RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 CRY2Q49AN0 593 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 NUTM1Q86Y26 1132 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 NYXQ9GZU5 481 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 PCNTO95613 3336 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 ERBB4Q15303 1308 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 UBN2Q6ZU65 1347 aa11.57□□□□□ -0.56
SOX2-OT-202ENST00000461063 DDNO94850 711 aaPredicted RBP11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 GPTP24298 496 aa11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 PDIA6Q15084 440 aa11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 BABAM1Q9NWV8 329 aa11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
SOX2-OT-202ENST00000461063 SUSD4Q5VX71 490 aa11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 ZNF34Q8IZ26 560 aa11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 JMYQ8N9B5 988 aa11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 ZNF277Q9NRM2 450 aaPredicted RBP11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 MYBBP1AQ9BQG0 1328 aaKnown RBP11.55□□□□□ -0.56
SOX2-OT-202ENST00000461063 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 RIC1Q4ADV7 1423 aa11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 NTSR2O95665 410 aa11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 HOXA10P31260 410 aaPredicted RBP11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
SOX2-OT-202ENST00000461063 SNED1Q8TER0 1413 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 DICER1Q9UPY3 1922 aaKnown RBP11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 PROSER3Q2NL68 480 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 CACNA1SQ13698 1873 aa11.53□□□□□ -0.56
SOX2-OT-202ENST00000461063 IQCA1LA6NCM1 817 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 CHL1O00533 1208 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 ANXA1P04083 346 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 IARSP41252 1262 aaKnown RBP11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 PARP10Q53GL7 1025 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 PPP1R42Q7Z4L9 355 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 PSMD1Q99460 953 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 TRIM35Q9UPQ4 493 aa11.52□□□□□ -0.57
SOX2-OT-202ENST00000461063 FZD9O00144 591 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 CC2D2BQ6DHV5 1058 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 NECTIN2Q92692 538 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 RBM17Q96I25 401 aaKnown RBP11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 CRAMP1Q96RY5 1269 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 TAF1DQ9H5J8 278 aaPredicted RBP11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 NUP98P52948 1817 aa11.51□□□□□ -0.57
SOX2-OT-202ENST00000461063 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 KRT24Q2M2I5 525 aa11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 SLC10A5Q5PT55 438 aa11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 LDHDQ86WU2 507 aa11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
SOX2-OT-202ENST00000461063 TCERG1O14776 1098 aaKnown RBP11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 AIMP1Q12904 312 aaKnown RBP11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 JDP2Q8WYK2 163 aa11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 NLRP3Q96P20 1036 aa11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 HACL1Q9UJ83 578 aa11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 LAS1LQ9Y4W2 734 aaKnown RBP11.49□□□□□ -0.57
SOX2-OT-202ENST00000461063 EPHX2P34913 555 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 EAPPQ56P03 285 aaPredicted RBP11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 HSP90AB3PQ58FF7 597 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 NLRP10Q86W26 655 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 GPC2Q8N158 579 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 RNF123Q5XPI4 1314 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 COL4A5P29400 1685 aa11.48□□□□□ -0.57
SOX2-OT-202ENST00000461063 PASKQ96RG2 1323 aa11.47□□□□□ -0.57
SOX2-OT-202ENST00000461063 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
SOX2-OT-202ENST00000461063 LARGE2Q8N3Y3 721 aa11.47□□□□□ -0.57
SOX2-OT-202ENST00000461063 CHPF2Q9P2E5 772 aa11.47□□□□□ -0.57
SOX2-OT-202ENST00000461063 ATP6V0A2Q9Y487 856 aa11.47□□□□□ -0.57
SOX2-OT-202ENST00000461063 ABCC4O15439 1325 aa11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 ITGBL1O95965 494 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 HOXB7P09629 217 aa11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 HCLS1P14317 486 aaPredicted RBP11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 EIF6P56537 245 aaKnown RBP11.46□□□□□ -0.57
SOX2-OT-202ENST00000461063 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms