RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 BCAR3O75815 825 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 GPTP24298 496 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 CASP7P55210 303 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 CRY2Q49AN0 593 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 HSP90AB3PQ58FF7 597 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 SLC10A5Q5PT55 438 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 BICDL1Q6ZP65 573 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 C3orf67Q6ZVT6 689 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 DNAAF4Q8WXU2 420 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 SMC4Q9NTJ3 1288 aa10.45□□□□□ -0.74
SND1-202ENST00000461056 NUP98P52948 1817 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 AFDNP55196 1824 aaKnown RBP10.44□□□□□ -0.74
SND1-202ENST00000461056 TNRC6CQ9HCJ0 1690 aaKnown RBP10.44□□□□□ -0.74
SND1-202ENST00000461056 ABCC4O15439 1325 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 DDX58O95786 925 aaKnown RBP10.44□□□□□ -0.74
SND1-202ENST00000461056 FKBP5Q13451 457 aaPredicted RBP10.44□□□□□ -0.74
SND1-202ENST00000461056 SYNE4Q8N205 404 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 CNBD1Q8NA66 436 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 ARHGAP45Q92619 1136 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
SND1-202ENST00000461056 ANKRD31Q8N7Z5 1873 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 ANKRD36CQ5JPF3 1778 aa10.44□□□□□ -0.74
SND1-202ENST00000461056 ERFEQ4G0M1 354 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 NPM2Q86SE8 214 aaKnown RBP10.43□□□□□ -0.74
SND1-202ENST00000461056 NBPF5PQ86XG9 351 aaPredicted RBP10.43□□□□□ -0.74
SND1-202ENST00000461056 CCDC191Q8NCU4 936 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 LINS1Q8NG48 757 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 MYD88Q99836 296 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 BRIP1Q9BX63 1249 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 NOB1Q9ULX3 412 aaKnown RBP10.43□□□□□ -0.74
SND1-202ENST00000461056 TNNQ9UQP3 1299 aa10.43□□□□□ -0.74
SND1-202ENST00000461056 COL11A2P13942 1736 aaPredicted RBP10.43□□□□□ -0.74
SND1-202ENST00000461056 SNED1Q8TER0 1413 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 UTYO14607 1347 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 KIF16BQ96L93 1317 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 H7C1W4 665 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 PCCAP05165 728 aaPredicted RBP10.42□□□□□ -0.74
SND1-202ENST00000461056 DPEP1P16444 411 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 TGFB2P61812 414 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 GCKRQ14397 625 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 CWF19L2Q2TBE0 894 aaKnown RBP10.42□□□□□ -0.74
SND1-202ENST00000461056 NUTM1Q86Y26 1132 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 CCDC24Q8N4L8 307 aa10.42□□□□□ -0.74
SND1-202ENST00000461056 UTP14AQ9BVJ6 771 aaKnown RBP10.42□□□□□ -0.74
SND1-202ENST00000461056 COL4A1P02462 1669 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 CDHR2Q9BYE9 1310 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 SRGNP10124 158 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 TRIM27P14373 513 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 HOXA10P31260 410 aaPredicted RBP10.41□□□□□ -0.74
SND1-202ENST00000461056 TPTE2Q6XPS3 522 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 ZBTB38Q8NAP3 1195 aaPredicted RBP10.41□□□□□ -0.74
SND1-202ENST00000461056 YTHDC1Q96MU7 727 aaKnown RBP10.41□□□□□ -0.74
SND1-202ENST00000461056 NYXQ9GZU5 481 aa10.41□□□□□ -0.74
SND1-202ENST00000461056 CWC25Q9NXE8 425 aaPredicted RBP10.41□□□□□ -0.74
SND1-202ENST00000461056 SH3TC1Q8TE82 1336 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 N4BP2Q86UW6 1770 aaPredicted RBP10.4□□□□□ -0.74
SND1-202ENST00000461056 A0A0G2JLW4 131 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 ALDH1L1O75891 902 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 CHRNA5P30532 468 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 PPP1R42Q7Z4L9 355 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 FAM89AQ96GI7 184 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
SND1-202ENST00000461056 PPP1R1BQ9UD71 204 aaPredicted RBP10.4□□□□□ -0.74
SND1-202ENST00000461056 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 RLBP1P12271 317 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 HCLS1P14317 486 aaPredicted RBP10.39□□□□□ -0.75
SND1-202ENST00000461056 INTS3Q68E01 1043 aaKnown RBP10.39□□□□□ -0.75
SND1-202ENST00000461056 ATF7IPQ6VMQ6 1270 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 SLC51AQ86UW1 340 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 PLA2G12BQ9BX93 195 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 API5Q9BZZ5 524 aaKnown RBP10.39□□□□□ -0.75
SND1-202ENST00000461056 TRMT112Q9UI30 125 aaKnown RBP10.39□□□□□ -0.75
SND1-202ENST00000461056 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
SND1-202ENST00000461056 DDX60Q8IY21 1712 aaKnown RBP10.38□□□□□ -0.75
SND1-202ENST00000461056 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
SND1-202ENST00000461056 FAM177BA6PVY3 158 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 YBX3P16989 372 aaKnown RBP eCLIP10.38□□□□□ -0.754e-12■■□□□ 14.5
SND1-202ENST00000461056 PDE6BP35913 854 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 ST5P78524 1137 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 SF3B3Q15393 1217 aaKnown RBP10.38□□□□□ -0.75
SND1-202ENST00000461056 STYK1Q6J9G0 422 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 C2CD5Q86YS7 1000 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 USP44Q9H0E7 712 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 PDZRN3Q9UPQ7 1066 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 LAMB2P55268 1798 aa10.38□□□□□ -0.75
SND1-202ENST00000461056 GRM8O00222 908 aa10.37□□□□□ -0.75
SND1-202ENST00000461056 IRS4O14654 1257 aaPredicted RBP10.37□□□□□ -0.75
SND1-202ENST00000461056 NEXNQ0ZGT2 675 aa10.37□□□□□ -0.75
SND1-202ENST00000461056 EPHA10Q5JZY3 1008 aa10.37□□□□□ -0.75
SND1-202ENST00000461056 POTEHQ6S545 545 aa10.37□□□□□ -0.75
SND1-202ENST00000461056 JARID2Q92833 1246 aaPredicted RBP10.37□□□□□ -0.75
SND1-202ENST00000461056 SRCIN1Q9C0H9 1055 aa10.37□□□□□ -0.75
SND1-202ENST00000461056 CSF1RP07333 972 aa10.36□□□□□ -0.75
SND1-202ENST00000461056 NBPF7P0C2Y1 421 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms