RNA–Protein interactions for RNA: ENST00000453944.1

DDX59-208, Transcript of DEAD-box helicase 59, human

TSL 3

Gene DDX59, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX59-208	ENST00000453944	PRR20D	P86480	221 aa		6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	PRR20B	P86481	221 aa		6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	PRR20A	P86496	221 aa		6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	LYSMD3	Q7Z3D4	306 aa		6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	NEUROD4	Q9HD90	331 aa		6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	RTCB	Q9Y3I0	505 aa	Known RBP	6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	SHROOM4	Q9ULL8	1493 aa		6.26	□□□□□ -1.41
DDX59-208	ENST00000453944	CTSH	P09668	335 aa		6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	GRN	P28799	593 aa	Known RBP	6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	GNA15	P30679	374 aa		6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	IRS1	P35568	1242 aa		6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	TRIP4	Q15650	581 aa	Predicted RBP	6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	NAALADL2	Q58DX5	795 aa		6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	BTLA	Q7Z6A9	289 aa		6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	METTL16	Q86W50	562 aa	Known RBP	6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	EPS8L3	Q8TE67	593 aa	Known RBP	6.25	□□□□□ -1.41
DDX59-208	ENST00000453944	TIMMDC1	Q9NPL8	285 aa		6.25	□□□□□ -1.41
DDX59-208	ENST00000453944		A0A1W2PNR3	127 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	UBAP1L	F5GYI3	381 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	TNFRSF21	O75509	655 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	POLR3D	P05423	398 aa	Predicted RBP	6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	ZC3H6	P61129	1189 aa	Known RBP	6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	FGD1	P98174	961 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	FANCC	Q00597	558 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	RAD51AP2	Q09MP3	1159 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	MRPL14	Q6P1L8	145 aa	Known RBP	6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	NT5DC4	Q86YG4	428 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	FAM13B	Q9NYF5	915 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	TMEM63C	Q9P1W3	806 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	ANKIB1	Q9P2G1	1089 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	PPP1R1B	Q9UD71	204 aa	Predicted RBP	6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	KCNMB2	Q9Y691	235 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	AK5	Q9Y6K8	562 aa		6.24	□□□□□ -1.41
DDX59-208	ENST00000453944	TTLL8	A6PVC2	850 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	CPNE3	O75131	537 aa	Known RBP	6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	BMP1	P13497	986 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	ARSD	P51689	593 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	IER5	Q5VY09	327 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	ZNF438	Q7Z4V0	828 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	C8orf37	Q96NL8	207 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	OSBPL7	Q9BZF2	842 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	ELP3	Q9H9T3	547 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	ZFYVE28	Q9HCC9	887 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	GPAM	Q9HCL2	828 aa		6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	6.23	□□□□□ -1.41
DDX59-208	ENST00000453944	RPLP1	P05386	114 aa	Known RBP	6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	NEFL	P07196	543 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	HIF1A	Q16665	826 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	XKR5	Q6UX68	686 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	RNF34	Q969K3	372 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	CCDC74A	Q96AQ1	378 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	CEP63	Q96MT8	703 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	DNAJC25	Q9H1X3	360 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	RUBCNL	Q9H714	662 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	CNTN3	Q9P232	1028 aa		6.22	□□□□□ -1.41
DDX59-208	ENST00000453944	WDR44	Q5JSH3	913 aa		6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	TRIM46	Q7Z4K8	759 aa		6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	C1orf127	Q8N9H9	656 aa		6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	FBF1	Q8TES7	1133 aa		6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	DRC1	Q96MC2	740 aa		6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	PDZRN3	Q9UPQ7	1066 aa		6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.21	□□□□□ -1.42
DDX59-208	ENST00000453944	SOS2	Q07890	1332 aa	Predicted RBP	6.21	□□□□□ -1.42
DDX59-208	ENST00000453944		A0A1B0GTH6	734 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	FAM187A	A6NFU0	413 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	PHACTR2	O75167	634 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	XYLB	O75191	536 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	EIF4B	P23588	611 aa	Known RBP	6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	ZNF76	P36508	570 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	TYRO3	Q06418	890 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	GAS2L1	Q99501	681 aa	Predicted RBP	6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	CHRD	Q9H2X0	955 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	ACBD3	Q9H3P7	528 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	SPG7	Q9UQ90	795 aa		6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	GPC6	Q9Y625	555 aa	Predicted RBP	6.2	□□□□□ -1.42
DDX59-208	ENST00000453944	EREG	O14944	169 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	TNNI2	P48788	182 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	SCARF1	Q14162	830 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	PDE12	Q6L8Q7	609 aa	Known RBP	6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	NXPE4	Q6UWF7	544 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	SREK1	Q8WXA9	508 aa	Known RBP	6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	ZFP42	Q96MM3	310 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	NPHS2	Q9NP85	383 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	GJA3	Q9Y6H8	435 aa		6.19	□□□□□ -1.42
DDX59-208	ENST00000453944	SASH3	O75995	380 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	CYP2E1	P05181	493 aa	Predicted RBP	6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	SFSWAP	Q12872	951 aa	Known RBP	6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	ZNF394	Q53GI3	561 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	MEI1	Q5TIA1	1274 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	SNX29	Q8TEQ0	813 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	FRMD6	Q96NE9	622 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	C12orf49	Q9H741	205 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	METTL5	Q9NRN9	209 aa	Known RBP	6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	NLRP2	Q9NX02	1062 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	DNMT3L	Q9UJW3	386 aa		6.18	□□□□□ -1.42
DDX59-208	ENST00000453944	SOBP	A7XYQ1	873 aa		6.17	□□□□□ -1.42
DDX59-208	ENST00000453944	F11	P03951	625 aa		6.17	□□□□□ -1.42
DDX59-208	ENST00000453944	TARS	P26639	723 aa	Known RBP	6.17	□□□□□ -1.42

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