RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 TAF1DQ9H5J8 278 aaPredicted RBP17.15■□□□□ 0.34
DEPDC7-203ENST00000427755 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
DEPDC7-203ENST00000427755 DICER1Q9UPY3 1922 aaKnown RBP17.14■□□□□ 0.33
DEPDC7-203ENST00000427755 IQCA1LA6NCM1 817 aa17.14■□□□□ 0.33
DEPDC7-203ENST00000427755 FZD9O00144 591 aa17.14■□□□□ 0.33
DEPDC7-203ENST00000427755 PARP10Q53GL7 1025 aa17.14■□□□□ 0.33
DEPDC7-203ENST00000427755 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
DEPDC7-203ENST00000427755 CHL1O00533 1208 aa17.13■□□□□ 0.33
DEPDC7-203ENST00000427755 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
DEPDC7-203ENST00000427755 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
DEPDC7-203ENST00000427755 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
DEPDC7-203ENST00000427755 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
DEPDC7-203ENST00000427755 TRIM35Q9UPQ4 493 aa17.13■□□□□ 0.33
DEPDC7-203ENST00000427755 KRT24Q2M2I5 525 aa17.12■□□□□ 0.33
DEPDC7-203ENST00000427755 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
DEPDC7-203ENST00000427755 LDHDQ86WU2 507 aa17.12■□□□□ 0.33
DEPDC7-203ENST00000427755 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 NECTIN2Q92692 538 aa17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 CREBZFQ9NS37 354 aa17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
DEPDC7-203ENST00000427755 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
DEPDC7-203ENST00000427755 HACL1Q9UJ83 578 aa17.1■□□□□ 0.33
DEPDC7-203ENST00000427755 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
DEPDC7-203ENST00000427755 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
DEPDC7-203ENST00000427755 COL4A5P29400 1685 aa17.1■□□□□ 0.33
DEPDC7-203ENST00000427755 PPEF1O14829 653 aaPredicted RBP17.09■□□□□ 0.33
DEPDC7-203ENST00000427755 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
DEPDC7-203ENST00000427755 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
DEPDC7-203ENST00000427755 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
DEPDC7-203ENST00000427755 RNF123Q5XPI4 1314 aa17.09■□□□□ 0.33
DEPDC7-203ENST00000427755 NUP98P52948 1817 aa17.09■□□□□ 0.33
DEPDC7-203ENST00000427755 ITGBL1O95965 494 aaPredicted RBP17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 EPHX2P34913 555 aa17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 COL13A1Q5TAT6 717 aaPredicted RBP17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 NLRP10Q86W26 655 aa17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 GPC2Q8N158 579 aa17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
DEPDC7-203ENST00000427755 TCIRG1Q13488 830 aa17.07■□□□□ 0.32
DEPDC7-203ENST00000427755 EAPPQ56P03 285 aaPredicted RBP17.07■□□□□ 0.32
DEPDC7-203ENST00000427755 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
DEPDC7-203ENST00000427755 CHPF2Q9P2E5 772 aa17.07■□□□□ 0.32
DEPDC7-203ENST00000427755 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
DEPDC7-203ENST00000427755 ABCC4O15439 1325 aa17.06■□□□□ 0.32
DEPDC7-203ENST00000427755 TCERG1O14776 1098 aaKnown RBP17.06■□□□□ 0.32
DEPDC7-203ENST00000427755 HSPA1AP0DMV8 641 aaKnown RBP17.06■□□□□ 0.32
DEPDC7-203ENST00000427755 HSPA1BP0DMV9 641 aaKnown RBP17.06■□□□□ 0.32
DEPDC7-203ENST00000427755 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
DEPDC7-203ENST00000427755 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
DEPDC7-203ENST00000427755 HOXB7P09629 217 aa17.05■□□□□ 0.32
DEPDC7-203ENST00000427755 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
DEPDC7-203ENST00000427755 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
DEPDC7-203ENST00000427755 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
DEPDC7-203ENST00000427755 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
DEPDC7-203ENST00000427755 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
DEPDC7-203ENST00000427755 HDGFL1Q5TGJ6 251 aa17.04■□□□□ 0.32
DEPDC7-203ENST00000427755 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
DEPDC7-203ENST00000427755 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
DEPDC7-203ENST00000427755 SCN4AP35499 1836 aa17.04■□□□□ 0.32
DEPDC7-203ENST00000427755 CNTNAP1P78357 1384 aa17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 SH3TC1Q8TE82 1336 aa17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 ADAMTSL1Q8N6G6 1762 aa17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 SCNN1DP51172 638 aa17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 TRMT112Q9UI30 125 aaKnown RBP17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
DEPDC7-203ENST00000427755 TMEM88BA6NKF7 163 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 PPIP5K2O43314 1243 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 BBOX1O75936 387 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 AOC3Q16853 763 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 MAP1SQ66K74 1059 aaPredicted RBP17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 SP8Q8IXZ3 490 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 CNTROBQ8N137 903 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 MBIPQ9NS73 344 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
DEPDC7-203ENST00000427755 EPS15P42566 896 aa17.01■□□□□ 0.31
DEPDC7-203ENST00000427755 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
DEPDC7-203ENST00000427755 ANKRD13DQ6ZTN6 518 aa17.01■□□□□ 0.31
DEPDC7-203ENST00000427755 ISCA1Q9BUE6 129 aa17.01■□□□□ 0.31
DEPDC7-203ENST00000427755 DBF4Q9UBU7 674 aaPredicted RBP17.01■□□□□ 0.31
DEPDC7-203ENST00000427755 PCNTO95613 3336 aa17.01■□□□□ 0.31
DEPDC7-203ENST00000427755 GRAPQ13588 217 aa17■□□□□ 0.31
DEPDC7-203ENST00000427755 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
DEPDC7-203ENST00000427755 ZNF428Q96B54 188 aa17■□□□□ 0.31
DEPDC7-203ENST00000427755 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
DEPDC7-203ENST00000427755 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
DEPDC7-203ENST00000427755 APAF1O14727 1248 aa16.99■□□□□ 0.31
DEPDC7-203ENST00000427755 LMOD1P29536 600 aaPredicted RBP16.99■□□□□ 0.31
DEPDC7-203ENST00000427755 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
DEPDC7-203ENST00000427755 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
DEPDC7-203ENST00000427755 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
DEPDC7-203ENST00000427755 VEGFBP49765 207 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms