RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
RPUSD3-208ENST00000433972 UBN2Q6ZU65 1347 aa19.46■□□□□ 0.71
RPUSD3-208ENST00000433972 SUSD4Q5VX71 490 aa19.45■□□□□ 0.7
RPUSD3-208ENST00000433972 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
RPUSD3-208ENST00000433972 CRAMP1Q96RY5 1269 aa19.45■□□□□ 0.7
RPUSD3-208ENST00000433972 CREBZFQ9NS37 354 aa19.45■□□□□ 0.7
RPUSD3-208ENST00000433972 NTSR2O95665 410 aa19.44■□□□□ 0.7
RPUSD3-208ENST00000433972 PNMA8AQ86V59 439 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-208ENST00000433972 UTP14AQ9BVJ6 771 aaKnown RBP19.44■□□□□ 0.7
RPUSD3-208ENST00000433972 TAF1DQ9H5J8 278 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-208ENST00000433972 HACL1Q9UJ83 578 aa19.44■□□□□ 0.7
RPUSD3-208ENST00000433972 CACNA1SQ13698 1873 aa19.43■□□□□ 0.7
RPUSD3-208ENST00000433972 FZD9O00144 591 aa19.43■□□□□ 0.7
RPUSD3-208ENST00000433972 EIF6P56537 245 aaKnown RBP19.43■□□□□ 0.7
RPUSD3-208ENST00000433972 GPC2Q8N158 579 aa19.43■□□□□ 0.7
RPUSD3-208ENST00000433972 RUNDC1Q96C34 613 aa19.43■□□□□ 0.7
RPUSD3-208ENST00000433972 PPEF1O14829 653 aaPredicted RBP19.42■□□□□ 0.7
RPUSD3-208ENST00000433972 PDIA6Q15084 440 aa19.41■□□□□ 0.7
RPUSD3-208ENST00000433972 NEUROD2Q15784 382 aa19.41■□□□□ 0.7
RPUSD3-208ENST00000433972 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
RPUSD3-208ENST00000433972 LRP10Q7Z4F1 713 aa19.41■□□□□ 0.7
RPUSD3-208ENST00000433972 ZNF541Q9H0D2 1346 aa19.41■□□□□ 0.7
RPUSD3-208ENST00000433972 HOXB7P09629 217 aa19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 EPHX2P34913 555 aa19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 EAPPQ56P03 285 aaPredicted RBP19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 SLC10A5Q5PT55 438 aa19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 VPS33BQ9H267 617 aa19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 DDX21Q9NR30 783 aaKnown RBP eCLIP19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 SNED1Q8TER0 1413 aa19.4■□□□□ 0.7
RPUSD3-208ENST00000433972 SCN4AP35499 1836 aa19.39■□□□□ 0.7
RPUSD3-208ENST00000433972 NUP98P52948 1817 aa19.39■□□□□ 0.7
RPUSD3-208ENST00000433972 CHL1O00533 1208 aa19.39■□□□□ 0.69
RPUSD3-208ENST00000433972 LMOD1P29536 600 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-208ENST00000433972 COPS6Q7L5N1 327 aa19.39■□□□□ 0.69
RPUSD3-208ENST00000433972 LARGE2Q8N3Y3 721 aa19.39■□□□□ 0.69
RPUSD3-208ENST00000433972 CLEC11AQ9Y240 323 aa19.39■□□□□ 0.69
RPUSD3-208ENST00000433972 POTEIP0CG38 1075 aa19.38■□□□□ 0.69
RPUSD3-208ENST00000433972 POTEJP0CG39 1038 aa19.38■□□□□ 0.69
RPUSD3-208ENST00000433972 CCDC146Q8IYE0 955 aa19.38■□□□□ 0.69
RPUSD3-208ENST00000433972 SUPT20HQ8NEM7 779 aa19.38■□□□□ 0.69
RPUSD3-208ENST00000433972 LAS1LQ9Y4W2 734 aaKnown RBP19.38■□□□□ 0.69
RPUSD3-208ENST00000433972 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
RPUSD3-208ENST00000433972 PROSER3Q2NL68 480 aa19.37■□□□□ 0.69
RPUSD3-208ENST00000433972 NIM1KQ8IY84 436 aa19.37■□□□□ 0.69
RPUSD3-208ENST00000433972 XAGE3Q8WTP9 111 aa19.37■□□□□ 0.69
RPUSD3-208ENST00000433972 ATP6V0A2Q9Y487 856 aa19.37■□□□□ 0.69
RPUSD3-208ENST00000433972 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 PASKQ96RG2 1323 aa19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 BBOX1O75936 387 aa19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 HSPA1AP0DMV8 641 aaKnown RBP19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 HSPA1BP0DMV9 641 aaKnown RBP19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 TCIRG1Q13488 830 aa19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 HDGFL1Q5TGJ6 251 aa19.36■□□□□ 0.69
RPUSD3-208ENST00000433972 TMEM88BA6NKF7 163 aa19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 ANXA1P04083 346 aa19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 DDX46Q7L014 1031 aaKnown RBP19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 NLRP10Q86W26 655 aa19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 NECTIN2Q92692 538 aa19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 PRKRIP1Q9H875 184 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 TRMT112Q9UI30 125 aaKnown RBP19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 GJA3Q9Y6H8 435 aa19.35■□□□□ 0.69
RPUSD3-208ENST00000433972 TCERG1O14776 1098 aaKnown RBP19.34■□□□□ 0.69
RPUSD3-208ENST00000433972 PPIP5K2O43314 1243 aa19.34■□□□□ 0.69
RPUSD3-208ENST00000433972 CFAP44Q96MT7 982 aa19.34■□□□□ 0.69
RPUSD3-208ENST00000433972 ADAMTS8Q9UP79 889 aa19.34■□□□□ 0.69
RPUSD3-208ENST00000433972 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
RPUSD3-208ENST00000433972 PCNTO95613 3336 aa19.33■□□□□ 0.69
RPUSD3-208ENST00000433972 CNTNAP1P78357 1384 aa19.33■□□□□ 0.69
RPUSD3-208ENST00000433972 ABCC4O15439 1325 aa19.33■□□□□ 0.69
RPUSD3-208ENST00000433972 PLBD2Q8NHP8 589 aa19.33■□□□□ 0.68
RPUSD3-208ENST00000433972 CHMP4AQ9BY43 222 aa19.33■□□□□ 0.68
RPUSD3-208ENST00000433972 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
RPUSD3-208ENST00000433972 MKRN1Q9UHC7 482 aaKnown RBP19.33■□□□□ 0.68
RPUSD3-208ENST00000433972 ANP32CO43423 234 aa19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 ITGBL1O95965 494 aaPredicted RBP19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 DPP8Q6V1X1 898 aaPredicted RBP19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 C3orf67Q6ZVT6 689 aa19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 SP8Q8IXZ3 490 aa19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 CNTROBQ8N137 903 aa19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 HYPKQ9NX55 129 aa19.32■□□□□ 0.68
RPUSD3-208ENST00000433972 GRAPQ13588 217 aa19.31■□□□□ 0.68
RPUSD3-208ENST00000433972 COL13A1Q5TAT6 717 aaPredicted RBP19.31■□□□□ 0.68
RPUSD3-208ENST00000433972 ANKRD13DQ6ZTN6 518 aa19.31■□□□□ 0.68
RPUSD3-208ENST00000433972 USP50Q70EL3 339 aaPredicted RBP19.31■□□□□ 0.68
RPUSD3-208ENST00000433972 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
RPUSD3-208ENST00000433972 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
RPUSD3-208ENST00000433972 HCLS1P14317 486 aaPredicted RBP19.3■□□□□ 0.68
RPUSD3-208ENST00000433972 HSP90B1P14625 803 aaKnown RBP19.3■□□□□ 0.68
RPUSD3-208ENST00000433972 TNS4Q8IZW8 715 aa19.3■□□□□ 0.68
RPUSD3-208ENST00000433972 MPNDQ8N594 471 aa19.3■□□□□ 0.68
RPUSD3-208ENST00000433972 AOC3Q16853 763 aa19.29■□□□□ 0.68
RPUSD3-208ENST00000433972 KRT24Q2M2I5 525 aa19.29■□□□□ 0.68
RPUSD3-208ENST00000433972 ZNRF3Q9ULT6 936 aa19.29■□□□□ 0.68
RPUSD3-208ENST00000433972 CDHR2Q9BYE9 1310 aa19.28■□□□□ 0.68
RPUSD3-208ENST00000433972 SCNN1DP51172 638 aa19.28■□□□□ 0.68
RPUSD3-208ENST00000433972 DUSP27Q5VZP5 1158 aa19.28■□□□□ 0.68
RPUSD3-208ENST00000433972 MAP1SQ66K74 1059 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms