RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 BABAM1Q9NWV8 329 aa13.01□□□□□ -0.33
LINC01238-204ENST00000451070 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
LINC01238-204ENST00000451070 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
LINC01238-204ENST00000451070 ANKRD36CQ5JPF3 1778 aa13.01□□□□□ -0.33
LINC01238-204ENST00000451070 COL4A5P29400 1685 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 ANXA1P04083 346 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 HOXA10P31260 410 aaPredicted RBP13□□□□□ -0.33
LINC01238-204ENST00000451070 CHADLQ6NUI6 762 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 SLC51AQ86UW1 340 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 SYNE4Q8N205 404 aa13□□□□□ -0.33
LINC01238-204ENST00000451070 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
LINC01238-204ENST00000451070 LMOD3Q0VAK6 560 aa12.99□□□□□ -0.33
LINC01238-204ENST00000451070 PSMD1Q99460 953 aa12.99□□□□□ -0.33
LINC01238-204ENST00000451070 TAF1DQ9H5J8 278 aaPredicted RBP12.99□□□□□ -0.33
LINC01238-204ENST00000451070 LAMB2P55268 1798 aa12.99□□□□□ -0.33
LINC01238-204ENST00000451070 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
LINC01238-204ENST00000451070 IQCA1LA6NCM1 817 aa12.98□□□□□ -0.33
LINC01238-204ENST00000451070 FZD9O00144 591 aa12.98□□□□□ -0.33
LINC01238-204ENST00000451070 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
LINC01238-204ENST00000451070 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
LINC01238-204ENST00000451070 NECTIN2Q92692 538 aa12.98□□□□□ -0.33
LINC01238-204ENST00000451070 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
LINC01238-204ENST00000451070 TRIM35Q9UPQ4 493 aa12.98□□□□□ -0.33
LINC01238-204ENST00000451070 CHL1O00533 1208 aa12.97□□□□□ -0.33
LINC01238-204ENST00000451070 PARP10Q53GL7 1025 aa12.97□□□□□ -0.33
LINC01238-204ENST00000451070 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
LINC01238-204ENST00000451070 PPP1R42Q7Z4L9 355 aa12.97□□□□□ -0.33
LINC01238-204ENST00000451070 LDHDQ86WU2 507 aa12.97□□□□□ -0.33
LINC01238-204ENST00000451070 CRAMP1Q96RY5 1269 aa12.97□□□□□ -0.33
LINC01238-204ENST00000451070 PASKQ96RG2 1323 aa12.96□□□□□ -0.33
LINC01238-204ENST00000451070 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
LINC01238-204ENST00000451070 COPS6Q7L5N1 327 aa12.96□□□□□ -0.33
LINC01238-204ENST00000451070 XAGE3Q8WTP9 111 aa12.96□□□□□ -0.33
LINC01238-204ENST00000451070 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
LINC01238-204ENST00000451070 RBM17Q96I25 401 aaKnown RBP12.96□□□□□ -0.33
LINC01238-204ENST00000451070 LTBP1Q14766 1721 aa12.96□□□□□ -0.34
LINC01238-204ENST00000451070 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
LINC01238-204ENST00000451070 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
LINC01238-204ENST00000451070 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
LINC01238-204ENST00000451070 COL13A1Q5TAT6 717 aaPredicted RBP12.95□□□□□ -0.34
LINC01238-204ENST00000451070 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
LINC01238-204ENST00000451070 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC01238-204ENST00000451070 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
LINC01238-204ENST00000451070 HACL1Q9UJ83 578 aa12.95□□□□□ -0.34
LINC01238-204ENST00000451070 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
LINC01238-204ENST00000451070 TAF1P21675 1872 aa12.95□□□□□ -0.34
LINC01238-204ENST00000451070 TCERG1O14776 1098 aaKnown RBP12.94□□□□□ -0.34
LINC01238-204ENST00000451070 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
LINC01238-204ENST00000451070 EPHX2P34913 555 aa12.94□□□□□ -0.34
LINC01238-204ENST00000451070 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC01238-204ENST00000451070 NLRP10Q86W26 655 aa12.94□□□□□ -0.34
LINC01238-204ENST00000451070 GPC2Q8N158 579 aa12.94□□□□□ -0.34
LINC01238-204ENST00000451070 JDP2Q8WYK2 163 aa12.94□□□□□ -0.34
LINC01238-204ENST00000451070 NLRP3Q96P20 1036 aa12.94□□□□□ -0.34
LINC01238-204ENST00000451070 ABCC4O15439 1325 aa12.93□□□□□ -0.34
LINC01238-204ENST00000451070 HSPA1AP0DMV8 641 aaKnown RBP12.93□□□□□ -0.34
LINC01238-204ENST00000451070 HSPA1BP0DMV9 641 aaKnown RBP12.93□□□□□ -0.34
LINC01238-204ENST00000451070 TCIRG1Q13488 830 aa12.93□□□□□ -0.34
LINC01238-204ENST00000451070 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
LINC01238-204ENST00000451070 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
LINC01238-204ENST00000451070 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
LINC01238-204ENST00000451070 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
LINC01238-204ENST00000451070 CHPF2Q9P2E5 772 aa12.93□□□□□ -0.34
LINC01238-204ENST00000451070 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
LINC01238-204ENST00000451070 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
LINC01238-204ENST00000451070 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
LINC01238-204ENST00000451070 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
LINC01238-204ENST00000451070 EIF6P56537 245 aaKnown RBP12.92□□□□□ -0.34
LINC01238-204ENST00000451070 LARGE2Q8N3Y3 721 aa12.92□□□□□ -0.34
LINC01238-204ENST00000451070 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
LINC01238-204ENST00000451070 HOXB7P09629 217 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 SCNN1DP51172 638 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 HDGFL1Q5TGJ6 251 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 PNMA8AQ86V59 439 aaPredicted RBP12.91□□□□□ -0.34
LINC01238-204ENST00000451070 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 TRMT112Q9UI30 125 aaKnown RBP12.91□□□□□ -0.34
LINC01238-204ENST00000451070 CLEC11AQ9Y240 323 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 GJA3Q9Y6H8 435 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 CNTNAP1P78357 1384 aa12.91□□□□□ -0.34
LINC01238-204ENST00000451070 PPIP5K2O43314 1243 aa12.9□□□□□ -0.34
LINC01238-204ENST00000451070 AOC3Q16853 763 aa12.9□□□□□ -0.34
LINC01238-204ENST00000451070 MAP1SQ66K74 1059 aaPredicted RBP12.9□□□□□ -0.34
LINC01238-204ENST00000451070 CNTROBQ8N137 903 aa12.9□□□□□ -0.34
LINC01238-204ENST00000451070 PLBD2Q8NHP8 589 aa12.9□□□□□ -0.34
LINC01238-204ENST00000451070 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
LINC01238-204ENST00000451070 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
LINC01238-204ENST00000451070 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 TMEM88BA6NKF7 163 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 BBOX1O75936 387 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 EPS15P42566 896 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 SP8Q8IXZ3 490 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 NIM1KQ8IY84 436 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
LINC01238-204ENST00000451070 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms