RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 PSMD1Q99460 953 aa15.24■□□□□ 0.03
UBE2D4-204ENST00000440899 NUP98P52948 1817 aa15.24■□□□□ 0.03
UBE2D4-204ENST00000440899 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
UBE2D4-204ENST00000440899 POTEJP0CG39 1038 aa15.23■□□□□ 0.03
UBE2D4-204ENST00000440899 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
UBE2D4-204ENST00000440899 CRAMP1Q96RY5 1269 aa15.23■□□□□ 0.03
UBE2D4-204ENST00000440899 TAF1DQ9H5J8 278 aaPredicted RBP15.23■□□□□ 0.03
UBE2D4-204ENST00000440899 FZD9O00144 591 aa15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 CCDC146Q8IYE0 955 aa15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
UBE2D4-204ENST00000440899 ZNF541Q9H0D2 1346 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 CHL1O00533 1208 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 ANXA1P04083 346 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 SLC10A5Q5PT55 438 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 COPS6Q7L5N1 327 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 NLRP3Q96P20 1036 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 HACL1Q9UJ83 578 aa15.21■□□□□ 0.03
UBE2D4-204ENST00000440899 SNED1Q8TER0 1413 aa15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 GPC2Q8N158 579 aa15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 DDX21Q9NR30 783 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 TRIM35Q9UPQ4 493 aa15.2■□□□□ 0.02
UBE2D4-204ENST00000440899 RNF123Q5XPI4 1314 aa15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 PPEF1O14829 653 aaPredicted RBP15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 AIMP1Q12904 312 aaKnown RBP15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 C3orf67Q6ZVT6 689 aa15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 PNMA8AQ86V59 439 aaPredicted RBP15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 XAGE3Q8WTP9 111 aa15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 TMX4Q9H1E5 349 aaPredicted RBP15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
UBE2D4-204ENST00000440899 SCN4AP35499 1836 aa15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 EPHX2P34913 555 aa15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 EIF6P56537 245 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 EAPPQ56P03 285 aaPredicted RBP15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
UBE2D4-204ENST00000440899 NLRP10Q86W26 655 aa15.17■□□□□ 0.02
UBE2D4-204ENST00000440899 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
UBE2D4-204ENST00000440899 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
UBE2D4-204ENST00000440899 BBOX1O75936 387 aa15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 ITGBL1O95965 494 aaPredicted RBP15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 HOXB7P09629 217 aa15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 KRT24Q2M2I5 525 aa15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 COL13A1Q5TAT6 717 aaPredicted RBP15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 VPS33BQ9H267 617 aa15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 TRMT112Q9UI30 125 aaKnown RBP15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 ATP6V0A2Q9Y487 856 aa15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 GJA3Q9Y6H8 435 aa15.16■□□□□ 0.02
UBE2D4-204ENST00000440899 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 HCLS1P14317 486 aaPredicted RBP15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 ABCC4O15439 1325 aa15.15■□□□□ 0.02
UBE2D4-204ENST00000440899 LMOD1P29536 600 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 DDX46Q7L014 1031 aaKnown RBP15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 NIM1KQ8IY84 436 aa15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 SUPT20HQ8NEM7 779 aa15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 DBF4Q9UBU7 674 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 SH3TC1Q8TE82 1336 aa15.14■□□□□ 0.01
UBE2D4-204ENST00000440899 TMEM88BA6NKF7 163 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 PPIP5K2O43314 1243 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 SLC51AQ86UW1 340 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 SP8Q8IXZ3 490 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 CNTROBQ8N137 903 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 RTFDC1Q9BY42 306 aaPredicted RBP15.13■□□□□ 0.01
UBE2D4-204ENST00000440899 AOC3Q16853 763 aa15.12■□□□□ 0.01
UBE2D4-204ENST00000440899 MAP1SQ66K74 1059 aaPredicted RBP15.12■□□□□ 0.01
UBE2D4-204ENST00000440899 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
UBE2D4-204ENST00000440899 COL4A5P29400 1685 aa15.12■□□□□ 0.01
UBE2D4-204ENST00000440899 CNTNAP1P78357 1384 aa15.11■□□□□ 0.01
UBE2D4-204ENST00000440899 SCNN1DP51172 638 aa15.11■□□□□ 0.01
UBE2D4-204ENST00000440899 GRAPQ13588 217 aa15.11■□□□□ 0.01
UBE2D4-204ENST00000440899 DUSP27Q5VZP5 1158 aa15.11■□□□□ 0.01
UBE2D4-204ENST00000440899 DPP8Q6V1X1 898 aaPredicted RBP15.11■□□□□ 0.01
UBE2D4-204ENST00000440899 GRAPLQ8TC17 118 aaPredicted RBP15.11■□□□□ 0.01
UBE2D4-204ENST00000440899 ZNF853P0CG23 659 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 EPS15P42566 896 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 CALD1Q05682 793 aaKnown RBP15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 USP50Q70EL3 339 aaPredicted RBP15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 TNS4Q8IZW8 715 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 MPNDQ8N594 471 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 ISCA1Q9BUE6 129 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
UBE2D4-204ENST00000440899 ZNRF3Q9ULT6 936 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms