RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CCDC87Q9NVE4 849 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 HCN4Q9Y3Q4 1203 aa6.24□□□□□ -1.41
HMGB1P15-201ENST00000453854 IRS1P35568 1242 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 FMR1Q06787 632 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 TMEM214Q6NUQ4 689 aaKnown RBP6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 TMEM151AQ8N4L1 468 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 ACDQ96AP0 544 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 ALKBH8Q96BT7 664 aaKnown RBP6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 DMRTB1Q96MA1 342 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 PHACTR1Q9C0D0 580 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 GPAMQ9HCL2 828 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 PARP3Q9Y6F1 533 aa6.23□□□□□ -1.41
HMGB1P15-201ENST00000453854 H7C1W4 665 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 F11P03951 625 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 TXLNAP40222 546 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 TAGLNQ01995 201 aaKnown RBP6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 DGKZQ13574 1117 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 UBAP2LQ14157 1087 aaKnown RBP6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 C4orf17Q53FE4 359 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 EAPPQ56P03 285 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 GNASQ5JWF2 1037 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 IFT43Q96FT9 208 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 NGLY1Q96IV0 654 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 NUCKS1Q9H1E3 243 aaKnown RBP6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 KLK14Q9P0G3 267 aa6.22□□□□□ -1.41
HMGB1P15-201ENST00000453854 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 MZF1P28698 734 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 GTF2E1P29083 439 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 ATCAYQ86WG3 371 aa6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 GJD3Q8N144 294 aa6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 BCS1LQ9Y276 419 aa6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 GPC6Q9Y625 555 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P15-201ENST00000453854 USP5P45974 858 aa6.2□□□□□ -1.42
HMGB1P15-201ENST00000453854 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
HMGB1P15-201ENST00000453854 CNTNAP5Q8WYK1 1306 aa6.2□□□□□ -1.42
HMGB1P15-201ENST00000453854 RNF225M0QZC1 329 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 GPR182O15218 404 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 PDGFAP04085 211 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 ZAP70P43403 619 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 PLA2G4AP47712 749 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 PLCB3Q01970 1234 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 MAP3K10Q02779 954 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 EHHADHQ08426 723 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 AAMPQ13685 434 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 HIF1AQ16665 826 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 IER5Q5VY09 327 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 TRERF1Q96PN7 1200 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 RUBCNLQ9H714 662 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 DMGDHQ9UI17 866 aaKnown RBP6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 POLIQ9UNA4 740 aa6.19□□□□□ -1.42
HMGB1P15-201ENST00000453854 TGFBR3LH3BV60 316 aa6.18□□□□□ -1.42
HMGB1P15-201ENST00000453854 BCRP11274 1271 aa6.18□□□□□ -1.42
HMGB1P15-201ENST00000453854 MX2P20592 715 aa6.18□□□□□ -1.42
HMGB1P15-201ENST00000453854 MSX1P28360 303 aa6.18□□□□□ -1.42
HMGB1P15-201ENST00000453854 NBPF1Q3BBV0 1214 aa6.18□□□□□ -1.42
HMGB1P15-201ENST00000453854 TREML1Q86YW5 311 aa6.18□□□□□ -1.42
HMGB1P15-201ENST00000453854 LOC100996750A0A140TA64 210 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 A0A1B0GTH6 734 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 MICAL2O94851 1124 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 ATP4AP20648 1035 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 FGD1P98174 961 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 DNM1Q05193 864 aaKnown RBP6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 MRPL58Q14197 206 aaKnown RBP6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 C1orf229Q6ZS94 237 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 TMC1Q8TDI8 760 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 EDEM1Q92611 657 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 KLRG1Q96E93 195 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
HMGB1P15-201ENST00000453854 OPLAHO14841 1288 aa6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 ITGB2P05107 769 aa6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 SUZ12Q15022 739 aaKnown RBP6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 ENOX2Q16206 610 aaKnown RBP6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 RHPN1Q8TCX5 695 aa6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 SCARF2Q96GP6 870 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 SUSD3Q96L08 255 aa6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 FAM13BQ9NYF5 915 aa6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 HCN2Q9UL51 889 aa6.16□□□□□ -1.42
HMGB1P15-201ENST00000453854 SHISA8B8ZZ34 492 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 C2CD2LO14523 706 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 RECKO95980 971 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 RPLP1P05386 114 aaKnown RBP6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 LDHBP07195 334 aaKnown RBP6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 TATP17735 454 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 GPAT2Q6NUI2 795 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 KANK3Q6NY19 840 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 ZNF280CQ8ND82 737 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 GPR152Q8TDT2 470 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 NUDT16Q96DE0 195 aaKnown RBP6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 ABHD17AQ96GS6 310 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 ZIC5Q96T25 663 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 CFHR5Q9BXR6 569 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 NIF3L1Q9GZT8 377 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 ENAMQ9NRM1 1142 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 NDFIP2Q9NV92 336 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 ANKIB1Q9P2G1 1089 aa6.15□□□□□ -1.42
HMGB1P15-201ENST00000453854 OIP5O43482 229 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms