RNA–Protein interactions for RNA: ENST00000457023.1

CAPN7-205, Transcript of calpain 7, humanhuman

TSL 3

Gene CAPN7, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-205ENST00000457023 PARP10Q53GL7 1025 aa33.06■■■□□ 2.88
CAPN7-205ENST00000457023 PPP1R42Q7Z4L9 355 aa33.06■■■□□ 2.88
CAPN7-205ENST00000457023 RPGRQ92834 1020 aaKnown RBP33.06■■■□□ 2.88
CAPN7-205ENST00000457023 PROSER3Q2NL68 480 aa33.05■■■□□ 2.88
CAPN7-205ENST00000457023 CRAMP1Q96RY5 1269 aa33.05■■■□□ 2.88
CAPN7-205ENST00000457023 TAF1DQ9H5J8 278 aaPredicted RBP33.05■■■□□ 2.88
CAPN7-205ENST00000457023 ZNF541Q9H0D2 1346 aa33.04■■■□□ 2.88
CAPN7-205ENST00000457023 CHL1O00533 1208 aa33.03■■■□□ 2.88
CAPN7-205ENST00000457023 GRIPAP1Q4V328 841 aa33.03■■■□□ 2.88
CAPN7-205ENST00000457023 SLC10A5Q5PT55 438 aa33.03■■■□□ 2.88
CAPN7-205ENST00000457023 RBM17Q96I25 401 aaKnown RBP33.03■■■□□ 2.88
CAPN7-205ENST00000457023 CCDC146Q8IYE0 955 aa33.02■■■□□ 2.88
CAPN7-205ENST00000457023 RUNDC1Q96C34 613 aa33.02■■■□□ 2.88
CAPN7-205ENST00000457023 TRIM35Q9UPQ4 493 aa33.02■■■□□ 2.88
CAPN7-205ENST00000457023 ANXA1P04083 346 aa33.01■■■□□ 2.87
CAPN7-205ENST00000457023 C3orf67Q6ZVT6 689 aa33.01■■■□□ 2.87
CAPN7-205ENST00000457023 LDHDQ86WU2 507 aa33.01■■■□□ 2.87
CAPN7-205ENST00000457023 NEUROD2Q15784 382 aa33■■■□□ 2.87
CAPN7-205ENST00000457023 UTP14AQ9BVJ6 771 aaKnown RBP33■■■□□ 2.87
CAPN7-205ENST00000457023 COPS6Q7L5N1 327 aa32.99■■■□□ 2.87
CAPN7-205ENST00000457023 NLRP3Q96P20 1036 aa32.99■■■□□ 2.87
CAPN7-205ENST00000457023 CREBZFQ9NS37 354 aa32.99■■■□□ 2.87
CAPN7-205ENST00000457023 HACL1Q9UJ83 578 aa32.98■■■□□ 2.87
CAPN7-205ENST00000457023 SCN4AP35499 1836 aa32.98■■■□□ 2.87
CAPN7-205ENST00000457023 GPC2Q8N158 579 aa32.97■■■□□ 2.87
CAPN7-205ENST00000457023 JDP2Q8WYK2 163 aa32.97■■■□□ 2.87
CAPN7-205ENST00000457023 ADAMTS8Q9UP79 889 aa32.97■■■□□ 2.87
CAPN7-205ENST00000457023 NECTIN2Q92692 538 aa32.96■■■□□ 2.87
CAPN7-205ENST00000457023 DDX21Q9NR30 783 aaKnown RBP eCLIP32.96■■■□□ 2.87
CAPN7-205ENST00000457023 PASKQ96RG2 1323 aa32.96■■■□□ 2.87
CAPN7-205ENST00000457023 PPEF1O14829 653 aaPredicted RBP32.95■■■□□ 2.87
CAPN7-205ENST00000457023 WDR43Q15061 677 aaKnown RBP eCLIP32.95■■■□□ 2.87
CAPN7-205ENST00000457023 KRT24Q2M2I5 525 aa32.95■■■□□ 2.87
CAPN7-205ENST00000457023 HSP90AB3PQ58FF7 597 aa32.95■■■□□ 2.87
CAPN7-205ENST00000457023 XAGE3Q8WTP9 111 aa32.95■■■□□ 2.87
CAPN7-205ENST00000457023 RNF123Q5XPI4 1314 aa32.95■■■□□ 2.86
CAPN7-205ENST00000457023 EPHX2P34913 555 aa32.94■■■□□ 2.86
CAPN7-205ENST00000457023 ITGBL1O95965 494 aaPredicted RBP32.93■■■□□ 2.86
CAPN7-205ENST00000457023 AIMP1Q12904 312 aaKnown RBP32.93■■■□□ 2.86
CAPN7-205ENST00000457023 TCIRG1Q13488 830 aa32.93■■■□□ 2.86
CAPN7-205ENST00000457023 NLRP10Q86W26 655 aa32.93■■■□□ 2.86
CAPN7-205ENST00000457023 COL13A1Q5TAT6 717 aaPredicted RBP32.92■■■□□ 2.86
CAPN7-205ENST00000457023 SLC51AQ86UW1 340 aa32.92■■■□□ 2.86
CAPN7-205ENST00000457023 PNMA8AQ86V59 439 aaPredicted RBP32.92■■■□□ 2.86
CAPN7-205ENST00000457023 TCERG1O14776 1098 aaKnown RBP32.91■■■□□ 2.86
CAPN7-205ENST00000457023 EAPPQ56P03 285 aaPredicted RBP32.91■■■□□ 2.86
CAPN7-205ENST00000457023 ATP6V0A2Q9Y487 856 aa32.91■■■□□ 2.86
CAPN7-205ENST00000457023 LAS1LQ9Y4W2 734 aaKnown RBP32.91■■■□□ 2.86
CAPN7-205ENST00000457023 COL4A5P29400 1685 aa32.91■■■□□ 2.86
CAPN7-205ENST00000457023 EIF6P56537 245 aaKnown RBP32.9■■■□□ 2.86
CAPN7-205ENST00000457023 VPS33BQ9H267 617 aa32.89■■■□□ 2.86
CAPN7-205ENST00000457023 HOXB7P09629 217 aa32.88■■■□□ 2.85
CAPN7-205ENST00000457023 LARGE2Q8N3Y3 721 aa32.88■■■□□ 2.85
CAPN7-205ENST00000457023 PRKRIP1Q9H875 184 aaPredicted RBP32.88■■■□□ 2.85
CAPN7-205ENST00000457023 ABCC4O15439 1325 aa32.87■■■□□ 2.85
CAPN7-205ENST00000457023 BBOX1O75936 387 aa32.87■■■□□ 2.85
CAPN7-205ENST00000457023 CFAP44Q96MT7 982 aa32.87■■■□□ 2.85
CAPN7-205ENST00000457023 CHPF2Q9P2E5 772 aa32.87■■■□□ 2.85
CAPN7-205ENST00000457023 CLEC11AQ9Y240 323 aa32.87■■■□□ 2.85
CAPN7-205ENST00000457023 PCNTO95613 3336 aa32.87■■■□□ 2.85
CAPN7-205ENST00000457023 ADAMTSL1Q8N6G6 1762 aa32.86■■■□□ 2.85
CAPN7-205ENST00000457023 HSPA1AP0DMV8 641 aaKnown RBP32.86■■■□□ 2.85
CAPN7-205ENST00000457023 HSPA1BP0DMV9 641 aaKnown RBP32.86■■■□□ 2.85
CAPN7-205ENST00000457023 TMX4Q9H1E5 349 aaPredicted RBP32.86■■■□□ 2.85
CAPN7-205ENST00000457023 TRMT112Q9UI30 125 aaKnown RBP32.86■■■□□ 2.85
CAPN7-205ENST00000457023 HCLS1P14317 486 aaPredicted RBP32.85■■■□□ 2.85
CAPN7-205ENST00000457023 RTFDC1Q9BY42 306 aaPredicted RBP32.85■■■□□ 2.85
CAPN7-205ENST00000457023 MKRN1Q9UHC7 482 aaKnown RBP32.85■■■□□ 2.85
CAPN7-205ENST00000457023 GJA3Q9Y6H8 435 aa32.85■■■□□ 2.85
CAPN7-205ENST00000457023 HDGFL1Q5TGJ6 251 aa32.84■■■□□ 2.85
CAPN7-205ENST00000457023 SP8Q8IXZ3 490 aa32.84■■■□□ 2.85
CAPN7-205ENST00000457023 PLBD2Q8NHP8 589 aa32.84■■■□□ 2.85
CAPN7-205ENST00000457023 SH3TC1Q8TE82 1336 aa32.83■■■□□ 2.85
CAPN7-205ENST00000457023 TMEM88BA6NKF7 163 aa32.83■■■□□ 2.85
CAPN7-205ENST00000457023 ANKRD13DQ6ZTN6 518 aa32.83■■■□□ 2.85
CAPN7-205ENST00000457023 CNTROBQ8N137 903 aa32.83■■■□□ 2.85
CAPN7-205ENST00000457023 DBF4Q9UBU7 674 aaPredicted RBP32.83■■■□□ 2.85
CAPN7-205ENST00000457023 CNTNAP1P78357 1384 aa32.82■■■□□ 2.84
CAPN7-205ENST00000457023 PPIP5K2O43314 1243 aa32.81■■■□□ 2.84
CAPN7-205ENST00000457023 ZNF853P0CG23 659 aa32.81■■■□□ 2.84
CAPN7-205ENST00000457023 SCNN1DP51172 638 aa32.81■■■□□ 2.84
CAPN7-205ENST00000457023 MAP1SQ66K74 1059 aaPredicted RBP32.81■■■□□ 2.84
CAPN7-205ENST00000457023 NIM1KQ8IY84 436 aa32.81■■■□□ 2.84
CAPN7-205ENST00000457023 AOC3Q16853 763 aa32.8■■■□□ 2.84
CAPN7-205ENST00000457023 SUPT20HQ8NEM7 779 aa32.8■■■□□ 2.84
CAPN7-205ENST00000457023 ANKRD36CQ5JPF3 1778 aa32.8■■■□□ 2.84
CAPN7-205ENST00000457023 LMOD1P29536 600 aaPredicted RBP32.79■■■□□ 2.84
CAPN7-205ENST00000457023 DUSP27Q5VZP5 1158 aa32.79■■■□□ 2.84
CAPN7-205ENST00000457023 DDX46Q7L014 1031 aaKnown RBP32.79■■■□□ 2.84
CAPN7-205ENST00000457023 ISCA1Q9BUE6 129 aa32.79■■■□□ 2.84
CAPN7-205ENST00000457023 MBIPQ9NS73 344 aa32.79■■■□□ 2.84
CAPN7-205ENST00000457023 EPS15P42566 896 aa32.78■■■□□ 2.84
CAPN7-205ENST00000457023 GRAPQ13588 217 aa32.78■■■□□ 2.84
CAPN7-205ENST00000457023 GRAPLQ8TC17 118 aaPredicted RBP32.78■■■□□ 2.84
CAPN7-205ENST00000457023 HYPKQ9NX55 129 aa32.78■■■□□ 2.84
CAPN7-205ENST00000457023 DPP8Q6V1X1 898 aaPredicted RBP32.77■■■□□ 2.84
CAPN7-205ENST00000457023 MPNDQ8N594 471 aa32.76■■■□□ 2.83
CAPN7-205ENST00000457023 ZNRF3Q9ULT6 936 aa32.76■■■□□ 2.83
CAPN7-205ENST00000457023 LTBP1Q14766 1721 aa32.76■■■□□ 2.83
CAPN7-205ENST00000457023 USP50Q70EL3 339 aaPredicted RBP32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms