RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 NIP7Q9Y221 180 aaKnown RBP eCLIP23.42■■□□□ 1.34
HDAC7-213ENST00000440293 IL16Q14005 1332 aa23.41■■□□□ 1.34
HDAC7-213ENST00000440293 HOXB7P09629 217 aa23.41■■□□□ 1.34
HDAC7-213ENST00000440293 MYL6BP14649 208 aa23.4■■□□□ 1.34
HDAC7-213ENST00000440293 TAF1DQ9H5J8 278 aaPredicted RBP23.4■■□□□ 1.34
HDAC7-213ENST00000440293 PASKQ96RG2 1323 aa23.39■■□□□ 1.34
HDAC7-213ENST00000440293 ERVV-1B6SEH8 477 aa23.39■■□□□ 1.33
HDAC7-213ENST00000440293 GRIPAP1Q4V328 841 aa23.39■■□□□ 1.33
HDAC7-213ENST00000440293 DUSP27Q5VZP5 1158 aa23.39■■□□□ 1.33
HDAC7-213ENST00000440293 CC2D2BQ6DHV5 1058 aa23.38■■□□□ 1.33
HDAC7-213ENST00000440293 NYXQ9GZU5 481 aa23.38■■□□□ 1.33
HDAC7-213ENST00000440293 SCN4AP35499 1836 aa23.38■■□□□ 1.33
HDAC7-213ENST00000440293 PDIA6Q15084 440 aa23.37■■□□□ 1.33
HDAC7-213ENST00000440293 PNMA8AQ86V59 439 aaPredicted RBP23.37■■□□□ 1.33
HDAC7-213ENST00000440293 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
HDAC7-213ENST00000440293 FZD9O00144 591 aa23.36■■□□□ 1.33
HDAC7-213ENST00000440293 POTEIP0CG38 1075 aa23.36■■□□□ 1.33
HDAC7-213ENST00000440293 POTEJP0CG39 1038 aa23.36■■□□□ 1.33
HDAC7-213ENST00000440293 GTF2E1P29083 439 aaPredicted RBP23.36■■□□□ 1.33
HDAC7-213ENST00000440293 CRY2Q49AN0 593 aa23.36■■□□□ 1.33
HDAC7-213ENST00000440293 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
HDAC7-213ENST00000440293 PSMD1Q99460 953 aa23.36■■□□□ 1.33
HDAC7-213ENST00000440293 ELL2O00472 640 aaPredicted RBP23.35■■□□□ 1.33
HDAC7-213ENST00000440293 TSR2Q969E8 191 aaKnown RBP23.35■■□□□ 1.33
HDAC7-213ENST00000440293 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
HDAC7-213ENST00000440293 DDX21Q9NR30 783 aaKnown RBP eCLIP23.35■■□□□ 1.33
HDAC7-213ENST00000440293 HACL1Q9UJ83 578 aa23.35■■□□□ 1.33
HDAC7-213ENST00000440293 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
HDAC7-213ENST00000440293 ITGBL1O95965 494 aaPredicted RBP23.34■■□□□ 1.33
HDAC7-213ENST00000440293 IARSP41252 1262 aaKnown RBP23.34■■□□□ 1.33
HDAC7-213ENST00000440293 HLFQ16534 295 aa23.34■■□□□ 1.33
HDAC7-213ENST00000440293 KIF6Q6ZMV9 814 aa23.34■■□□□ 1.33
HDAC7-213ENST00000440293 C8orf58Q8NAV2 365 aa23.34■■□□□ 1.33
HDAC7-213ENST00000440293 ZNF277Q9NRM2 450 aaPredicted RBP23.34■■□□□ 1.33
HDAC7-213ENST00000440293 IBTKQ9P2D0 1353 aaPredicted RBP23.33■■□□□ 1.33
HDAC7-213ENST00000440293 TMEM88BA6NKF7 163 aa23.33■■□□□ 1.33
HDAC7-213ENST00000440293 TTLL7Q6ZT98 887 aa23.33■■□□□ 1.33
HDAC7-213ENST00000440293 GPC2Q8N158 579 aa23.33■■□□□ 1.33
HDAC7-213ENST00000440293 ANXA1P04083 346 aa23.32■■□□□ 1.32
HDAC7-213ENST00000440293 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
HDAC7-213ENST00000440293 PROSER3Q2NL68 480 aa23.32■■□□□ 1.32
HDAC7-213ENST00000440293 LRP10Q7Z4F1 713 aa23.32■■□□□ 1.32
HDAC7-213ENST00000440293 SYNE4Q8N205 404 aa23.32■■□□□ 1.32
HDAC7-213ENST00000440293 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
HDAC7-213ENST00000440293 MKRN1Q9UHC7 482 aaKnown RBP23.32■■□□□ 1.32
HDAC7-213ENST00000440293 RIC1Q4ADV7 1423 aa23.32■■□□□ 1.32
HDAC7-213ENST00000440293 MAP3K15Q6ZN16 1313 aa23.32■■□□□ 1.32
HDAC7-213ENST00000440293 EPHX2P34913 555 aa23.31■■□□□ 1.32
HDAC7-213ENST00000440293 JDP2Q8WYK2 163 aa23.31■■□□□ 1.32
HDAC7-213ENST00000440293 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
HDAC7-213ENST00000440293 LAMB4A4D0S4 1761 aa23.3■■□□□ 1.32
HDAC7-213ENST00000440293 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
HDAC7-213ENST00000440293 COPS6Q7L5N1 327 aa23.3■■□□□ 1.32
HDAC7-213ENST00000440293 PRDM10Q9NQV6 1147 aa23.3■■□□□ 1.32
HDAC7-213ENST00000440293 SNED1Q8TER0 1413 aa23.3■■□□□ 1.32
HDAC7-213ENST00000440293 ZNF541Q9H0D2 1346 aa23.3■■□□□ 1.32
HDAC7-213ENST00000440293 TSPYL6Q8N831 410 aa23.29■■□□□ 1.32
HDAC7-213ENST00000440293 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
HDAC7-213ENST00000440293 HYPKQ9NX55 129 aa23.29■■□□□ 1.32
HDAC7-213ENST00000440293 FAM177BA6PVY3 158 aa23.28■■□□□ 1.32
HDAC7-213ENST00000440293 AIMP1Q12904 312 aaKnown RBP23.28■■□□□ 1.32
HDAC7-213ENST00000440293 XAGE3Q8WTP9 111 aa23.28■■□□□ 1.32
HDAC7-213ENST00000440293 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
HDAC7-213ENST00000440293 SPINK5Q9NQ38 1064 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-213ENST00000440293 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
HDAC7-213ENST00000440293 FANCIQ9NVI1 1328 aa23.28■■□□□ 1.32
HDAC7-213ENST00000440293 CACNA1SQ13698 1873 aa23.28■■□□□ 1.32
HDAC7-213ENST00000440293 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
HDAC7-213ENST00000440293 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
HDAC7-213ENST00000440293 CRAMP1Q96RY5 1269 aa23.27■■□□□ 1.32
HDAC7-213ENST00000440293 VPS33BQ9H267 617 aa23.27■■□□□ 1.32
HDAC7-213ENST00000440293 CLEC11AQ9Y240 323 aa23.27■■□□□ 1.32
HDAC7-213ENST00000440293 CAPN15O75808 1086 aa23.26■■□□□ 1.31
HDAC7-213ENST00000440293 EIF6P56537 245 aaKnown RBP23.26■■□□□ 1.31
HDAC7-213ENST00000440293 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
HDAC7-213ENST00000440293 OLFM4Q6UX06 510 aa23.26■■□□□ 1.31
HDAC7-213ENST00000440293 GIGYF2Q6Y7W6 1299 aaKnown RBP23.26■■□□□ 1.31
HDAC7-213ENST00000440293 CNTROBQ8N137 903 aa23.26■■□□□ 1.31
HDAC7-213ENST00000440293 RPGRQ92834 1020 aaKnown RBP23.26■■□□□ 1.31
HDAC7-213ENST00000440293 RASSF10A6NK89 507 aa23.25■■□□□ 1.31
HDAC7-213ENST00000440293 ZNF34Q8IZ26 560 aa23.25■■□□□ 1.31
HDAC7-213ENST00000440293 AIDAQ96BJ3 306 aa23.25■■□□□ 1.31
HDAC7-213ENST00000440293 RBM17Q96I25 401 aaKnown RBP23.25■■□□□ 1.31
HDAC7-213ENST00000440293 ADAMTSL1Q8N6G6 1762 aa23.24■■□□□ 1.31
HDAC7-213ENST00000440293 CTCFP49711 727 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-213ENST00000440293 VEGFBP49765 207 aa23.24■■□□□ 1.31
HDAC7-213ENST00000440293 RNF123Q5XPI4 1314 aa23.24■■□□□ 1.31
HDAC7-213ENST00000440293 FOXN1O15353 648 aa23.23■■□□□ 1.31
HDAC7-213ENST00000440293 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
HDAC7-213ENST00000440293 PARP10Q53GL7 1025 aa23.23■■□□□ 1.31
HDAC7-213ENST00000440293 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
HDAC7-213ENST00000440293 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
HDAC7-213ENST00000440293 ABCC12Q96J65 1359 aa23.23■■□□□ 1.31
HDAC7-213ENST00000440293 DEFB115Q30KQ5 88 aa23.22■■□□□ 1.31
HDAC7-213ENST00000440293 ANKRD13DQ6ZTN6 518 aa23.22■■□□□ 1.31
HDAC7-213ENST00000440293 WBP1LQ9NX94 342 aa23.22■■□□□ 1.31
HDAC7-213ENST00000440293 VAMP4O75379 141 aa23.21■■□□□ 1.31
HDAC7-213ENST00000440293 LMOD1P29536 600 aaPredicted RBP23.21■■□□□ 1.31
HDAC7-213ENST00000440293 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
HDAC7-213ENST00000440293 SUSD4Q5VX71 490 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms