RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.51□□□□□ -0.25
DDX39B-214ENST00000458640 CACNA1FO60840 1977 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 ADCY5O95622 1261 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 NOM1Q5C9Z4 860 aaKnown RBP13.5□□□□□ -0.25
DDX39B-214ENST00000458640 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 TNNQ9UQP3 1299 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 PTPRCP08575 1304 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 MEGF6O75095 1541 aa13.5□□□□□ -0.25
DDX39B-214ENST00000458640 SATB1Q01826 763 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 TTC12Q9H892 705 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-214ENST00000458640 MIS18AQ9NYP9 233 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
DDX39B-214ENST00000458640 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 SIPA1L3O60292 1781 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-214ENST00000458640 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
DDX39B-214ENST00000458640 CCDC112Q8NEF3 446 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 STK31Q9BXU1 1019 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 SCN11AQ9UI33 1791 aa13.49□□□□□ -0.25
DDX39B-214ENST00000458640 V9GYY5 206 aaPredicted RBP13.49□□□□□ -0.25
DDX39B-214ENST00000458640 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
DDX39B-214ENST00000458640 ABCC4O15439 1325 aa13.48□□□□□ -0.25
DDX39B-214ENST00000458640 RNMTO43148 476 aaKnown RBP13.48□□□□□ -0.25
DDX39B-214ENST00000458640 GPS2Q13227 327 aa13.48□□□□□ -0.25
DDX39B-214ENST00000458640 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
DDX39B-214ENST00000458640 TMEM57Q8N5G2 664 aa13.48□□□□□ -0.25
DDX39B-214ENST00000458640 DONSONQ9NYP3 566 aa13.48□□□□□ -0.25
DDX39B-214ENST00000458640 KDM4AO75164 1064 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 TPM4P67936 248 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 CCDC30Q5VVM6 783 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 TOM1L2Q6ZVM7 507 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 RNF214Q8ND24 703 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 HOXB7P09629 217 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
DDX39B-214ENST00000458640 CD2BP2O95400 341 aaKnown RBP13.46□□□□□ -0.25
DDX39B-214ENST00000458640 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
DDX39B-214ENST00000458640 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.26
DDX39B-214ENST00000458640 A0A1B0GUL7 405 aa13.46□□□□□ -0.26
DDX39B-214ENST00000458640 BTBD11A6QL63 1104 aa13.46□□□□□ -0.26
DDX39B-214ENST00000458640 TOM1O60784 492 aa13.46□□□□□ -0.26
DDX39B-214ENST00000458640 NUCB1Q02818 461 aa13.46□□□□□ -0.26
DDX39B-214ENST00000458640 CCDC91Q7Z6B0 441 aa13.46□□□□□ -0.26
DDX39B-214ENST00000458640 LGR6Q9HBX8 967 aa13.46□□□□□ -0.26
DDX39B-214ENST00000458640 EVA1CP58658 441 aa13.45□□□□□ -0.26
DDX39B-214ENST00000458640 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
DDX39B-214ENST00000458640 RAI14Q9P0K7 980 aa13.45□□□□□ -0.26
DDX39B-214ENST00000458640 MRC1P22897 1456 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 PATL2C9JE40 543 aaKnown RBP13.44□□□□□ -0.26
DDX39B-214ENST00000458640 MYO1CO00159 1063 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 ATP8B1O43520 1251 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 PHKG2P15735 406 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 EGFL6Q8IUX8 553 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 ERO1AQ96HE7 468 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 MED4Q9NPJ6 270 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 RBM28Q9NW13 759 aaKnown RBP13.44□□□□□ -0.26
DDX39B-214ENST00000458640 PCDH11XQ9BZA7 1347 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 PCDH11YQ9BZA8 1340 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 DEF6Q9H4E7 631 aa13.44□□□□□ -0.26
DDX39B-214ENST00000458640 ST18O60284 1047 aa13.43□□□□□ -0.26
DDX39B-214ENST00000458640 CALRP27797 417 aaKnown RBP13.43□□□□□ -0.26
DDX39B-214ENST00000458640 KMT5BQ4FZB7 885 aa13.43□□□□□ -0.26
DDX39B-214ENST00000458640 IQUBQ8NA54 791 aa13.43□□□□□ -0.26
DDX39B-214ENST00000458640 DCAF5Q96JK2 942 aa13.43□□□□□ -0.26
DDX39B-214ENST00000458640 ZBTB40Q9NUA8 1239 aa13.43□□□□□ -0.26
DDX39B-214ENST00000458640 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
DDX39B-214ENST00000458640 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.43□□□□□ -0.26
DDX39B-214ENST00000458640 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-214ENST00000458640 AK9Q5TCS8 1911 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 GSCP56915 257 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-214ENST00000458640 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
DDX39B-214ENST00000458640 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
DDX39B-214ENST00000458640 HDGFL1Q5TGJ6 251 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 SUGP1Q8IWZ8 645 aaKnown RBP13.42□□□□□ -0.26
DDX39B-214ENST00000458640 RGS12O14924 1447 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-214ENST00000458640 IL2RBP14784 551 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 TRDNQ13061 729 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 CCDC183Q5T5S1 534 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 STRN4Q9NRL3 753 aa13.42□□□□□ -0.26
DDX39B-214ENST00000458640 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
DDX39B-214ENST00000458640 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-214ENST00000458640 CT47A1Q5JQC4 288 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-214ENST00000458640 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
DDX39B-214ENST00000458640 SLC52A2Q9HAB3 445 aa13.41□□□□□ -0.26
DDX39B-214ENST00000458640 PSD3Q9NYI0 1048 aa13.41□□□□□ -0.26
DDX39B-214ENST00000458640 PXDNLA1KZ92 1463 aa13.41□□□□□ -0.26
DDX39B-214ENST00000458640 TNNT1P13805 278 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 ATP2B1P20020 1258 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 KCNA4P22459 653 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-214ENST00000458640 GOLGA5Q8TBA6 731 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 ATG3Q9NT62 314 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 PYCARDQ9ULZ3 195 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
DDX39B-214ENST00000458640 KIF2AO00139 706 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms