RNA–Protein interactions for RNA: ENST00000437028.5

SNHG11-208, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 3

Gene SNHG11, Length 1,169 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-208ENST00000437028 SUSD4Q5VX71 490 aa20.2■□□□□ 0.82
SNHG11-208ENST00000437028 LDHDQ86WU2 507 aa20.2■□□□□ 0.82
SNHG11-208ENST00000437028 TMX4Q9H1E5 349 aaPredicted RBP20.2■□□□□ 0.82
SNHG11-208ENST00000437028 OLFM4Q6UX06 510 aa20.19■□□□□ 0.82
SNHG11-208ENST00000437028 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
SNHG11-208ENST00000437028 TAF1DQ9H5J8 278 aaPredicted RBP20.19■□□□□ 0.82
SNHG11-208ENST00000437028 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
SNHG11-208ENST00000437028 CREBZFQ9NS37 354 aa20.19■□□□□ 0.82
SNHG11-208ENST00000437028 NTSR2O95665 410 aa20.18■□□□□ 0.82
SNHG11-208ENST00000437028 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
SNHG11-208ENST00000437028 HACL1Q9UJ83 578 aa20.18■□□□□ 0.82
SNHG11-208ENST00000437028 RNF123Q5XPI4 1314 aa20.18■□□□□ 0.82
SNHG11-208ENST00000437028 ZNF541Q9H0D2 1346 aa20.18■□□□□ 0.82
SNHG11-208ENST00000437028 FZD9O00144 591 aa20.17■□□□□ 0.82
SNHG11-208ENST00000437028 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
SNHG11-208ENST00000437028 GPC2Q8N158 579 aa20.17■□□□□ 0.82
SNHG11-208ENST00000437028 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
SNHG11-208ENST00000437028 PPEF1O14829 653 aaPredicted RBP20.16■□□□□ 0.82
SNHG11-208ENST00000437028 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
SNHG11-208ENST00000437028 PDIA6Q15084 440 aa20.16■□□□□ 0.82
SNHG11-208ENST00000437028 PNMA8AQ86V59 439 aaPredicted RBP20.16■□□□□ 0.82
SNHG11-208ENST00000437028 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
SNHG11-208ENST00000437028 SNED1Q8TER0 1413 aa20.16■□□□□ 0.82
SNHG11-208ENST00000437028 POTEIP0CG38 1075 aa20.15■□□□□ 0.82
SNHG11-208ENST00000437028 POTEJP0CG39 1038 aa20.15■□□□□ 0.82
SNHG11-208ENST00000437028 EAPPQ56P03 285 aaPredicted RBP20.15■□□□□ 0.82
SNHG11-208ENST00000437028 EPHX2P34913 555 aa20.14■□□□□ 0.81
SNHG11-208ENST00000437028 NEUROD2Q15784 382 aa20.14■□□□□ 0.81
SNHG11-208ENST00000437028 LRP10Q7Z4F1 713 aa20.14■□□□□ 0.81
SNHG11-208ENST00000437028 RUNDC1Q96C34 613 aa20.14■□□□□ 0.81
SNHG11-208ENST00000437028 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
SNHG11-208ENST00000437028 ANKRD36CQ5JPF3 1778 aa20.13■□□□□ 0.81
SNHG11-208ENST00000437028 SLC10A5Q5PT55 438 aa20.13■□□□□ 0.81
SNHG11-208ENST00000437028 LARGE2Q8N3Y3 721 aa20.13■□□□□ 0.81
SNHG11-208ENST00000437028 PASKQ96RG2 1323 aa20.12■□□□□ 0.81
SNHG11-208ENST00000437028 HSPA1AP0DMV8 641 aaKnown RBP20.12■□□□□ 0.81
SNHG11-208ENST00000437028 HSPA1BP0DMV9 641 aaKnown RBP20.12■□□□□ 0.81
SNHG11-208ENST00000437028 LMOD1P29536 600 aaPredicted RBP20.12■□□□□ 0.81
SNHG11-208ENST00000437028 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
SNHG11-208ENST00000437028 COPS6Q7L5N1 327 aa20.12■□□□□ 0.81
SNHG11-208ENST00000437028 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
SNHG11-208ENST00000437028 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
SNHG11-208ENST00000437028 CHL1O00533 1208 aa20.11■□□□□ 0.81
SNHG11-208ENST00000437028 ANXA1P04083 346 aa20.11■□□□□ 0.81
SNHG11-208ENST00000437028 AIMP1Q12904 312 aaKnown RBP20.11■□□□□ 0.81
SNHG11-208ENST00000437028 XAGE3Q8WTP9 111 aa20.11■□□□□ 0.81
SNHG11-208ENST00000437028 VPS33BQ9H267 617 aa20.11■□□□□ 0.81
SNHG11-208ENST00000437028 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
SNHG11-208ENST00000437028 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
SNHG11-208ENST00000437028 HOXB7P09629 217 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 SUPT20HQ8NEM7 779 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 MKRN1Q9UHC7 482 aaKnown RBP20.1■□□□□ 0.81
SNHG11-208ENST00000437028 ATP6V0A2Q9Y487 856 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 PCNTO95613 3336 aa20.1■□□□□ 0.81
SNHG11-208ENST00000437028 ADAMTSL1Q8N6G6 1762 aa20.09■□□□□ 0.81
SNHG11-208ENST00000437028 TMEM88BA6NKF7 163 aa20.09■□□□□ 0.81
SNHG11-208ENST00000437028 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
SNHG11-208ENST00000437028 C3orf67Q6ZVT6 689 aa20.09■□□□□ 0.81
SNHG11-208ENST00000437028 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
SNHG11-208ENST00000437028 BBOX1O75936 387 aa20.08■□□□□ 0.81
SNHG11-208ENST00000437028 TCIRG1Q13488 830 aa20.08■□□□□ 0.81
SNHG11-208ENST00000437028 TRMT112Q9UI30 125 aaKnown RBP20.08■□□□□ 0.81
SNHG11-208ENST00000437028 TRIM35Q9UPQ4 493 aa20.08■□□□□ 0.81
SNHG11-208ENST00000437028 CNTNAP1P78357 1384 aa20.08■□□□□ 0.8
SNHG11-208ENST00000437028 ABCC4O15439 1325 aa20.07■□□□□ 0.8
SNHG11-208ENST00000437028 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
SNHG11-208ENST00000437028 PPIP5K2O43314 1243 aa20.07■□□□□ 0.8
SNHG11-208ENST00000437028 ITGBL1O95965 494 aaPredicted RBP20.07■□□□□ 0.8
SNHG11-208ENST00000437028 CCDC184Q52MB2 194 aa20.07■□□□□ 0.8
SNHG11-208ENST00000437028 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
SNHG11-208ENST00000437028 DDX46Q7L014 1031 aaKnown RBP20.07■□□□□ 0.8
SNHG11-208ENST00000437028 TNS4Q8IZW8 715 aa20.07■□□□□ 0.8
SNHG11-208ENST00000437028 CNTROBQ8N137 903 aa20.06■□□□□ 0.8
SNHG11-208ENST00000437028 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
SNHG11-208ENST00000437028 DBF4Q9UBU7 674 aaPredicted RBP20.06■□□□□ 0.8
SNHG11-208ENST00000437028 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
SNHG11-208ENST00000437028 COL4A5P29400 1685 aa20.06■□□□□ 0.8
SNHG11-208ENST00000437028 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
SNHG11-208ENST00000437028 TMC4Q7Z404 712 aa20.05■□□□□ 0.8
SNHG11-208ENST00000437028 SP8Q8IXZ3 490 aa20.05■□□□□ 0.8
SNHG11-208ENST00000437028 PLBD2Q8NHP8 589 aa20.05■□□□□ 0.8
SNHG11-208ENST00000437028 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
SNHG11-208ENST00000437028 LAMB2P55268 1798 aa20.05■□□□□ 0.8
SNHG11-208ENST00000437028 HCLS1P14317 486 aaPredicted RBP20.04■□□□□ 0.8
SNHG11-208ENST00000437028 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
SNHG11-208ENST00000437028 AOC3Q16853 763 aa20.04■□□□□ 0.8
SNHG11-208ENST00000437028 KRT24Q2M2I5 525 aa20.04■□□□□ 0.8
SNHG11-208ENST00000437028 MAP1SQ66K74 1059 aaPredicted RBP20.04■□□□□ 0.8
SNHG11-208ENST00000437028 RTFDC1Q9BY42 306 aaPredicted RBP20.04■□□□□ 0.8
SNHG11-208ENST00000437028 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
SNHG11-208ENST00000437028 GRAPQ13588 217 aa20.03■□□□□ 0.8
SNHG11-208ENST00000437028 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
SNHG11-208ENST00000437028 ANKRD13DQ6ZTN6 518 aa20.03■□□□□ 0.8
SNHG11-208ENST00000437028 USP50Q70EL3 339 aaPredicted RBP20.03■□□□□ 0.8
SNHG11-208ENST00000437028 MPNDQ8N594 471 aa20.03■□□□□ 0.8
SNHG11-208ENST00000437028 GRAPLQ8TC17 118 aaPredicted RBP20.03■□□□□ 0.8
SNHG11-208ENST00000437028 ZNRF3Q9ULT6 936 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms