBP21.95■■□□□ 1.1
PPP2R1A-204ENST00000462047 HOXB7P09629 217 aa21.95■■□□□ 1.1
PPP2R1A-204ENST00000462047 NLRP10Q86W26 655 aa21.95■■□□□ 1.1
PPP2R1A-204ENST00000462047 ATP6V0A2Q9Y487 856 aa21.95■■□□□ 1.1
PPP2R1A-204ENST00000462047 C3orf67Q6ZVT6 689 aa21.94■■□□□ 1.1
PPP2R1A-204ENST00000462047 SUPT20HQ8NEM7 779 aa21.94■■□□□ 1.1
PPP2R1A-204ENST00000462047 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
PPP2R1A-204ENST00000462047 GJA3Q9Y6H8 435 aa21.94■■□□□ 1.1
PPP2R1A-204ENST00000462047 ITGBL1O95965 494 aaPredicted RBP21.93■■□□□ 1.1
PPP2R1A-204ENST00000462047 LMOD1P29536 600 aaPredicted RBP21.93■■□□□ 1.1
PPP2R1A-204ENST00000462047 HDGFL1Q5TGJ6 251 aa21.93■■□□□ 1.1
PPP2R1A-204ENST00000462047 SNED1Q8TER0 1413 aa21.93■■□□□ 1.1
PPP2R1A-204ENST00000462047 PASKQ96RG2 1323 aa21.93■■□□□ 1.1
PPP2R1A-204ENST00000462047 SH3TC1Q8TE82 1336 aa21.92■■□□□ 1.1
PPP2R1A-204ENST00000462047 NIM1KQ8IY84 436 aa21.92■■□□□ 1.1
PPP2R1A-204ENST00000462047 CFAP44Q96MT7 982 aa21.92■■□□□ 1.1
PPP2R1A-204ENST00000462047 DBF4Q9UBU7 674 aaPredicted RBP21.92■■□□□ 1.1
PPP2R1A-204ENST00000462047 TMEM88BA6NKF7 163 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 COL13A1Q5TAT6 717 aaPredicted RBP21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 ANKRD13DQ6ZTN6 518 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 DDX46Q7L014 1031 aaKnown RBP21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 SP8Q8IXZ3 490 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 CNTROBQ8N137 903 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 PLBD2Q8NHP8 589 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 CHPF2Q9P2E5 772 aa21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 MKRN1Q9UHC7 482 aaKnown RBP21.91■■□□□ 1.1
PPP2R1A-204ENST00000462047 ABCC4O15439 1325 aa21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 HSPA1AP0DMV8 641 aaKnown RBP21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 HSPA1BP0DMV9 641 aaKnown RBP21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 HCLS1P14317 486 aaPredicted RBP21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 PRKRIP1Q9H875 184 aaPredicted RBP21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 HYPKQ9NX55 129 aa21.9■■□□□ 1.1
PPP2R1A-204ENST00000462047 PCNTO95613 3336 aa21.89■■□□□ 1.1
PPP2R1A-204ENST00000462047 CALD1Q05682 793 aaKnown RBP21.89■■□□□ 1.09
PPP2R1A-204ENST00000462047 TMC4Q7Z404 712 aa21.89■■□□□ 1.09
PPP2R1A-204ENST00000462047 DPP8Q6V1X1 898 aaPredicted RBP21.88■■□□□ 1.09
PPP2R1A-204ENST00000462047 MPNDQ8N594 471 aa21.88■■□□□ 1.09
PPP2R1A-204ENST00000462047 RTFDC1Q9BY42 306 aaPredicted RBP21.88■■□□□ 1.09
PPP2R1A-204ENST00000462047 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
PPP2R1A-204ENST00000462047 MAP1SQ66K74 1059 aaPredicted RBP21.87■■□□□ 1.09
PPP2R1A-204ENST00000462047 ZNRF3Q9ULT6 936 aa21.87■■□□□ 1.09
PPP2R1A-204ENST00000462047 GRAPQ13588 217 aa21.86■■□□□ 1.09
PPP2R1A-204ENST00000462047 AOC3Q16853 763 aa21.86■■□□□ 1.09
PPP2R1A-204ENST00000462047 USP50Q70EL3 339 aaPredicted RBP21.86■■□□□ 1.09
PPP2R1A-204ENST00000462047 GRAPLQ8TC17 118 aaPredicted RBP21.86■■□□□ 1.09
PPP2R1A-204ENST00000462047 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
PPP2R1A-204ENST00000462047 CNTNAP1P78357 1384 aa21.86■■□□□ 1.09
PPP2R1A-204ENST00000462047 EPS15P42566 896 aa21.85■■□□□ 1.09
PPP2R1A-204ENST00000462047 TNS4Q8IZW8 715 aa21.85■■□□□ 1.09
PPP2R1A-204ENST00000462047 ISCA1Q9BUE6 129 aa21.85■■□□□ 1.09
PPP2R1A-204ENST00000462047 SCNN1DP51172 638 aa21.84■■□□□ 1.09
PPP2R1A-204ENST00000462047 GNAI1P63096 354 aa21.84■■□□□ 1.09
PPP2R1A-204ENST00000462047 TRIM28Q13263 835 aaKnown RBP21.84■■□□□ 1.09
PPP2R1A-204ENST00000462047 MBIPQ9NS73 344 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms