RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 CHL1O00533 1208 aa29.3■■■□□ 2.28
HMG20B-205ENST00000435022 ALDH1B1P30837 517 aa29.3■■■□□ 2.28
HMG20B-205ENST00000435022 HOXA10P31260 410 aaPredicted RBP29.3■■■□□ 2.28
HMG20B-205ENST00000435022 NECTIN2Q92692 538 aa29.3■■■□□ 2.28
HMG20B-205ENST00000435022 RUNDC1Q96C34 613 aa29.29■■■□□ 2.28
HMG20B-205ENST00000435022 L3MBTL3Q96JM7 780 aaPredicted RBP29.29■■■□□ 2.28
HMG20B-205ENST00000435022 ADAMTS8Q9UP79 889 aa29.29■■■□□ 2.28
HMG20B-205ENST00000435022 SCN4AP35499 1836 aa29.29■■■□□ 2.28
HMG20B-205ENST00000435022 LAMB2P55268 1798 aa29.29■■■□□ 2.28
HMG20B-205ENST00000435022 RTKN2Q8IZC4 609 aa29.28■■■□□ 2.28
HMG20B-205ENST00000435022 SYNE4Q8N205 404 aa29.27■■■□□ 2.28
HMG20B-205ENST00000435022 ADAMTSL1Q8N6G6 1762 aa29.26■■■□□ 2.28
HMG20B-205ENST00000435022 IARSP41252 1262 aaKnown RBP29.25■■■□□ 2.27
HMG20B-205ENST00000435022 XAGE3Q8WTP9 111 aa29.25■■■□□ 2.27
HMG20B-205ENST00000435022 PSMD1Q99460 953 aa29.25■■■□□ 2.27
HMG20B-205ENST00000435022 PRKRIP1Q9H875 184 aaPredicted RBP29.25■■■□□ 2.27
HMG20B-205ENST00000435022 PARP10Q53GL7 1025 aa29.24■■■□□ 2.27
HMG20B-205ENST00000435022 COPS6Q7L5N1 327 aa29.24■■■□□ 2.27
HMG20B-205ENST00000435022 RPGRQ92834 1020 aaKnown RBP29.24■■■□□ 2.27
HMG20B-205ENST00000435022 FZD9O00144 591 aa29.23■■■□□ 2.27
HMG20B-205ENST00000435022 WDR43Q15061 677 aaKnown RBP eCLIP29.23■■■□□ 2.27
HMG20B-205ENST00000435022 CHADLQ6NUI6 762 aa29.23■■■□□ 2.27
HMG20B-205ENST00000435022 TAF1DQ9H5J8 278 aaPredicted RBP29.23■■■□□ 2.27
HMG20B-205ENST00000435022 PPP1R42Q7Z4L9 355 aa29.22■■■□□ 2.27
HMG20B-205ENST00000435022 CRAMP1Q96RY5 1269 aa29.22■■■□□ 2.27
HMG20B-205ENST00000435022 LTBP1Q14766 1721 aa29.21■■■□□ 2.27
HMG20B-205ENST00000435022 AIMP1Q12904 312 aaKnown RBP29.21■■■□□ 2.27
HMG20B-205ENST00000435022 SLC10A5Q5PT55 438 aa29.21■■■□□ 2.27
HMG20B-205ENST00000435022 DDX21Q9NR30 783 aaKnown RBP eCLIP29.21■■■□□ 2.27
HMG20B-205ENST00000435022 LAS1LQ9Y4W2 734 aaKnown RBP29.21■■■□□ 2.27
HMG20B-205ENST00000435022 NLRP10Q86W26 655 aa29.2■■■□□ 2.26
HMG20B-205ENST00000435022 UTP14AQ9BVJ6 771 aaKnown RBP29.2■■■□□ 2.26
HMG20B-205ENST00000435022 CHPF2Q9P2E5 772 aa29.2■■■□□ 2.26
HMG20B-205ENST00000435022 PPEF1O14829 653 aaPredicted RBP29.19■■■□□ 2.26
HMG20B-205ENST00000435022 RBM17Q96I25 401 aaKnown RBP29.19■■■□□ 2.26
HMG20B-205ENST00000435022 IQCA1LA6NCM1 817 aa29.18■■■□□ 2.26
HMG20B-205ENST00000435022 CC2D2BQ6DHV5 1058 aa29.18■■■□□ 2.26
HMG20B-205ENST00000435022 TCERG1O14776 1098 aaKnown RBP29.17■■■□□ 2.26
HMG20B-205ENST00000435022 ABCC4O15439 1325 aa29.17■■■□□ 2.26
HMG20B-205ENST00000435022 RNF123Q5XPI4 1314 aa29.17■■■□□ 2.26
HMG20B-205ENST00000435022 DDX60Q8IY21 1712 aaKnown RBP29.17■■■□□ 2.26
HMG20B-205ENST00000435022 TCIRG1Q13488 830 aa29.16■■■□□ 2.26
HMG20B-205ENST00000435022 NLRP3Q96P20 1036 aa29.16■■■□□ 2.26
HMG20B-205ENST00000435022 TAF1P21675 1872 aa29.16■■■□□ 2.26
HMG20B-205ENST00000435022 PASKQ96RG2 1323 aa29.16■■■□□ 2.26
HMG20B-205ENST00000435022 LDHDQ86WU2 507 aa29.15■■■□□ 2.26
HMG20B-205ENST00000435022 ZNF428Q96B54 188 aa29.15■■■□□ 2.26
HMG20B-205ENST00000435022 HCLS1P14317 486 aaPredicted RBP29.14■■■□□ 2.26
HMG20B-205ENST00000435022 HDGFL1Q5TGJ6 251 aa29.14■■■□□ 2.26
HMG20B-205ENST00000435022 CFAP44Q96MT7 982 aa29.14■■■□□ 2.26
HMG20B-205ENST00000435022 MBIPQ9NS73 344 aa29.14■■■□□ 2.26
HMG20B-205ENST00000435022 HACL1Q9UJ83 578 aa29.14■■■□□ 2.26
HMG20B-205ENST00000435022 PCNTO95613 3336 aa29.14■■■□□ 2.26
HMG20B-205ENST00000435022 COL4A1P02462 1669 aa29.14■■■□□ 2.26
HMG20B-205ENST00000435022 ZNF853P0CG23 659 aa29.13■■■□□ 2.25
HMG20B-205ENST00000435022 HSP90AB3PQ58FF7 597 aa29.13■■■□□ 2.25
HMG20B-205ENST00000435022 HOXB7P09629 217 aa29.12■■■□□ 2.25
HMG20B-205ENST00000435022 EPHX2P34913 555 aa29.12■■■□□ 2.25
HMG20B-205ENST00000435022 ZEB1P37275 1124 aaPredicted RBP29.12■■■□□ 2.25
HMG20B-205ENST00000435022 GPC2Q8N158 579 aa29.12■■■□□ 2.25
HMG20B-205ENST00000435022 ATP6V0A2Q9Y487 856 aa29.12■■■□□ 2.25
HMG20B-205ENST00000435022 ITGBL1O95965 494 aaPredicted RBP29.11■■■□□ 2.25
HMG20B-205ENST00000435022 CREBZFQ9NS37 354 aa29.11■■■□□ 2.25
HMG20B-205ENST00000435022 DUOX1Q9NRD9 1551 aa29.1■■■□□ 2.25
HMG20B-205ENST00000435022 APAF1O14727 1248 aa29.1■■■□□ 2.25
HMG20B-205ENST00000435022 EAPPQ56P03 285 aaPredicted RBP29.1■■■□□ 2.25
HMG20B-205ENST00000435022 DUSP27Q5VZP5 1158 aa29.1■■■□□ 2.25
HMG20B-205ENST00000435022 JDP2Q8WYK2 163 aa29.1■■■□□ 2.25
HMG20B-205ENST00000435022 LRRC37AA6NMS7 1700 aa29.09■■■□□ 2.25
HMG20B-205ENST00000435022 LARGE2Q8N3Y3 721 aa29.09■■■□□ 2.25
HMG20B-205ENST00000435022 PLBD2Q8NHP8 589 aa29.09■■■□□ 2.25
HMG20B-205ENST00000435022 TRMT112Q9UI30 125 aaKnown RBP29.09■■■□□ 2.25
HMG20B-205ENST00000435022 GRIPAP1Q4V328 841 aa29.08■■■□□ 2.25
HMG20B-205ENST00000435022 COL13A1Q5TAT6 717 aaPredicted RBP29.08■■■□□ 2.25
HMG20B-205ENST00000435022 ISCA1Q9BUE6 129 aa29.08■■■□□ 2.25
HMG20B-205ENST00000435022 SH3TC1Q8TE82 1336 aa29.08■■■□□ 2.25
HMG20B-205ENST00000435022 SCNN1DP51172 638 aa29.07■■■□□ 2.24
HMG20B-205ENST00000435022 AOC3Q16853 763 aa29.07■■■□□ 2.24
HMG20B-205ENST00000435022 DBF4Q9UBU7 674 aaPredicted RBP29.07■■■□□ 2.24
HMG20B-205ENST00000435022 GJA3Q9Y6H8 435 aa29.07■■■□□ 2.24
HMG20B-205ENST00000435022 CCDC184Q52MB2 194 aa29.06■■■□□ 2.24
HMG20B-205ENST00000435022 RTFDC1Q9BY42 306 aaPredicted RBP29.06■■■□□ 2.24
HMG20B-205ENST00000435022 MKRN1Q9UHC7 482 aaKnown RBP29.06■■■□□ 2.24
HMG20B-205ENST00000435022 EIF6P56537 245 aaKnown RBP29.05■■■□□ 2.24
HMG20B-205ENST00000435022 ANKRD13DQ6ZTN6 518 aa29.05■■■□□ 2.24
HMG20B-205ENST00000435022 ATP5J2-PTCD1G3V325 749 aa29.04■■■□□ 2.24
HMG20B-205ENST00000435022 PPIP5K2O43314 1243 aa29.04■■■□□ 2.24
HMG20B-205ENST00000435022 HSPA1AP0DMV8 641 aaKnown RBP29.04■■■□□ 2.24
HMG20B-205ENST00000435022 HSPA1BP0DMV9 641 aaKnown RBP29.04■■■□□ 2.24
HMG20B-205ENST00000435022 MAP1SQ66K74 1059 aaPredicted RBP29.04■■■□□ 2.24
HMG20B-205ENST00000435022 EPS15P42566 896 aa29.03■■■□□ 2.24
HMG20B-205ENST00000435022 GRAPQ13588 217 aa29.03■■■□□ 2.24
HMG20B-205ENST00000435022 SP8Q8IXZ3 490 aa29.03■■■□□ 2.24
HMG20B-205ENST00000435022 GRAPLQ8TC17 118 aaPredicted RBP29.03■■■□□ 2.24
HMG20B-205ENST00000435022 IFT57Q9NWB7 429 aa29.03■■■□□ 2.24
HMG20B-205ENST00000435022 CNTNAP1P78357 1384 aa29.02■■■□□ 2.24
HMG20B-205ENST00000435022 BBOX1O75936 387 aa29.02■■■□□ 2.24
HMG20B-205ENST00000435022 PNMA8AQ86V59 439 aaPredicted RBP29.02■■■□□ 2.24
HMG20B-205ENST00000435022 NIM1KQ8IY84 436 aa29.02■■■□□ 2.24
HMG20B-205ENST00000435022 FAM89AQ96GI7 184 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms