RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CRAMP1Q96RY5 1269 aa27.17■■□□□ 1.94
CPNE1-219ENST00000440240 NTSR2O95665 410 aa27.16■■□□□ 1.94
CPNE1-219ENST00000440240 NEUROD2Q15784 382 aa27.16■■□□□ 1.94
CPNE1-219ENST00000440240 JDP2Q8WYK2 163 aa27.16■■□□□ 1.94
CPNE1-219ENST00000440240 TAF1DQ9H5J8 278 aaPredicted RBP27.16■■□□□ 1.94
CPNE1-219ENST00000440240 PCNTO95613 3336 aa27.15■■□□□ 1.94
CPNE1-219ENST00000440240 FZD9O00144 591 aa27.15■■□□□ 1.94
CPNE1-219ENST00000440240 WDR43Q15061 677 aaKnown RBP eCLIP27.15■■□□□ 1.94
CPNE1-219ENST00000440240 NLRP3Q96P20 1036 aa27.15■■□□□ 1.94
CPNE1-219ENST00000440240 LDHDQ86WU2 507 aa27.14■■□□□ 1.94
CPNE1-219ENST00000440240 CCDC146Q8IYE0 955 aa27.14■■□□□ 1.94
CPNE1-219ENST00000440240 RUNDC1Q96C34 613 aa27.14■■□□□ 1.94
CPNE1-219ENST00000440240 UTP14AQ9BVJ6 771 aaKnown RBP27.14■■□□□ 1.94
CPNE1-219ENST00000440240 CHL1O00533 1208 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 POTEIP0CG38 1075 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 POTEJP0CG39 1038 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 HSP90AB3PQ58FF7 597 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 SLC10A5Q5PT55 438 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 HACL1Q9UJ83 578 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 ZNF541Q9H0D2 1346 aa27.13■■□□□ 1.93
CPNE1-219ENST00000440240 PROSER3Q2NL68 480 aa27.12■■□□□ 1.93
CPNE1-219ENST00000440240 COPS6Q7L5N1 327 aa27.12■■□□□ 1.93
CPNE1-219ENST00000440240 TMX4Q9H1E5 349 aaPredicted RBP27.12■■□□□ 1.93
CPNE1-219ENST00000440240 CREBZFQ9NS37 354 aa27.12■■□□□ 1.93
CPNE1-219ENST00000440240 ANXA1P04083 346 aa27.11■■□□□ 1.93
CPNE1-219ENST00000440240 GPC2Q8N158 579 aa27.11■■□□□ 1.93
CPNE1-219ENST00000440240 RNF123Q5XPI4 1314 aa27.11■■□□□ 1.93
CPNE1-219ENST00000440240 PNMA8AQ86V59 439 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-219ENST00000440240 NECTIN2Q92692 538 aa27.1■■□□□ 1.93
CPNE1-219ENST00000440240 DDX21Q9NR30 783 aaKnown RBP eCLIP27.1■■□□□ 1.93
CPNE1-219ENST00000440240 SCN4AP35499 1836 aa27.09■■□□□ 1.93
CPNE1-219ENST00000440240 SNED1Q8TER0 1413 aa27.09■■□□□ 1.93
CPNE1-219ENST00000440240 PPEF1O14829 653 aaPredicted RBP27.09■■□□□ 1.93
CPNE1-219ENST00000440240 AIMP1Q12904 312 aaKnown RBP27.09■■□□□ 1.93
CPNE1-219ENST00000440240 XAGE3Q8WTP9 111 aa27.09■■□□□ 1.93
CPNE1-219ENST00000440240 ADAMTS8Q9UP79 889 aa27.09■■□□□ 1.93
CPNE1-219ENST00000440240 TRIM35Q9UPQ4 493 aa27.09■■□□□ 1.93
CPNE1-219ENST00000440240 LAS1LQ9Y4W2 734 aaKnown RBP27.09■■□□□ 1.93
CPNE1-219ENST00000440240 EPHX2P34913 555 aa27.08■■□□□ 1.93
CPNE1-219ENST00000440240 EIF6P56537 245 aaKnown RBP27.08■■□□□ 1.93
CPNE1-219ENST00000440240 EAPPQ56P03 285 aaPredicted RBP27.08■■□□□ 1.93
CPNE1-219ENST00000440240 C3orf67Q6ZVT6 689 aa27.08■■□□□ 1.93
CPNE1-219ENST00000440240 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
CPNE1-219ENST00000440240 TCERG1O14776 1098 aaKnown RBP27.06■■□□□ 1.92
CPNE1-219ENST00000440240 NLRP10Q86W26 655 aa27.06■■□□□ 1.92
CPNE1-219ENST00000440240 LARGE2Q8N3Y3 721 aa27.06■■□□□ 1.92
CPNE1-219ENST00000440240 CLEC11AQ9Y240 323 aa27.06■■□□□ 1.92
CPNE1-219ENST00000440240 HOXB7P09629 217 aa27.05■■□□□ 1.92
CPNE1-219ENST00000440240 VPS33BQ9H267 617 aa27.05■■□□□ 1.92
CPNE1-219ENST00000440240 ATP6V0A2Q9Y487 856 aa27.05■■□□□ 1.92
CPNE1-219ENST00000440240 PASKQ96RG2 1323 aa27.05■■□□□ 1.92
CPNE1-219ENST00000440240 BBOX1O75936 387 aa27.04■■□□□ 1.92
CPNE1-219ENST00000440240 KRT24Q2M2I5 525 aa27.04■■□□□ 1.92
CPNE1-219ENST00000440240 TRMT112Q9UI30 125 aaKnown RBP27.04■■□□□ 1.92
CPNE1-219ENST00000440240 ITGBL1O95965 494 aaPredicted RBP27.03■■□□□ 1.92
CPNE1-219ENST00000440240 GJA3Q9Y6H8 435 aa27.03■■□□□ 1.92
CPNE1-219ENST00000440240 COL13A1Q5TAT6 717 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-219ENST00000440240 HDGFL1Q5TGJ6 251 aa27.02■■□□□ 1.92
CPNE1-219ENST00000440240 CFAP44Q96MT7 982 aa27.02■■□□□ 1.92
CPNE1-219ENST00000440240 CHPF2Q9P2E5 772 aa27.02■■□□□ 1.92
CPNE1-219ENST00000440240 DBF4Q9UBU7 674 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-219ENST00000440240 SH3TC1Q8TE82 1336 aa27.01■■□□□ 1.91
CPNE1-219ENST00000440240 HSPA1AP0DMV8 641 aaKnown RBP27.01■■□□□ 1.91
CPNE1-219ENST00000440240 HSPA1BP0DMV9 641 aaKnown RBP27.01■■□□□ 1.91
CPNE1-219ENST00000440240 LMOD1P29536 600 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-219ENST00000440240 SUPT20HQ8NEM7 779 aa27.01■■□□□ 1.91
CPNE1-219ENST00000440240 PRKRIP1Q9H875 184 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-219ENST00000440240 MKRN1Q9UHC7 482 aaKnown RBP27.01■■□□□ 1.91
CPNE1-219ENST00000440240 TMEM88BA6NKF7 163 aa27■■□□□ 1.91
CPNE1-219ENST00000440240 HCLS1P14317 486 aaPredicted RBP27■■□□□ 1.91
CPNE1-219ENST00000440240 ANKRD13DQ6ZTN6 518 aa27■■□□□ 1.91
CPNE1-219ENST00000440240 NIM1KQ8IY84 436 aa27■■□□□ 1.91
CPNE1-219ENST00000440240 PLBD2Q8NHP8 589 aa27■■□□□ 1.91
CPNE1-219ENST00000440240 ABCC4O15439 1325 aa26.99■■□□□ 1.91
CPNE1-219ENST00000440240 PPIP5K2O43314 1243 aa26.99■■□□□ 1.91
CPNE1-219ENST00000440240 DDX46Q7L014 1031 aaKnown RBP26.99■■□□□ 1.91
CPNE1-219ENST00000440240 SP8Q8IXZ3 490 aa26.99■■□□□ 1.91
CPNE1-219ENST00000440240 CNTROBQ8N137 903 aa26.99■■□□□ 1.91
CPNE1-219ENST00000440240 HYPKQ9NX55 129 aa26.98■■□□□ 1.91
CPNE1-219ENST00000440240 RTFDC1Q9BY42 306 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-219ENST00000440240 AOC3Q16853 763 aa26.96■■□□□ 1.91
CPNE1-219ENST00000440240 DUSP27Q5VZP5 1158 aa26.96■■□□□ 1.91
CPNE1-219ENST00000440240 MAP1SQ66K74 1059 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-219ENST00000440240 DPP8Q6V1X1 898 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-219ENST00000440240 SLC51AQ86UW1 340 aa26.96■■□□□ 1.91
CPNE1-219ENST00000440240 MPNDQ8N594 471 aa26.96■■□□□ 1.91
CPNE1-219ENST00000440240 CNTNAP1P78357 1384 aa26.96■■□□□ 1.91
CPNE1-219ENST00000440240 COL4A5P29400 1685 aa26.95■■□□□ 1.9
CPNE1-219ENST00000440240 SCNN1DP51172 638 aa26.94■■□□□ 1.9
CPNE1-219ENST00000440240 CALD1Q05682 793 aaKnown RBP26.94■■□□□ 1.9
CPNE1-219ENST00000440240 GRAPQ13588 217 aa26.94■■□□□ 1.9
CPNE1-219ENST00000440240 TMC4Q7Z404 712 aa26.94■■□□□ 1.9
CPNE1-219ENST00000440240 GRAPLQ8TC17 118 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-219ENST00000440240 MBIPQ9NS73 344 aa26.94■■□□□ 1.9
CPNE1-219ENST00000440240 ZNRF3Q9ULT6 936 aa26.94■■□□□ 1.9
CPNE1-219ENST00000440240 EPS15P42566 896 aa26.93■■□□□ 1.9
CPNE1-219ENST00000440240 USP50Q70EL3 339 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-219ENST00000440240 ISCA1Q9BUE6 129 aa26.93■■□□□ 1.9
CPNE1-219ENST00000440240 APAF1O14727 1248 aa26.92■■□□□ 1.9
CPNE1-219ENST00000440240 ZNF853P0CG23 659 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms