RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 RDH13Q8NBN7 331 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 SPG7Q9UQ90 795 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 QSER1Q2KHR3 1735 aa11.31□□□□□ -0.6
LINC01888-202ENST00000457602 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
LINC01888-202ENST00000457602 CD46P15529 392 aa11.3□□□□□ -0.6
LINC01888-202ENST00000457602 HMGB2P26583 209 aaKnown RBP11.3□□□□□ -0.6
LINC01888-202ENST00000457602 GCGRP47871 477 aa11.3□□□□□ -0.6
LINC01888-202ENST00000457602 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
LINC01888-202ENST00000457602 ZNF784Q8NCA9 323 aaPredicted RBP11.3□□□□□ -0.6
LINC01888-202ENST00000457602 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
LINC01888-202ENST00000457602 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
LINC01888-202ENST00000457602 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
LINC01888-202ENST00000457602 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
LINC01888-202ENST00000457602 TUBGCP6Q96RT7 1819 aa11.29□□□□□ -0.6
LINC01888-202ENST00000457602 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01888-202ENST00000457602 NLGN2Q8NFZ4 835 aa11.28□□□□□ -0.6
LINC01888-202ENST00000457602 AK7Q96M32 723 aa11.28□□□□□ -0.6
LINC01888-202ENST00000457602 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
LINC01888-202ENST00000457602 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
LINC01888-202ENST00000457602 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.61
LINC01888-202ENST00000457602 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
LINC01888-202ENST00000457602 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
LINC01888-202ENST00000457602 PIGBQ92521 554 aa11.27□□□□□ -0.61
LINC01888-202ENST00000457602 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
LINC01888-202ENST00000457602 GPCPD1Q9NPB8 672 aa11.27□□□□□ -0.61
LINC01888-202ENST00000457602 TMOD3Q9NYL9 352 aa11.27□□□□□ -0.61
LINC01888-202ENST00000457602 TLL1O43897 1013 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 CLCN1P35523 988 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 EIF4A2Q14240 407 aaKnown RBP11.26□□□□□ -0.61
LINC01888-202ENST00000457602 AMHR2Q16671 573 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 PANK3Q9H999 370 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 C5P01031 1676 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 PKD1L3Q7Z443 1732 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
LINC01888-202ENST00000457602 MAP2P11137 1827 aaKnown RBP11.25□□□□□ -0.61
LINC01888-202ENST00000457602 PHKG2P15735 406 aa11.25□□□□□ -0.61
LINC01888-202ENST00000457602 FUT2Q10981 343 aa11.25□□□□□ -0.61
LINC01888-202ENST00000457602 PUS10Q3MIT2 529 aaKnown RBP11.25□□□□□ -0.61
LINC01888-202ENST00000457602 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
LINC01888-202ENST00000457602 COL24A1Q17RW2 1714 aa11.25□□□□□ -0.61
LINC01888-202ENST00000457602 ANKRD26Q9UPS8 1709 aa11.25□□□□□ -0.61
LINC01888-202ENST00000457602 TOGARAM1Q9Y4F4 1720 aa11.25□□□□□ -0.61
LINC01888-202ENST00000457602 ITGB4P16144 1822 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 SIK1P57059 783 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 MORN1Q5T089 497 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 CHD4Q14839 1912 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 UTRNP46939 3433 aa11.24□□□□□ -0.61
LINC01888-202ENST00000457602 C4BP0C0L5 1744 aa11.23□□□□□ -0.61
LINC01888-202ENST00000457602 GRIN3BO60391 1043 aa11.23□□□□□ -0.61
LINC01888-202ENST00000457602 NR1I2O75469 434 aa11.23□□□□□ -0.61
LINC01888-202ENST00000457602 ATP6V1AP38606 617 aa11.23□□□□□ -0.61
LINC01888-202ENST00000457602 SMIM5Q71RC9 77 aa11.23□□□□□ -0.61
LINC01888-202ENST00000457602 ASAP1Q9ULH1 1129 aa11.23□□□□□ -0.61
LINC01888-202ENST00000457602 MORC1Q86VD1 984 aa11.22□□□□□ -0.61
LINC01888-202ENST00000457602 AMIGO3Q86WK7 504 aa11.22□□□□□ -0.61
LINC01888-202ENST00000457602 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
LINC01888-202ENST00000457602 TAF1LQ8IZX4 1826 aa11.22□□□□□ -0.61
LINC01888-202ENST00000457602 LINC00116Q8NCU8 138 aa11.22□□□□□ -0.61
LINC01888-202ENST00000457602 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
LINC01888-202ENST00000457602 YBX3P16989 372 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC01888-202ENST00000457602 SSFA2P28290 1259 aa11.21□□□□□ -0.61
LINC01888-202ENST00000457602 PLEKHO1Q53GL0 409 aaPredicted RBP11.21□□□□□ -0.61
LINC01888-202ENST00000457602 ATG3Q9NT62 314 aa11.21□□□□□ -0.61
LINC01888-202ENST00000457602 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
LINC01888-202ENST00000457602 TRIM66O15016 1216 aa11.2□□□□□ -0.62
LINC01888-202ENST00000457602 HSP90AB1P08238 724 aaKnown RBP11.2□□□□□ -0.62
LINC01888-202ENST00000457602 ITPK1Q13572 414 aa11.2□□□□□ -0.62
LINC01888-202ENST00000457602 ZNF530Q6P9A1 599 aaPredicted RBP11.2□□□□□ -0.62
LINC01888-202ENST00000457602 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
LINC01888-202ENST00000457602 SENP3-EIF4A1A0A087X0R7 540 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
LINC01888-202ENST00000457602 ADH1BP00325 375 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 C1orf141Q5JVX7 400 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 THAP11Q96EK4 314 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 DCAF5Q96JK2 942 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 WWC3Q9ULE0 1092 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
LINC01888-202ENST00000457602 ERVV-2B6SEH9 535 aa11.18□□□□□ -0.62
LINC01888-202ENST00000457602 CABP4P57796 275 aa11.18□□□□□ -0.62
LINC01888-202ENST00000457602 AMOTQ4VCS5 1084 aa11.18□□□□□ -0.62
LINC01888-202ENST00000457602 SULT6B1Q6IMI4 303 aa11.18□□□□□ -0.62
LINC01888-202ENST00000457602 SLC27A5Q9Y2P5 690 aa11.18□□□□□ -0.62
LINC01888-202ENST00000457602 UBR3Q6ZT12 1888 aa11.18□□□□□ -0.62
LINC01888-202ENST00000457602 PLEKHG2Q9H7P9 1386 aa11.17□□□□□ -0.62
LINC01888-202ENST00000457602 KDM4AO75164 1064 aa11.17□□□□□ -0.62
LINC01888-202ENST00000457602 MTHFSP49914 203 aa11.17□□□□□ -0.62
LINC01888-202ENST00000457602 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
LINC01888-202ENST00000457602 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
LINC01888-202ENST00000457602 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
LINC01888-202ENST00000457602 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
LINC01888-202ENST00000457602 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
LINC01888-202ENST00000457602 GIGYF2Q6Y7W6 1299 aaKnown RBP11.16□□□□□ -0.62
LINC01888-202ENST00000457602 SLC24A3Q9HC58 644 aa11.16□□□□□ -0.62
LINC01888-202ENST00000457602 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
LINC01888-202ENST00000457602 MMP10P09238 476 aa11.15□□□□□ -0.62
LINC01888-202ENST00000457602 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms