RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 GRIPAP1Q4V328 841 aa14.36□□□□□ -0.11
USP1-204ENST00000452143 COL13A1Q5TAT6 717 aaPredicted RBP14.36□□□□□ -0.11
USP1-204ENST00000452143 TAF1DQ9H5J8 278 aaPredicted RBP14.36□□□□□ -0.11
USP1-204ENST00000452143 ZNF277Q9NRM2 450 aaPredicted RBP14.36□□□□□ -0.11
USP1-204ENST00000452143 UBN2Q6ZU65 1347 aa14.36□□□□□ -0.11
USP1-204ENST00000452143 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
USP1-204ENST00000452143 FZD9O00144 591 aa14.35□□□□□ -0.11
USP1-204ENST00000452143 HSPA1AP0DMV8 641 aaKnown RBP14.35□□□□□ -0.11
USP1-204ENST00000452143 HSPA1BP0DMV9 641 aaKnown RBP14.35□□□□□ -0.11
USP1-204ENST00000452143 MYL6BP14649 208 aa14.35□□□□□ -0.11
USP1-204ENST00000452143 HOXA10P31260 410 aaPredicted RBP14.35□□□□□ -0.11
USP1-204ENST00000452143 NUTM1Q86Y26 1132 aa14.35□□□□□ -0.11
USP1-204ENST00000452143 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
USP1-204ENST00000452143 RPGRQ92834 1020 aaKnown RBP14.35□□□□□ -0.11
USP1-204ENST00000452143 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
USP1-204ENST00000452143 RRP7AQ9Y3A4 280 aaKnown RBP14.35□□□□□ -0.11
USP1-204ENST00000452143 PASKQ96RG2 1323 aa14.35□□□□□ -0.11
USP1-204ENST00000452143 OLFM4Q6UX06 510 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 GIGYF2Q6Y7W6 1299 aaKnown RBP14.34□□□□□ -0.11
USP1-204ENST00000452143 TTLL7Q6ZT98 887 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 GPC2Q8N158 579 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 ZBTB3Q9H5J0 574 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 BABAM1Q9NWV8 329 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 HACL1Q9UJ83 578 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 LAMB2P55268 1798 aa14.34□□□□□ -0.11
USP1-204ENST00000452143 GPTP24298 496 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 PARP10Q53GL7 1025 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.12
USP1-204ENST00000452143 ZNF34Q8IZ26 560 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 JDP2Q8WYK2 163 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 RNF123Q5XPI4 1314 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 CNTNAP1P78357 1384 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 COL4A5P29400 1685 aa14.33□□□□□ -0.12
USP1-204ENST00000452143 NTSR2O95665 410 aa14.32□□□□□ -0.12
USP1-204ENST00000452143 EPHX2P34913 555 aa14.32□□□□□ -0.12
USP1-204ENST00000452143 RALBP1Q15311 655 aa14.32□□□□□ -0.12
USP1-204ENST00000452143 PPP1R42Q7Z4L9 355 aa14.32□□□□□ -0.12
USP1-204ENST00000452143 CRAMP1Q96RY5 1269 aa14.32□□□□□ -0.12
USP1-204ENST00000452143 POLA2Q14181 598 aa14.31□□□□□ -0.12
USP1-204ENST00000452143 EAPPQ56P03 285 aaPredicted RBP14.31□□□□□ -0.12
USP1-204ENST00000452143 SUSD4Q5VX71 490 aa14.31□□□□□ -0.12
USP1-204ENST00000452143 LRP10Q7Z4F1 713 aa14.31□□□□□ -0.12
USP1-204ENST00000452143 TNS4Q8IZW8 715 aa14.31□□□□□ -0.12
USP1-204ENST00000452143 RBM17Q96I25 401 aaKnown RBP14.31□□□□□ -0.12
USP1-204ENST00000452143 LTBP1Q14766 1721 aa14.3□□□□□ -0.12
USP1-204ENST00000452143 PPEF1O14829 653 aaPredicted RBP14.3□□□□□ -0.12
USP1-204ENST00000452143 ITGBL1O95965 494 aaPredicted RBP14.3□□□□□ -0.12
USP1-204ENST00000452143 RIPK4P57078 832 aa14.3□□□□□ -0.12
USP1-204ENST00000452143 MKRN1Q9UHC7 482 aaKnown RBP14.3□□□□□ -0.12
USP1-204ENST00000452143 TMEM88BA6NKF7 163 aa14.29□□□□□ -0.12
USP1-204ENST00000452143 EIF6P56537 245 aaKnown RBP14.29□□□□□ -0.12
USP1-204ENST00000452143 PDIA6Q15084 440 aa14.29□□□□□ -0.12
USP1-204ENST00000452143 LRRC37AA6NMS7 1700 aa14.28□□□□□ -0.12
USP1-204ENST00000452143 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
USP1-204ENST00000452143 HSP90AB3PQ58FF7 597 aa14.28□□□□□ -0.12
USP1-204ENST00000452143 LARGE2Q8N3Y3 721 aa14.28□□□□□ -0.12
USP1-204ENST00000452143 NLRP3Q96P20 1036 aa14.28□□□□□ -0.12
USP1-204ENST00000452143 UTP14AQ9BVJ6 771 aaKnown RBP14.28□□□□□ -0.12
USP1-204ENST00000452143 THSD7BQ9C0I4 1608 aa14.28□□□□□ -0.12
USP1-204ENST00000452143 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
USP1-204ENST00000452143 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
USP1-204ENST00000452143 TRPM7Q96QT4 1865 aa14.27□□□□□ -0.12
USP1-204ENST00000452143 EIF2S2P20042 333 aaKnown RBP14.27□□□□□ -0.13
USP1-204ENST00000452143 LMOD1P29536 600 aaPredicted RBP14.27□□□□□ -0.13
USP1-204ENST00000452143 SLC10A5Q5PT55 438 aa14.27□□□□□ -0.13
USP1-204ENST00000452143 VPS33BQ9H267 617 aa14.27□□□□□ -0.13
USP1-204ENST00000452143 DDX60Q8IY21 1712 aaKnown RBP14.27□□□□□ -0.13
USP1-204ENST00000452143 ABCC4O15439 1325 aa14.26□□□□□ -0.13
USP1-204ENST00000452143 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
USP1-204ENST00000452143 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
USP1-204ENST00000452143 C3orf67Q6ZVT6 689 aa14.26□□□□□ -0.13
USP1-204ENST00000452143 CNTROBQ8N137 903 aa14.26□□□□□ -0.13
USP1-204ENST00000452143 ATP6V0A2Q9Y487 856 aa14.26□□□□□ -0.13
USP1-204ENST00000452143 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
USP1-204ENST00000452143 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
USP1-204ENST00000452143 SCNN1DP51172 638 aa14.25□□□□□ -0.13
USP1-204ENST00000452143 MAP1SQ66K74 1059 aaPredicted RBP14.25□□□□□ -0.13
USP1-204ENST00000452143 NIM1KQ8IY84 436 aa14.25□□□□□ -0.13
USP1-204ENST00000452143 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
USP1-204ENST00000452143 PPIP5K2O43314 1243 aa14.24□□□□□ -0.13
USP1-204ENST00000452143 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
USP1-204ENST00000452143 NLRP10Q86W26 655 aa14.24□□□□□ -0.13
USP1-204ENST00000452143 RTFDC1Q9BY42 306 aaPredicted RBP14.24□□□□□ -0.13
USP1-204ENST00000452143 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP1-204ENST00000452143 SH3TC1Q8TE82 1336 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 CDHR2Q9BYE9 1310 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 CHL1O00533 1208 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 BBOX1O75936 387 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 ANXA1P04083 346 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 HOXB7P09629 217 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 VEGFBP49765 207 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 COPS6Q7L5N1 327 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 AIDAQ96BJ3 306 aa14.23□□□□□ -0.13
USP1-204ENST00000452143 DUOX1Q9NRD9 1551 aa14.22□□□□□ -0.13
USP1-204ENST00000452143 TCERG1O14776 1098 aaKnown RBP14.22□□□□□ -0.13
USP1-204ENST00000452143 FOXN1O15353 648 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms