RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 ANXA1P04083 346 aa19.78■□□□□ 0.76
COL16A1-206ENST00000461217 NECTIN2Q92692 538 aa19.78■□□□□ 0.76
COL16A1-206ENST00000461217 RBM17Q96I25 401 aaKnown RBP19.78■□□□□ 0.76
COL16A1-206ENST00000461217 L3MBTL3Q96JM7 780 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-206ENST00000461217 BABAM1Q9NWV8 329 aa19.78■□□□□ 0.76
COL16A1-206ENST00000461217 SCN4AP35499 1836 aa19.77■□□□□ 0.76
COL16A1-206ENST00000461217 PARP10Q53GL7 1025 aa19.77■□□□□ 0.76
COL16A1-206ENST00000461217 EAPPQ56P03 285 aaPredicted RBP19.77■□□□□ 0.76
COL16A1-206ENST00000461217 CC2D2BQ6DHV5 1058 aa19.77■□□□□ 0.76
COL16A1-206ENST00000461217 JDP2Q8WYK2 163 aa19.77■□□□□ 0.76
COL16A1-206ENST00000461217 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
COL16A1-206ENST00000461217 TCERG1O14776 1098 aaKnown RBP19.76■□□□□ 0.75
COL16A1-206ENST00000461217 PPEF1O14829 653 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-206ENST00000461217 PROSER3Q2NL68 480 aa19.76■□□□□ 0.75
COL16A1-206ENST00000461217 LDHDQ86WU2 507 aa19.76■□□□□ 0.75
COL16A1-206ENST00000461217 PSMD1Q99460 953 aa19.76■□□□□ 0.75
COL16A1-206ENST00000461217 TAF1DQ9H5J8 278 aaPredicted RBP19.76■□□□□ 0.75
COL16A1-206ENST00000461217 HACL1Q9UJ83 578 aa19.76■□□□□ 0.75
COL16A1-206ENST00000461217 HOXA10P31260 410 aaPredicted RBP19.75■□□□□ 0.75
COL16A1-206ENST00000461217 AIMP1Q12904 312 aaKnown RBP19.75■□□□□ 0.75
COL16A1-206ENST00000461217 PDIA6Q15084 440 aa19.75■□□□□ 0.75
COL16A1-206ENST00000461217 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
COL16A1-206ENST00000461217 UTP14AQ9BVJ6 771 aaKnown RBP19.75■□□□□ 0.75
COL16A1-206ENST00000461217 TMX4Q9H1E5 349 aaPredicted RBP19.75■□□□□ 0.75
COL16A1-206ENST00000461217 CLEC11AQ9Y240 323 aa19.75■□□□□ 0.75
COL16A1-206ENST00000461217 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
COL16A1-206ENST00000461217 FZD9O00144 591 aa19.74■□□□□ 0.75
COL16A1-206ENST00000461217 LRP10Q7Z4F1 713 aa19.74■□□□□ 0.75
COL16A1-206ENST00000461217 RUNDC1Q96C34 613 aa19.74■□□□□ 0.75
COL16A1-206ENST00000461217 CRAMP1Q96RY5 1269 aa19.74■□□□□ 0.75
COL16A1-206ENST00000461217 SNED1Q8TER0 1413 aa19.74■□□□□ 0.75
COL16A1-206ENST00000461217 ANKRD36CQ5JPF3 1778 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 EPHX2P34913 555 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 EIF6P56537 245 aaKnown RBP19.73■□□□□ 0.75
COL16A1-206ENST00000461217 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 HSP90AB3PQ58FF7 597 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 C3orf67Q6ZVT6 689 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 COPS6Q7L5N1 327 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 XAGE3Q8WTP9 111 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 CREBZFQ9NS37 354 aa19.73■□□□□ 0.75
COL16A1-206ENST00000461217 GPC2Q8N158 579 aa19.72■□□□□ 0.75
COL16A1-206ENST00000461217 LARGE2Q8N3Y3 721 aa19.72■□□□□ 0.75
COL16A1-206ENST00000461217 GJA3Q9Y6H8 435 aa19.72■□□□□ 0.75
COL16A1-206ENST00000461217 HSPA1AP0DMV8 641 aaKnown RBP19.71■□□□□ 0.75
COL16A1-206ENST00000461217 HSPA1BP0DMV9 641 aaKnown RBP19.71■□□□□ 0.75
COL16A1-206ENST00000461217 KRT24Q2M2I5 525 aa19.71■□□□□ 0.75
COL16A1-206ENST00000461217 PNMA8AQ86V59 439 aaPredicted RBP19.71■□□□□ 0.75
COL16A1-206ENST00000461217 MKRN1Q9UHC7 482 aaKnown RBP19.71■□□□□ 0.75
COL16A1-206ENST00000461217 COL13A1Q5TAT6 717 aaPredicted RBP19.7■□□□□ 0.74
COL16A1-206ENST00000461217 DDX21Q9NR30 783 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL16A1-206ENST00000461217 COL4A5P29400 1685 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 CHL1O00533 1208 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 LMOD1P29536 600 aaPredicted RBP19.69■□□□□ 0.74
COL16A1-206ENST00000461217 HDGFL1Q5TGJ6 251 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 SLC51AQ86UW1 340 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 NIM1KQ8IY84 436 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 CHPF2Q9P2E5 772 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
COL16A1-206ENST00000461217 ADAMTS8Q9UP79 889 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 TRIM35Q9UPQ4 493 aa19.69■□□□□ 0.74
COL16A1-206ENST00000461217 PPIP5K2O43314 1243 aa19.68■□□□□ 0.74
COL16A1-206ENST00000461217 SLC10A5Q5PT55 438 aa19.68■□□□□ 0.74
COL16A1-206ENST00000461217 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
COL16A1-206ENST00000461217 ABCC4O15439 1325 aa19.68■□□□□ 0.74
COL16A1-206ENST00000461217 PASKQ96RG2 1323 aa19.68■□□□□ 0.74
COL16A1-206ENST00000461217 HCLS1P14317 486 aaPredicted RBP19.67■□□□□ 0.74
COL16A1-206ENST00000461217 TCIRG1Q13488 830 aa19.67■□□□□ 0.74
COL16A1-206ENST00000461217 ATP6V0A2Q9Y487 856 aa19.67■□□□□ 0.74
COL16A1-206ENST00000461217 LAMB2P55268 1798 aa19.67■□□□□ 0.74
COL16A1-206ENST00000461217 ADAMTSL1Q8N6G6 1762 aa19.67■□□□□ 0.74
COL16A1-206ENST00000461217 MAP1SQ66K74 1059 aaPredicted RBP19.66■□□□□ 0.74
COL16A1-206ENST00000461217 ZNF428Q96B54 188 aa19.66■□□□□ 0.74
COL16A1-206ENST00000461217 SH3TC1Q8TE82 1336 aa19.66■□□□□ 0.74
COL16A1-206ENST00000461217 TMEM88BA6NKF7 163 aa19.65■□□□□ 0.74
COL16A1-206ENST00000461217 ITGBL1O95965 494 aaPredicted RBP19.65■□□□□ 0.74
COL16A1-206ENST00000461217 AOC3Q16853 763 aa19.65■□□□□ 0.74
COL16A1-206ENST00000461217 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
COL16A1-206ENST00000461217 SUPT20HQ8NEM7 779 aa19.65■□□□□ 0.74
COL16A1-206ENST00000461217 CNTNAP1P78357 1384 aa19.65■□□□□ 0.74
COL16A1-206ENST00000461217 ANP32CO43423 234 aa19.64■□□□□ 0.73
COL16A1-206ENST00000461217 HOXB7P09629 217 aa19.64■□□□□ 0.73
COL16A1-206ENST00000461217 DPP8Q6V1X1 898 aaPredicted RBP19.64■□□□□ 0.73
COL16A1-206ENST00000461217 TNS4Q8IZW8 715 aa19.64■□□□□ 0.73
COL16A1-206ENST00000461217 CNTROBQ8N137 903 aa19.64■□□□□ 0.73
COL16A1-206ENST00000461217 DBF4Q9UBU7 674 aaPredicted RBP19.64■□□□□ 0.73
COL16A1-206ENST00000461217 BBOX1O75936 387 aa19.63■□□□□ 0.73
COL16A1-206ENST00000461217 PLBD2Q8NHP8 589 aa19.63■□□□□ 0.73
COL16A1-206ENST00000461217 CFAP44Q96MT7 982 aa19.63■□□□□ 0.73
COL16A1-206ENST00000461217 PRKRIP1Q9H875 184 aaPredicted RBP19.63■□□□□ 0.73
COL16A1-206ENST00000461217 LTBP1Q14766 1721 aa19.62■□□□□ 0.73
COL16A1-206ENST00000461217 SCNN1DP51172 638 aa19.62■□□□□ 0.73
COL16A1-206ENST00000461217 DUSP27Q5VZP5 1158 aa19.62■□□□□ 0.73
COL16A1-206ENST00000461217 ANKRD13DQ6ZTN6 518 aa19.62■□□□□ 0.73
COL16A1-206ENST00000461217 MPNDQ8N594 471 aa19.62■□□□□ 0.73
COL16A1-206ENST00000461217 EPS15P42566 896 aa19.61■□□□□ 0.73
COL16A1-206ENST00000461217 GRAPQ13588 217 aa19.61■□□□□ 0.73
COL16A1-206ENST00000461217 SP8Q8IXZ3 490 aa19.61■□□□□ 0.73
COL16A1-206ENST00000461217 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
COL16A1-206ENST00000461217 VPS33BQ9H267 617 aa19.61■□□□□ 0.73
COL16A1-206ENST00000461217 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms