RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
SEC13-211ENST00000431352 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
SEC13-211ENST00000431352 MKRN1Q9UHC7 482 aaKnown RBP18.26■□□□□ 0.51
SEC13-211ENST00000431352 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
SEC13-211ENST00000431352 NTSR2O95665 410 aa18.25■□□□□ 0.51
SEC13-211ENST00000431352 HSPA1AP0DMV8 641 aaKnown RBP18.25■□□□□ 0.51
SEC13-211ENST00000431352 HSPA1BP0DMV9 641 aaKnown RBP18.25■□□□□ 0.51
SEC13-211ENST00000431352 LMOD3Q0VAK6 560 aa18.25■□□□□ 0.51
SEC13-211ENST00000431352 HACL1Q9UJ83 578 aa18.25■□□□□ 0.51
SEC13-211ENST00000431352 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
SEC13-211ENST00000431352 SCN4AP35499 1836 aa18.25■□□□□ 0.51
SEC13-211ENST00000431352 RIC1Q4ADV7 1423 aa18.24■□□□□ 0.51
SEC13-211ENST00000431352 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
SEC13-211ENST00000431352 PPEF1O14829 653 aaPredicted RBP18.24■□□□□ 0.51
SEC13-211ENST00000431352 AIMP1Q12904 312 aaKnown RBP18.24■□□□□ 0.51
SEC13-211ENST00000431352 PDIA6Q15084 440 aa18.24■□□□□ 0.51
SEC13-211ENST00000431352 JDP2Q8WYK2 163 aa18.24■□□□□ 0.51
SEC13-211ENST00000431352 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
SEC13-211ENST00000431352 CREBZFQ9NS37 354 aa18.24■□□□□ 0.51
SEC13-211ENST00000431352 COL4A5P29400 1685 aa18.23■□□□□ 0.51
SEC13-211ENST00000431352 EPHX2P34913 555 aa18.23■□□□□ 0.51
SEC13-211ENST00000431352 LRP10Q7Z4F1 713 aa18.23■□□□□ 0.51
SEC13-211ENST00000431352 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
SEC13-211ENST00000431352 PSMD1Q99460 953 aa18.23■□□□□ 0.51
SEC13-211ENST00000431352 LAS1LQ9Y4W2 734 aaKnown RBP18.23■□□□□ 0.51
SEC13-211ENST00000431352 GJA3Q9Y6H8 435 aa18.23■□□□□ 0.51
SEC13-211ENST00000431352 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
SEC13-211ENST00000431352 FZD9O00144 591 aa18.22■□□□□ 0.51
SEC13-211ENST00000431352 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
SEC13-211ENST00000431352 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
SEC13-211ENST00000431352 PARP10Q53GL7 1025 aa18.22■□□□□ 0.51
SEC13-211ENST00000431352 CC2D2BQ6DHV5 1058 aa18.22■□□□□ 0.51
SEC13-211ENST00000431352 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
SEC13-211ENST00000431352 UTP14AQ9BVJ6 771 aaKnown RBP18.22■□□□□ 0.51
SEC13-211ENST00000431352 CAPN15O75808 1086 aa18.21■□□□□ 0.51
SEC13-211ENST00000431352 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.51
SEC13-211ENST00000431352 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
SEC13-211ENST00000431352 XAGE3Q8WTP9 111 aa18.21■□□□□ 0.51
SEC13-211ENST00000431352 PASKQ96RG2 1323 aa18.21■□□□□ 0.51
SEC13-211ENST00000431352 PCNTO95613 3336 aa18.2■□□□□ 0.5
SEC13-211ENST00000431352 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
SEC13-211ENST00000431352 COPS6Q7L5N1 327 aa18.2■□□□□ 0.5
SEC13-211ENST00000431352 GPC2Q8N158 579 aa18.2■□□□□ 0.5
SEC13-211ENST00000431352 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
SEC13-211ENST00000431352 CRAMP1Q96RY5 1269 aa18.2■□□□□ 0.5
SEC13-211ENST00000431352 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
SEC13-211ENST00000431352 MAP1SQ66K74 1059 aaPredicted RBP18.19■□□□□ 0.5
SEC13-211ENST00000431352 TNS4Q8IZW8 715 aa18.19■□□□□ 0.5
SEC13-211ENST00000431352 ANKRD36CQ5JPF3 1778 aa18.18■□□□□ 0.5
SEC13-211ENST00000431352 HCLS1P14317 486 aaPredicted RBP18.18■□□□□ 0.5
SEC13-211ENST00000431352 PNMA8AQ86V59 439 aaPredicted RBP18.18■□□□□ 0.5
SEC13-211ENST00000431352 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
SEC13-211ENST00000431352 TMX4Q9H1E5 349 aaPredicted RBP18.18■□□□□ 0.5
SEC13-211ENST00000431352 ABCC4O15439 1325 aa18.18■□□□□ 0.5
SEC13-211ENST00000431352 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
SEC13-211ENST00000431352 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
SEC13-211ENST00000431352 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
SEC13-211ENST00000431352 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
SEC13-211ENST00000431352 NLRP10Q86W26 655 aa18.17■□□□□ 0.5
SEC13-211ENST00000431352 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
SEC13-211ENST00000431352 CHPF2Q9P2E5 772 aa18.17■□□□□ 0.5
SEC13-211ENST00000431352 TMEM88BA6NKF7 163 aa18.16■□□□□ 0.5
SEC13-211ENST00000431352 ITGBL1O95965 494 aaPredicted RBP18.16■□□□□ 0.5
SEC13-211ENST00000431352 AOC3Q16853 763 aa18.16■□□□□ 0.5
SEC13-211ENST00000431352 HSP90AB3PQ58FF7 597 aa18.16■□□□□ 0.5
SEC13-211ENST00000431352 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
SEC13-211ENST00000431352 TRMT112Q9UI30 125 aaKnown RBP18.16■□□□□ 0.5
SEC13-211ENST00000431352 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
SEC13-211ENST00000431352 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
SEC13-211ENST00000431352 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
SEC13-211ENST00000431352 CHL1O00533 1208 aa18.15■□□□□ 0.5
SEC13-211ENST00000431352 GRIPAP1Q4V328 841 aa18.15■□□□□ 0.5
SEC13-211ENST00000431352 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
SEC13-211ENST00000431352 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.53e-7■■■□□ 17.1
SEC13-211ENST00000431352 LAMB2P55268 1798 aa18.14■□□□□ 0.5
SEC13-211ENST00000431352 EPS15P42566 896 aa18.14■□□□□ 0.49
SEC13-211ENST00000431352 SCNN1DP51172 638 aa18.14■□□□□ 0.49
SEC13-211ENST00000431352 TCIRG1Q13488 830 aa18.14■□□□□ 0.49
SEC13-211ENST00000431352 SLC10A5Q5PT55 438 aa18.14■□□□□ 0.49
SEC13-211ENST00000431352 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
SEC13-211ENST00000431352 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
SEC13-211ENST00000431352 DDX46Q7L014 1031 aaKnown RBP18.13■□□□□ 0.49
SEC13-211ENST00000431352 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
SEC13-211ENST00000431352 VEGFBP49765 207 aa18.12■□□□□ 0.49
SEC13-211ENST00000431352 ABT1Q9ULW3 272 aaKnown RBP18.12■□□□□ 0.49
SEC13-211ENST00000431352 SUPT20HQ8NEM7 779 aa18.11■□□□□ 0.49
SEC13-211ENST00000431352 ATP5J2-PTCD1G3V325 749 aa18.1■□□□□ 0.49
SEC13-211ENST00000431352 FOXN1O15353 648 aa18.1■□□□□ 0.49
SEC13-211ENST00000431352 FMR1Q06787 632 aaKnown RBP eCLIP18.1■□□□□ 0.49
SEC13-211ENST00000431352 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
SEC13-211ENST00000431352 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
SEC13-211ENST00000431352 MPNDQ8N594 471 aa18.1■□□□□ 0.49
SEC13-211ENST00000431352 BBOX1O75936 387 aa18.09■□□□□ 0.49
SEC13-211ENST00000431352 GRAPQ13588 217 aa18.09■□□□□ 0.49
SEC13-211ENST00000431352 SP8Q8IXZ3 490 aa18.09■□□□□ 0.49
SEC13-211ENST00000431352 PLBD2Q8NHP8 589 aa18.09■□□□□ 0.49
SEC13-211ENST00000431352 GRAPLQ8TC17 118 aaPredicted RBP18.09■□□□□ 0.49
SEC13-211ENST00000431352 AIDAQ96BJ3 306 aa18.09■□□□□ 0.49
SEC13-211ENST00000431352 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
SEC13-211ENST00000431352 ZNRF3Q9ULT6 936 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms