RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
BEND3-202ENST00000429433 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
BEND3-202ENST00000429433 UBE4AQ14139 1066 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 GOLGA8AA7E2F4 631 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 GOLGA8BA8MQT2 603 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 SKILP12757 684 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 CALML4Q96GE6 196 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 ZC3H6P61129 1189 aaKnown RBP12.05□□□□□ -0.48
BEND3-202ENST00000429433 CCDC77Q9BR77 488 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 TMCO5BA8MYB1 307 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 HDAC1Q13547 482 aaPredicted RBP12.05□□□□□ -0.48
BEND3-202ENST00000429433 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 ANKS4BQ8N8V4 417 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 KCNG4Q8TDN1 519 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 JADE2Q9NQC1 790 aa12.05□□□□□ -0.48
BEND3-202ENST00000429433 TTC21AQ8NDW8 1320 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 EBAG9O00559 213 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
BEND3-202ENST00000429433 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 EHMT1Q9H9B1 1298 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 NSD2O96028 1365 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 PTCD1O75127 700 aaKnown RBP12.04□□□□□ -0.48
BEND3-202ENST00000429433 GOLGA1Q92805 767 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 IARSP41252 1262 aaKnown RBP12.04□□□□□ -0.48
BEND3-202ENST00000429433 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 METTL24Q5JXM2 366 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 FERMT1Q9BQL6 677 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 CDK13Q14004 1512 aaKnown RBP12.04□□□□□ -0.48
BEND3-202ENST00000429433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.04□□□□□ -0.48
BEND3-202ENST00000429433 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
BEND3-202ENST00000429433 MPHOSPH10O00566 681 aaKnown RBP12.03□□□□□ -0.48
BEND3-202ENST00000429433 MATR3P43243 847 aaKnown RBP eCLIP12.03□□□□□ -0.48
BEND3-202ENST00000429433 NME9Q86XW9 330 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 SREK1Q8WXA9 508 aaKnown RBP12.03□□□□□ -0.48
BEND3-202ENST00000429433 CTNNBL1Q8WYA6 563 aaPredicted RBP12.03□□□□□ -0.48
BEND3-202ENST00000429433 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 AKR1B10O60218 316 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 TTC12Q9H892 705 aaPredicted RBP12.03□□□□□ -0.48
BEND3-202ENST00000429433 N4BP3O15049 544 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 TTC22Q5TAA0 569 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 CCDC141Q6ZP82 1450 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 A6NNZ2 444 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 CTNNA2P26232 953 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 UBASH3AP57075 661 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 TUBB8Q3ZCM7 444 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 KIF5BP33176 963 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 CCDC6Q16204 474 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 CATIPQ7Z7H3 387 aa12.03□□□□□ -0.48
BEND3-202ENST00000429433 POLR3DP05423 398 aaPredicted RBP12.02□□□□□ -0.48
BEND3-202ENST00000429433 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.48
BEND3-202ENST00000429433 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.48
BEND3-202ENST00000429433 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.48
BEND3-202ENST00000429433 CFAP57Q96MR6 1250 aa12.02□□□□□ -0.48
BEND3-202ENST00000429433 KIF4AO95239 1232 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 FERP16591 822 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 MSL1Q68DK7 614 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 RSPH14Q9UHP6 348 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 TROQ12816 1431 aaPredicted RBP12.02□□□□□ -0.49
BEND3-202ENST00000429433 TACC1O75410 805 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 USP5P45974 858 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 NLRP5P59047 1200 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 HAND2P61296 217 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 KRT83P78385 493 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 TAF7Q15545 349 aaPredicted RBP12.02□□□□□ -0.49
BEND3-202ENST00000429433 IKBKGQ9Y6K9 419 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 ACTN2P35609 894 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 CAVIN4Q5BKX8 364 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
BEND3-202ENST00000429433 C17orf53Q8N3J3 647 aaPredicted RBP12.02□□□□□ -0.49
BEND3-202ENST00000429433 ORC3Q9UBD5 711 aaPredicted RBP12.02□□□□□ -0.49
BEND3-202ENST00000429433 IFIT3O14879 490 aaKnown RBP12.01□□□□□ -0.49
BEND3-202ENST00000429433 UBA7P41226 1012 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 CCDC121Q6ZUS5 278 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 CCDC186Q7Z3E2 898 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 NEK1Q96PY6 1258 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 STARD3NLO95772 234 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 NOP2P46087 812 aaKnown RBP12.01□□□□□ -0.49
BEND3-202ENST00000429433 USP16Q9Y5T5 823 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 CAPN2P17655 700 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 SYKP43405 635 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 TSNARE1Q96NA8 513 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 TTC31Q49AM3 519 aaPredicted RBP12.01□□□□□ -0.49
BEND3-202ENST00000429433 DAAM2Q86T65 1068 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 LMBR1Q8WVP7 490 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 MRPS27Q92552 414 aaKnown RBP12.01□□□□□ -0.49
BEND3-202ENST00000429433 CUL5Q93034 780 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 TMX3Q96JJ7 454 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 SNRKQ9NRH2 765 aa12.01□□□□□ -0.49
BEND3-202ENST00000429433 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms